Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS05260

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,163,834	+		HSERO_RS05255	0.17	-0.4
1,163,944	-		HSERO_RS05255	0.27	-0.4
1,164,084	-		HSERO_RS05255	0.41	+0.5
1,164,121	+				+0.4
1,164,129	-		HSERO_RS05255	0.45	+0.9
1,164,213	+		HSERO_RS05255	0.53	+0.6
1,164,334	-		HSERO_RS05255	0.65	+3.1
1,164,336	+		HSERO_RS05255	0.65	+0.2
1,164,582	-		HSERO_RS05255	0.88	+0.3
1,164,759	-				-0.8
1,164,817	+				-1.0
1,164,858	+				+1.9
1,164,877	+				+1.9
1,164,906	+		HSERO_RS05260	0.12	+2.1
1,164,937	-		HSERO_RS05260	0.16	+0.1
1,165,025	-		HSERO_RS05260	0.25	+0.1
1,165,032	+		HSERO_RS05260	0.26	-0.9
1,165,267	-		HSERO_RS05260	0.51	+0.6
1,165,342	-		HSERO_RS05260	0.59	+0.8
1,165,374	+		HSERO_RS05260	0.62	+0.2
1,165,405	+		HSERO_RS05260	0.65	+1.3
1,165,405	-		HSERO_RS05260	0.65	+0.0
1,165,406	-		HSERO_RS05260	0.66	+0.3
1,165,410	+		HSERO_RS05260	0.66	-0.3
1,165,541	-		HSERO_RS05260	0.80	+2.2
1,165,581	-		HSERO_RS05260	0.84	-0.5
1,165,589	+		HSERO_RS05260	0.85	-1.6
1,165,652	-				-0.2
1,165,683	+				+1.4
1,165,736	+				-0.0
1,165,744	-				+0.1
1,165,744	-				+0.4
1,165,744	-				+0.3
1,165,797	+				-1.0
1,165,805	-				-0.1
1,165,905	+				-1.9
1,166,101	+		HSERO_RS05265	0.29	-0.6
1,166,440	+		HSERO_RS05265	0.68	-0.4
1,166,516	+		HSERO_RS05265	0.76	-0.6
1,166,565	+		HSERO_RS05265	0.82	+0.0
1,166,679	+				+0.1
1,166,685	-				-0.2
1,166,687	-				+0.5
1,166,710	+				+0.9
1,166,713	-				-0.6
1,166,715	+				+0.9
1,166,718	-				+0.5