Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS04750

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,039,679	+		HSERO_RS04745	0.62	+0.8
1,039,743	+		HSERO_RS04745	0.65	-0.0
1,039,840	+		HSERO_RS04745	0.70	+1.1
1,039,855	+		HSERO_RS04745	0.70	+0.2
1,039,958	-				+0.2
1,040,171	-		HSERO_RS04745	0.85	-0.7
1,040,234	-		HSERO_RS04745	0.88	-0.4
1,040,234	-		HSERO_RS04745	0.88	-0.2
1,040,406	+				+0.7
1,040,414	-				-0.3
1,040,414	-				-0.3
1,040,624	-				-1.7
1,040,755	-		HSERO_RS04750	0.12	-1.5
1,040,755	-		HSERO_RS04750	0.12	-0.3
1,040,806	+		HSERO_RS04750	0.16	-0.3
1,040,806	+		HSERO_RS04750	0.16	+0.0
1,040,814	-		HSERO_RS04750	0.17	-0.7
1,040,814	-		HSERO_RS04750	0.17	-0.2
1,041,250	-		HSERO_RS04750	0.55	-0.9
1,041,287	-		HSERO_RS04750	0.59	-0.2
1,041,345	+		HSERO_RS04750	0.64	+0.4