Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS04735

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,034,628	-				-0.2
1,034,805	-		HSERO_RS04730	0.25	-0.8
1,035,066	+		HSERO_RS04730	0.54	-0.6
1,035,117	+		HSERO_RS04730	0.60	-0.4
1,035,177	-		HSERO_RS04730	0.67	-0.0
1,035,309	+		HSERO_RS04730	0.81	+0.3
1,035,506	-				+0.2
1,035,638	-				+1.5
1,035,643	-				-0.9
1,035,650	-				+0.8
1,035,709	+		HSERO_RS04735	0.13	+0.6
1,035,719	-		HSERO_RS04735	0.14	+0.3
1,035,755	-		HSERO_RS04735	0.17	+0.1
1,035,924	-		HSERO_RS04735	0.30	+0.3
1,035,924	-		HSERO_RS04735	0.30	+0.3
1,036,017	+		HSERO_RS04735	0.38	+0.2
1,036,098	+		HSERO_RS04735	0.45	+0.4
1,036,099	+		HSERO_RS04735	0.45	-0.4
1,036,123	-		HSERO_RS04735	0.47	+0.4
1,036,193	+		HSERO_RS04735	0.52	+0.2
1,036,261	+		HSERO_RS04735	0.58	-0.7
1,036,554	+		HSERO_RS04735	0.82	+0.8
1,036,628	-		HSERO_RS04735	0.88	+1.8
1,036,630	-		HSERO_RS04735	0.88	-0.1
1,036,789	+				+1.3
1,036,789	+				-0.1
1,036,805	+				+0.2
1,036,878	+				+0.3
1,036,896	+				-0.1
1,036,952	+				+0.6
1,036,954	+				-0.8
1,036,960	-				-0.4
1,036,991	+				-0.0
1,037,097	+				+0.3
1,037,107	+				-0.5
1,037,139	-				+1.6
1,037,353	-				-0.2
1,037,424	+				-0.1
1,037,622	+		HSERO_RS04740	0.31	+0.2
1,037,696	-		HSERO_RS04740	0.39	+1.8
1,037,702	+		HSERO_RS04740	0.39	+0.0