Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15370

Experiment: Minimal media pH9

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_15365 and AO356_15370 are separated by 39 nucleotidesAO356_15370 and AO356_15375 are separated by 90 nucleotides AO356_15365: AO356_15365 - DNA polymerase III subunit delta, at 3,479,214 to 3,480,251 _15365 AO356_15370: AO356_15370 - hypothetical protein, at 3,480,291 to 3,480,896 _15370 AO356_15375: AO356_15375 - leucine--tRNA ligase, at 3,480,987 to 3,483,593 _15375 Position (kb) 3480 3481Strain fitness (log2 ratio) -1 0 1at 3480.252 kb on - strandat 3480.252 kb on - strandat 3480.252 kb on - strandat 3480.293 kb on - strandat 3480.293 kb on - strandat 3480.919 kb on - strandat 3480.951 kb on - strandat 3480.951 kb on - strandat 3480.951 kb on - strandat 3480.951 kb on - strandat 3480.989 kb on - strandat 3480.989 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Minimal media pH9
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3,480,252 - +1.1
3,480,252 - +0.4
3,480,252 - -0.8
3,480,293 - +0.1
3,480,293 - +1.5
3,480,919 - -0.0
3,480,951 - +0.2
3,480,951 - +0.1
3,480,951 - -0.9
3,480,951 - +1.2
3,480,989 - -0.6
3,480,989 - -0.8

Or see this region's nucleotide sequence