Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29020 and AO353_29025 are separated by 141 nucleotides AO353_29025 and AO353_29030 are separated by 17 nucleotides
AO353_29020: AO353_29020 - amidohydrolase, at 6,306,925 to 6,308,094
_29020
AO353_29025: AO353_29025 - LysR family transcriptional regulator, at 6,308,236 to 6,309,189
_29025
AO353_29030: AO353_29030 - GntR family transcriptional regulator, at 6,309,207 to 6,309,917
_29030
Position (kb)
6308
6309
6310 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 6307.318 kb on + strand, within AO353_29020 at 6307.319 kb on - strand, within AO353_29020 at 6307.486 kb on - strand, within AO353_29020 at 6307.486 kb on - strand, within AO353_29020 at 6307.565 kb on + strand, within AO353_29020 at 6307.743 kb on - strand, within AO353_29020 at 6307.743 kb on - strand, within AO353_29020 at 6307.770 kb on + strand, within AO353_29020 at 6307.771 kb on - strand, within AO353_29020 at 6307.820 kb on + strand, within AO353_29020 at 6307.820 kb on + strand, within AO353_29020 at 6307.821 kb on - strand, within AO353_29020 at 6307.821 kb on - strand, within AO353_29020 at 6308.025 kb on + strand at 6308.026 kb on - strand at 6308.116 kb on + strand at 6308.116 kb on + strand at 6308.116 kb on + strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.161 kb on + strand at 6308.161 kb on + strand at 6308.175 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.679 kb on + strand, within AO353_29025 at 6308.818 kb on + strand, within AO353_29025 at 6308.819 kb on - strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6309.037 kb on - strand, within AO353_29025 at 6309.037 kb on - strand, within AO353_29025 at 6309.185 kb on + strand at 6309.185 kb on + strand at 6309.185 kb on + strand at 6309.186 kb on - strand at 6309.193 kb on - strand at 6309.221 kb on + strand at 6309.221 kb on + strand at 6309.221 kb on + strand at 6309.221 kb on + strand at 6309.387 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.409 kb on + strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.410 kb on - strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.427 kb on + strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.428 kb on - strand, within AO353_29030 at 6309.431 kb on + strand, within AO353_29030 at 6309.431 kb on + strand, within AO353_29030 at 6309.432 kb on - strand, within AO353_29030 at 6309.432 kb on - strand, within AO353_29030 at 6309.514 kb on + strand, within AO353_29030 at 6309.515 kb on - strand, within AO353_29030 at 6309.950 kb on + strand at 6309.950 kb on + strand at 6309.951 kb on - strand at 6309.951 kb on - strand at 6309.951 kb on - strand at 6309.954 kb on - strand at 6309.962 kb on + strand at 6309.962 kb on + strand at 6309.963 kb on - strand at 6309.963 kb on - strand at 6309.963 kb on - strand at 6309.963 kb on - strand at 6309.963 kb on - strand at 6310.027 kb on + strand at 6310.027 kb on + strand at 6310.027 kb on + strand at 6310.177 kb on - strand at 6310.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 6,307,318 + AO353_29020 0.34 -1.0 6,307,319 - AO353_29020 0.34 -0.5 6,307,486 - AO353_29020 0.48 -1.0 6,307,486 - AO353_29020 0.48 +0.9 6,307,565 + AO353_29020 0.55 -1.3 6,307,743 - AO353_29020 0.70 -0.8 6,307,743 - AO353_29020 0.70 +0.7 6,307,770 + AO353_29020 0.72 +0.1 6,307,771 - AO353_29020 0.72 -0.2 6,307,820 + AO353_29020 0.76 -0.3 6,307,820 + AO353_29020 0.76 -0.9 6,307,821 - AO353_29020 0.77 +4.1 6,307,821 - AO353_29020 0.77 -1.0 6,308,025 + +1.9 6,308,026 - +1.3 6,308,116 + +0.5 6,308,116 + +0.6 6,308,116 + -0.8 6,308,117 - -0.1 6,308,117 - -0.8 6,308,117 - -0.4 6,308,117 - -0.7 6,308,161 + -0.6 6,308,161 + -0.7 6,308,175 + -0.0 6,308,252 + -1.5 6,308,252 + +1.0 6,308,252 + -0.5 6,308,252 + +1.1 6,308,253 - +0.5 6,308,253 - +2.0 6,308,253 - +0.4 6,308,253 - +0.1 6,308,253 - -0.7 6,308,253 - -0.5 6,308,679 + AO353_29025 0.46 -0.2 6,308,818 + AO353_29025 0.61 -0.1 6,308,819 - AO353_29025 0.61 +0.9 6,308,952 + AO353_29025 0.75 +2.6 6,308,952 + AO353_29025 0.75 +1.0 6,308,952 + AO353_29025 0.75 -1.7 6,308,952 + AO353_29025 0.75 +1.3 6,308,953 - AO353_29025 0.75 -0.7 6,308,953 - AO353_29025 0.75 +0.9 6,308,953 - AO353_29025 0.75 -0.0 6,309,037 - AO353_29025 0.84 +0.4 6,309,037 - AO353_29025 0.84 +0.5 6,309,185 + -0.9 6,309,185 + +0.1 6,309,185 + +0.4 6,309,186 - +0.4 6,309,193 - +0.5 6,309,221 + -1.6 6,309,221 + -1.4 6,309,221 + -0.1 6,309,221 + +0.6 6,309,387 + AO353_29030 0.25 +1.8 6,309,409 + AO353_29030 0.28 +0.9 6,309,409 + AO353_29030 0.28 -0.9 6,309,409 + AO353_29030 0.28 +0.2 6,309,409 + AO353_29030 0.28 -0.2 6,309,409 + AO353_29030 0.28 -1.9 6,309,409 + AO353_29030 0.28 -0.5 6,309,409 + AO353_29030 0.28 +0.1 6,309,409 + AO353_29030 0.28 +0.7 6,309,409 + AO353_29030 0.28 +0.7 6,309,409 + AO353_29030 0.28 +0.3 6,309,409 + AO353_29030 0.28 +0.5 6,309,409 + AO353_29030 0.28 -1.7 6,309,410 - AO353_29030 0.29 -0.2 6,309,410 - AO353_29030 0.29 +0.6 6,309,410 - AO353_29030 0.29 -1.5 6,309,410 - AO353_29030 0.29 +0.3 6,309,410 - AO353_29030 0.29 +0.0 6,309,410 - AO353_29030 0.29 -0.4 6,309,410 - AO353_29030 0.29 -0.7 6,309,410 - AO353_29030 0.29 -0.2 6,309,410 - AO353_29030 0.29 +1.9 6,309,410 - AO353_29030 0.29 +0.3 6,309,427 + AO353_29030 0.31 +0.7 6,309,427 + AO353_29030 0.31 +0.0 6,309,427 + AO353_29030 0.31 -1.5 6,309,427 + AO353_29030 0.31 -1.3 6,309,427 + AO353_29030 0.31 -0.6 6,309,427 + AO353_29030 0.31 +1.3 6,309,427 + AO353_29030 0.31 +0.2 6,309,428 - AO353_29030 0.31 -0.9 6,309,428 - AO353_29030 0.31 +0.8 6,309,428 - AO353_29030 0.31 -0.1 6,309,428 - AO353_29030 0.31 -0.5 6,309,428 - AO353_29030 0.31 -0.1 6,309,428 - AO353_29030 0.31 +0.9 6,309,428 - AO353_29030 0.31 -1.6 6,309,428 - AO353_29030 0.31 +0.3 6,309,428 - AO353_29030 0.31 +0.5 6,309,431 + AO353_29030 0.32 -0.2 6,309,431 + AO353_29030 0.32 +1.3 6,309,432 - AO353_29030 0.32 +0.6 6,309,432 - AO353_29030 0.32 -0.5 6,309,514 + AO353_29030 0.43 +1.1 6,309,515 - AO353_29030 0.43 -0.3 6,309,950 + -0.1 6,309,950 + +0.7 6,309,951 - +0.2 6,309,951 - +0.1 6,309,951 - +0.3 6,309,954 - +0.7 6,309,962 + -1.0 6,309,962 + -2.2 6,309,963 - -0.5 6,309,963 - +0.3 6,309,963 - -0.9 6,309,963 - -0.7 6,309,963 - +1.3 6,310,027 + -0.0 6,310,027 + -0.7 6,310,027 + -0.7 6,310,177 - +1.4 6,310,185 - -0.4
Or see this region's nucleotide sequence