Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26015 and AO353_26020 are separated by 134 nucleotides AO353_26020 and AO353_26025 are separated by 89 nucleotides AO353_26025 and AO353_26030 are separated by 153 nucleotides AO353_26030 and AO353_26035 are separated by 92 nucleotides
AO353_26015: AO353_26015 - hypothetical protein, at 5,732,737 to 5,732,994
_26015
AO353_26020: AO353_26020 - hypothetical protein, at 5,733,129 to 5,733,389
_26020
AO353_26025: AO353_26025 - hypothetical protein, at 5,733,479 to 5,733,694
_26025
AO353_26030: AO353_26030 - NAD(P)H dehydrogenase, at 5,733,848 to 5,734,468
_26030
AO353_26035: AO353_26035 - TetR family transcriptional regulator, at 5,734,561 to 5,735,208
_26035
Position (kb)
5733
5734
5735 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5732.893 kb on + strand, within AO353_26015 at 5733.027 kb on - strand at 5733.041 kb on + strand at 5733.048 kb on - strand at 5733.224 kb on + strand, within AO353_26020 at 5733.350 kb on - strand, within AO353_26020 at 5733.401 kb on - strand at 5733.421 kb on - strand at 5733.435 kb on + strand at 5733.435 kb on + strand at 5733.435 kb on + strand at 5733.435 kb on + strand at 5733.436 kb on - strand at 5733.436 kb on - strand at 5733.436 kb on - strand at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.511 kb on + strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.512 kb on - strand, within AO353_26025 at 5733.641 kb on - strand, within AO353_26025 at 5733.667 kb on + strand, within AO353_26025 at 5733.667 kb on + strand, within AO353_26025 at 5733.667 kb on + strand, within AO353_26025 at 5733.668 kb on - strand, within AO353_26025 at 5733.728 kb on - strand at 5733.728 kb on - strand at 5733.728 kb on - strand at 5733.728 kb on - strand at 5733.728 kb on - strand at 5733.729 kb on + strand at 5733.730 kb on - strand at 5733.841 kb on + strand at 5733.841 kb on + strand at 5733.841 kb on + strand at 5733.841 kb on + strand at 5733.841 kb on + strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.842 kb on - strand at 5733.851 kb on + strand at 5733.851 kb on + strand at 5733.851 kb on + strand at 5733.852 kb on - strand at 5733.852 kb on - strand at 5733.852 kb on - strand at 5733.854 kb on + strand at 5733.855 kb on - strand at 5733.855 kb on - strand at 5733.855 kb on - strand at 5733.883 kb on + strand at 5733.883 kb on + strand at 5733.883 kb on + strand at 5733.884 kb on - strand at 5733.884 kb on - strand at 5733.886 kb on + strand at 5733.886 kb on + strand at 5733.886 kb on + strand at 5733.886 kb on + strand at 5733.887 kb on - strand at 5733.887 kb on - strand at 5733.890 kb on + strand at 5733.890 kb on + strand at 5733.890 kb on + strand at 5733.891 kb on - strand at 5733.891 kb on - strand at 5733.891 kb on - strand at 5733.990 kb on + strand, within AO353_26030 at 5733.991 kb on - strand at 5734.035 kb on + strand, within AO353_26030 at 5734.036 kb on - strand, within AO353_26030 at 5734.050 kb on + strand, within AO353_26030 at 5734.050 kb on + strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.051 kb on - strand, within AO353_26030 at 5734.094 kb on + strand, within AO353_26030 at 5734.094 kb on + strand, within AO353_26030 at 5734.094 kb on + strand, within AO353_26030 at 5734.095 kb on - strand, within AO353_26030 at 5734.095 kb on - strand, within AO353_26030 at 5734.095 kb on - strand, within AO353_26030 at 5734.095 kb on - strand, within AO353_26030 at 5734.184 kb on + strand, within AO353_26030 at 5734.195 kb on + strand, within AO353_26030 at 5734.195 kb on + strand, within AO353_26030 at 5734.195 kb on + strand, within AO353_26030 at 5734.195 kb on + strand, within AO353_26030 at 5734.196 kb on - strand, within AO353_26030 at 5734.298 kb on + strand, within AO353_26030 at 5734.298 kb on + strand, within AO353_26030 at 5734.298 kb on + strand, within AO353_26030 at 5734.298 kb on + strand, within AO353_26030 at 5734.298 kb on + strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.299 kb on - strand, within AO353_26030 at 5734.388 kb on + strand, within AO353_26030 at 5734.456 kb on + strand at 5734.485 kb on - strand at 5734.512 kb on - strand at 5734.512 kb on - strand at 5734.515 kb on + strand at 5734.554 kb on + strand at 5734.578 kb on + strand at 5734.578 kb on + strand at 5734.578 kb on + strand at 5734.579 kb on - strand at 5734.620 kb on + strand at 5734.621 kb on - strand at 5734.726 kb on - strand, within AO353_26035 at 5734.742 kb on - strand, within AO353_26035 at 5734.784 kb on - strand, within AO353_26035 at 5734.784 kb on - strand, within AO353_26035 at 5734.815 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.845 kb on + strand, within AO353_26035 at 5734.846 kb on - strand, within AO353_26035 at 5734.846 kb on - strand, within AO353_26035 at 5734.846 kb on - strand, within AO353_26035 at 5734.850 kb on + strand, within AO353_26035 at 5734.850 kb on + strand, within AO353_26035 at 5734.882 kb on + strand, within AO353_26035 at 5734.882 kb on + strand, within AO353_26035 at 5734.882 kb on + strand, within AO353_26035 at 5734.883 kb on - strand, within AO353_26035 at 5734.883 kb on - strand, within AO353_26035 at 5734.916 kb on + strand, within AO353_26035 at 5734.916 kb on + strand, within AO353_26035 at 5734.916 kb on + strand, within AO353_26035 at 5734.916 kb on + strand, within AO353_26035 at 5734.995 kb on + strand, within AO353_26035 at 5734.995 kb on + strand, within AO353_26035 at 5734.995 kb on + strand, within AO353_26035 at 5734.996 kb on - strand, within AO353_26035 at 5734.996 kb on - strand, within AO353_26035 at 5734.996 kb on - strand, within AO353_26035 at 5734.996 kb on - strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.037 kb on + strand, within AO353_26035 at 5735.038 kb on - strand, within AO353_26035 at 5735.258 kb on + strand at 5735.292 kb on + strand at 5735.292 kb on + strand at 5735.292 kb on + strand at 5735.293 kb on - strand at 5735.293 kb on - strand at 5735.293 kb on - strand at 5735.293 kb on - strand at 5735.293 kb on - strand at 5735.293 kb on - strand at 5735.367 kb on + strand at 5735.367 kb on + strand at 5735.368 kb on - strand at 5735.368 kb on - strand at 5735.429 kb on + strand at 5735.429 kb on + strand at 5735.430 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 5,732,893 + AO353_26015 0.60 -0.5 5,733,027 - -0.9 5,733,041 + -0.5 5,733,048 - -0.4 5,733,224 + AO353_26020 0.36 +0.3 5,733,350 - AO353_26020 0.85 -1.1 5,733,401 - +2.0 5,733,421 - +1.6 5,733,435 + +1.3 5,733,435 + -1.8 5,733,435 + -2.1 5,733,435 + -0.5 5,733,436 - -1.8 5,733,436 - +1.0 5,733,436 - +1.0 5,733,511 + AO353_26025 0.15 +0.0 5,733,511 + AO353_26025 0.15 +0.6 5,733,511 + AO353_26025 0.15 +0.8 5,733,511 + AO353_26025 0.15 -2.4 5,733,511 + AO353_26025 0.15 -1.5 5,733,511 + AO353_26025 0.15 -0.8 5,733,511 + AO353_26025 0.15 -0.5 5,733,512 - AO353_26025 0.15 +0.6 5,733,512 - AO353_26025 0.15 -0.5 5,733,512 - AO353_26025 0.15 +0.3 5,733,512 - AO353_26025 0.15 +2.0 5,733,512 - AO353_26025 0.15 +0.2 5,733,512 - AO353_26025 0.15 +1.5 5,733,512 - AO353_26025 0.15 -0.5 5,733,512 - AO353_26025 0.15 +0.0 5,733,512 - AO353_26025 0.15 -0.4 5,733,512 - AO353_26025 0.15 -2.3 5,733,512 - AO353_26025 0.15 -0.5 5,733,512 - AO353_26025 0.15 +0.8 5,733,641 - AO353_26025 0.75 +0.3 5,733,667 + AO353_26025 0.87 +1.6 5,733,667 + AO353_26025 0.87 -0.3 5,733,667 + AO353_26025 0.87 -0.3 5,733,668 - AO353_26025 0.88 -0.5 5,733,728 - -0.3 5,733,728 - +2.0 5,733,728 - -1.5 5,733,728 - +0.8 5,733,728 - +0.8 5,733,729 + -1.5 5,733,730 - -0.5 5,733,841 + -0.3 5,733,841 + -1.1 5,733,841 + -0.4 5,733,841 + -0.4 5,733,841 + -0.1 5,733,842 - +0.3 5,733,842 - -1.3 5,733,842 - +0.8 5,733,842 - +1.3 5,733,842 - +1.0 5,733,842 - -0.2 5,733,842 - +0.5 5,733,842 - -0.3 5,733,851 + +0.5 5,733,851 + +0.5 5,733,851 + -0.5 5,733,852 - +0.6 5,733,852 - +0.6 5,733,852 - +0.8 5,733,854 + +0.0 5,733,855 - -1.0 5,733,855 - +0.9 5,733,855 - +0.7 5,733,883 + +1.6 5,733,883 + +1.0 5,733,883 + -1.5 5,733,884 - -1.3 5,733,884 - -1.3 5,733,886 + -0.3 5,733,886 + -0.2 5,733,886 + -0.3 5,733,886 + -0.4 5,733,887 - -2.5 5,733,887 - +3.9 5,733,890 + +1.6 5,733,890 + +0.2 5,733,890 + -0.5 5,733,891 - -0.4 5,733,891 - -1.4 5,733,891 - -1.3 5,733,990 + AO353_26030 0.23 +0.4 5,733,991 - +1.0 5,734,035 + AO353_26030 0.30 -0.4 5,734,036 - AO353_26030 0.30 +1.2 5,734,050 + AO353_26030 0.33 +0.2 5,734,050 + AO353_26030 0.33 -0.4 5,734,051 - AO353_26030 0.33 +0.7 5,734,051 - AO353_26030 0.33 -0.5 5,734,051 - AO353_26030 0.33 -2.5 5,734,051 - AO353_26030 0.33 +0.3 5,734,051 - AO353_26030 0.33 +0.7 5,734,051 - AO353_26030 0.33 +0.6 5,734,094 + AO353_26030 0.40 -0.8 5,734,094 + AO353_26030 0.40 -0.7 5,734,094 + AO353_26030 0.40 +1.0 5,734,095 - AO353_26030 0.40 +0.2 5,734,095 - AO353_26030 0.40 +1.0 5,734,095 - AO353_26030 0.40 +2.0 5,734,095 - AO353_26030 0.40 +0.6 5,734,184 + AO353_26030 0.54 +0.1 5,734,195 + AO353_26030 0.56 -1.2 5,734,195 + AO353_26030 0.56 +0.2 5,734,195 + AO353_26030 0.56 +1.4 5,734,195 + AO353_26030 0.56 -2.3 5,734,196 - AO353_26030 0.56 +0.1 5,734,298 + AO353_26030 0.72 -1.4 5,734,298 + AO353_26030 0.72 -2.8 5,734,298 + AO353_26030 0.72 +0.0 5,734,298 + AO353_26030 0.72 -1.7 5,734,298 + AO353_26030 0.72 +1.3 5,734,299 - AO353_26030 0.73 +0.8 5,734,299 - AO353_26030 0.73 +0.5 5,734,299 - AO353_26030 0.73 +0.6 5,734,299 - AO353_26030 0.73 +0.3 5,734,299 - AO353_26030 0.73 -0.2 5,734,299 - AO353_26030 0.73 -2.5 5,734,388 + AO353_26030 0.87 +0.2 5,734,456 + -0.9 5,734,485 - -0.4 5,734,512 - -0.3 5,734,512 - -0.8 5,734,515 + -0.7 5,734,554 + +1.8 5,734,578 + +0.2 5,734,578 + -0.5 5,734,578 + -0.9 5,734,579 - -1.0 5,734,620 + -0.4 5,734,621 - +0.2 5,734,726 - AO353_26035 0.25 -0.6 5,734,742 - AO353_26035 0.28 +1.3 5,734,784 - AO353_26035 0.34 -2.0 5,734,784 - AO353_26035 0.34 +1.6 5,734,815 + AO353_26035 0.39 +0.1 5,734,845 + AO353_26035 0.44 +0.4 5,734,845 + AO353_26035 0.44 +1.9 5,734,845 + AO353_26035 0.44 +0.4 5,734,845 + AO353_26035 0.44 -1.1 5,734,845 + AO353_26035 0.44 +0.2 5,734,845 + AO353_26035 0.44 +1.5 5,734,846 - AO353_26035 0.44 +0.2 5,734,846 - AO353_26035 0.44 +0.0 5,734,846 - AO353_26035 0.44 +2.0 5,734,850 + AO353_26035 0.45 +0.6 5,734,850 + AO353_26035 0.45 +1.3 5,734,882 + AO353_26035 0.50 -0.7 5,734,882 + AO353_26035 0.50 +0.3 5,734,882 + AO353_26035 0.50 -1.4 5,734,883 - AO353_26035 0.50 +0.0 5,734,883 - AO353_26035 0.50 +0.0 5,734,916 + AO353_26035 0.55 +1.0 5,734,916 + AO353_26035 0.55 +0.7 5,734,916 + AO353_26035 0.55 +1.0 5,734,916 + AO353_26035 0.55 +1.2 5,734,995 + AO353_26035 0.67 -0.2 5,734,995 + AO353_26035 0.67 -0.9 5,734,995 + AO353_26035 0.67 +0.5 5,734,996 - AO353_26035 0.67 +1.6 5,734,996 - AO353_26035 0.67 -1.4 5,734,996 - AO353_26035 0.67 -0.2 5,734,996 - AO353_26035 0.67 -0.4 5,735,037 + AO353_26035 0.73 -0.5 5,735,037 + AO353_26035 0.73 -0.8 5,735,037 + AO353_26035 0.73 -0.2 5,735,037 + AO353_26035 0.73 +0.3 5,735,037 + AO353_26035 0.73 +0.7 5,735,037 + AO353_26035 0.73 +0.5 5,735,038 - AO353_26035 0.74 +0.2 5,735,258 + -0.4 5,735,292 + +0.0 5,735,292 + -2.8 5,735,292 + -0.8 5,735,293 - +0.0 5,735,293 - -1.4 5,735,293 - -0.3 5,735,293 - +0.5 5,735,293 - -0.5 5,735,293 - -1.1 5,735,367 + -1.8 5,735,367 + -1.8 5,735,368 - -0.4 5,735,368 - +0.2 5,735,429 + -0.5 5,735,429 + -1.9 5,735,430 - -0.5
Or see this region's nucleotide sequence