Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21660

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_21655 and AO353_21660 are separated by 3 nucleotidesAO353_21660 and AO353_21665 are separated by 196 nucleotides AO353_21655: AO353_21655 - cobalamin biosynthesis protein CobW, at 4,746,373 to 4,747,440 _21655 AO353_21660: AO353_21660 - cobalamin biosynthesis protein CobN, at 4,747,444 to 4,751,217 _21660 AO353_21665: AO353_21665 - magnesium chelatase, at 4,751,414 to 4,752,421 _21665 Position (kb) 4747 4748 4749 4750 4751 4752Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4746.580 kb on + strand, within AO353_21655at 4746.580 kb on + strand, within AO353_21655at 4746.580 kb on + strand, within AO353_21655at 4746.580 kb on + strand, within AO353_21655at 4746.581 kb on - strand, within AO353_21655at 4746.581 kb on - strand, within AO353_21655at 4746.581 kb on - strand, within AO353_21655at 4747.595 kb on - strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.654 kb on + strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.655 kb on - strandat 4747.717 kb on + strandat 4747.824 kb on + strand, within AO353_21660at 4747.824 kb on + strand, within AO353_21660at 4747.824 kb on + strand, within AO353_21660at 4747.824 kb on + strand, within AO353_21660at 4747.900 kb on + strand, within AO353_21660at 4747.901 kb on - strand, within AO353_21660at 4747.978 kb on + strand, within AO353_21660at 4747.978 kb on + strand, within AO353_21660at 4747.979 kb on - strand, within AO353_21660at 4747.979 kb on - strand, within AO353_21660at 4748.664 kb on + strand, within AO353_21660at 4748.665 kb on - strand, within AO353_21660at 4748.818 kb on + strand, within AO353_21660at 4748.818 kb on + strand, within AO353_21660at 4748.818 kb on + strand, within AO353_21660at 4748.819 kb on - strand, within AO353_21660at 4748.819 kb on - strand, within AO353_21660at 4748.819 kb on - strand, within AO353_21660at 4748.819 kb on - strand, within AO353_21660at 4748.822 kb on - strand, within AO353_21660at 4748.822 kb on - strand, within AO353_21660at 4749.001 kb on + strand, within AO353_21660at 4749.001 kb on + strand, within AO353_21660at 4749.046 kb on + strand, within AO353_21660at 4749.046 kb on + strand, within AO353_21660at 4749.046 kb on + strand, within AO353_21660at 4749.047 kb on - strand, within AO353_21660at 4749.047 kb on - strand, within AO353_21660at 4749.047 kb on - strand, within AO353_21660at 4749.068 kb on - strand, within AO353_21660at 4749.186 kb on + strand, within AO353_21660at 4749.186 kb on + strand, within AO353_21660at 4749.186 kb on + strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.187 kb on - strand, within AO353_21660at 4749.190 kb on + strand, within AO353_21660at 4749.191 kb on - strand, within AO353_21660at 4749.191 kb on - strand, within AO353_21660at 4749.295 kb on + strandat 4749.296 kb on - strand, within AO353_21660at 4749.334 kb on + strand, within AO353_21660at 4749.334 kb on + strand, within AO353_21660at 4749.337 kb on + strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.338 kb on - strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.493 kb on + strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4749.494 kb on - strand, within AO353_21660at 4750.277 kb on + strand, within AO353_21660at 4750.278 kb on - strand, within AO353_21660at 4750.419 kb on + strand, within AO353_21660at 4750.540 kb on + strand, within AO353_21660at 4750.609 kb on + strand, within AO353_21660at 4750.609 kb on + strand, within AO353_21660at 4750.609 kb on + strand, within AO353_21660at 4750.610 kb on - strand, within AO353_21660at 4750.610 kb on - strand, within AO353_21660at 4750.753 kb on + strand, within AO353_21660at 4750.753 kb on + strand, within AO353_21660at 4750.753 kb on + strand, within AO353_21660at 4750.753 kb on + strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.754 kb on - strand, within AO353_21660at 4750.756 kb on + strand, within AO353_21660at 4750.756 kb on + strand, within AO353_21660at 4750.756 kb on + strand, within AO353_21660at 4750.819 kb on + strand, within AO353_21660at 4750.819 kb on + strand, within AO353_21660at 4750.977 kb on + strandat 4750.977 kb on + strandat 4750.977 kb on + strandat 4751.027 kb on - strandat 4751.048 kb on - strandat 4751.048 kb on - strandat 4751.088 kb on + strandat 4751.088 kb on + strandat 4751.088 kb on + strandat 4751.089 kb on - strandat 4751.089 kb on - strandat 4751.199 kb on + strandat 4751.200 kb on - strandat 4751.200 kb on - strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.201 kb on + strandat 4751.202 kb on - strandat 4751.202 kb on - strandat 4751.202 kb on - strandat 4751.202 kb on - strandat 4751.202 kb on - strandat 4751.389 kb on + strandat 4751.389 kb on + strandat 4751.389 kb on + strandat 4751.390 kb on - strandat 4751.390 kb on - strandat 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strand, within AO353_21665at 4751.720 kb on + strandat 4751.721 kb on - strand, within AO353_21665at 4751.721 kb on - strand, within AO353_21665at 4751.721 kb on - strand, within AO353_21665at 4751.721 kb on - strand, within AO353_21665at 4751.721 kb on - strand, within AO353_21665at 4751.766 kb on + strand, within AO353_21665

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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4,746,580 + AO353_21655 0.19 -2.1
4,746,580 + AO353_21655 0.19 -1.6
4,746,580 + AO353_21655 0.19 -0.8
4,746,580 + AO353_21655 0.19 -2.8
4,746,581 - AO353_21655 0.19 -2.8
4,746,581 - AO353_21655 0.19 -0.9
4,746,581 - AO353_21655 0.19 +0.9
4,747,595 - +0.1
4,747,654 + +0.1
4,747,654 + -0.5
4,747,654 + -0.6
4,747,654 + -0.3
4,747,654 + -0.9
4,747,654 + +0.1
4,747,654 + -1.0
4,747,654 + -0.8
4,747,654 + -2.2
4,747,655 - -0.6
4,747,655 - -1.9
4,747,655 - -1.2
4,747,655 - -1.5
4,747,655 - -1.5
4,747,655 - -0.5
4,747,655 - -0.5
4,747,655 - -1.1
4,747,655 - -0.2
4,747,655 - +0.4
4,747,655 - -1.9
4,747,717 + -1.2
4,747,824 + AO353_21660 0.10 -0.8
4,747,824 + AO353_21660 0.10 -2.0
4,747,824 + AO353_21660 0.10 +0.5
4,747,824 + AO353_21660 0.10 -1.7
4,747,900 + AO353_21660 0.12 -1.6
4,747,901 - AO353_21660 0.12 +1.0
4,747,978 + AO353_21660 0.14 -0.6
4,747,978 + AO353_21660 0.14 -1.6
4,747,979 - AO353_21660 0.14 +1.2
4,747,979 - AO353_21660 0.14 +1.5
4,748,664 + AO353_21660 0.32 +0.1
4,748,665 - AO353_21660 0.32 -0.9
4,748,818 + AO353_21660 0.36 -1.2
4,748,818 + AO353_21660 0.36 -0.1
4,748,818 + AO353_21660 0.36 -1.6
4,748,819 - AO353_21660 0.36 -1.3
4,748,819 - AO353_21660 0.36 -0.5
4,748,819 - AO353_21660 0.36 -2.8
4,748,819 - AO353_21660 0.36 +0.9
4,748,822 - AO353_21660 0.37 +0.2
4,748,822 - AO353_21660 0.37 -0.8
4,749,001 + AO353_21660 0.41 -0.5
4,749,001 + AO353_21660 0.41 -1.3
4,749,046 + AO353_21660 0.42 -0.3
4,749,046 + AO353_21660 0.42 -1.9
4,749,046 + AO353_21660 0.42 -0.9
4,749,047 - AO353_21660 0.42 -1.4
4,749,047 - AO353_21660 0.42 -0.2
4,749,047 - AO353_21660 0.42 -2.1
4,749,068 - AO353_21660 0.43 +0.5
4,749,186 + AO353_21660 0.46 -1.8
4,749,186 + AO353_21660 0.46 -1.1
4,749,186 + AO353_21660 0.46 -0.3
4,749,187 - AO353_21660 0.46 +0.8
4,749,187 - AO353_21660 0.46 +0.2
4,749,187 - AO353_21660 0.46 -0.3
4,749,187 - AO353_21660 0.46 -1.6
4,749,187 - AO353_21660 0.46 -1.0
4,749,187 - AO353_21660 0.46 -1.8
4,749,187 - AO353_21660 0.46 -1.2
4,749,187 - AO353_21660 0.46 -1.5
4,749,187 - AO353_21660 0.46 -2.2
4,749,187 - AO353_21660 0.46 -0.6
4,749,187 - AO353_21660 0.46 -1.3
4,749,190 + AO353_21660 0.46 -0.7
4,749,191 - AO353_21660 0.46 -2.7
4,749,191 - AO353_21660 0.46 -0.1
4,749,295 + +0.2
4,749,296 - AO353_21660 0.49 -0.5
4,749,334 + AO353_21660 0.50 -2.1
4,749,334 + AO353_21660 0.50 -1.3
4,749,337 + AO353_21660 0.50 -1.3
4,749,338 - AO353_21660 0.50 -1.0
4,749,338 - AO353_21660 0.50 +1.1
4,749,338 - AO353_21660 0.50 -0.6
4,749,338 - AO353_21660 0.50 +0.1
4,749,338 - AO353_21660 0.50 -0.8
4,749,338 - AO353_21660 0.50 -0.6
4,749,493 + AO353_21660 0.54 +0.5
4,749,493 + AO353_21660 0.54 +0.1
4,749,493 + AO353_21660 0.54 +0.4
4,749,493 + AO353_21660 0.54 -3.0
4,749,493 + AO353_21660 0.54 -0.9
4,749,493 + AO353_21660 0.54 -0.5
4,749,494 - AO353_21660 0.54 -2.0
4,749,494 - AO353_21660 0.54 +0.9
4,749,494 - AO353_21660 0.54 +0.4
4,749,494 - AO353_21660 0.54 -1.6
4,749,494 - AO353_21660 0.54 +0.1
4,749,494 - AO353_21660 0.54 -1.3
4,750,277 + AO353_21660 0.75 +1.5
4,750,278 - AO353_21660 0.75 -0.9
4,750,419 + AO353_21660 0.79 -1.1
4,750,540 + AO353_21660 0.82 -0.3
4,750,609 + AO353_21660 0.84 -2.5
4,750,609 + AO353_21660 0.84 +1.0
4,750,609 + AO353_21660 0.84 -1.1
4,750,610 - AO353_21660 0.84 -1.2
4,750,610 - AO353_21660 0.84 -2.1
4,750,753 + AO353_21660 0.88 -1.1
4,750,753 + AO353_21660 0.88 +0.7
4,750,753 + AO353_21660 0.88 -1.9
4,750,753 + AO353_21660 0.88 -1.2
4,750,754 - AO353_21660 0.88 -1.3
4,750,754 - AO353_21660 0.88 -0.5
4,750,754 - AO353_21660 0.88 +0.5
4,750,754 - AO353_21660 0.88 +0.8
4,750,754 - AO353_21660 0.88 +0.0
4,750,754 - AO353_21660 0.88 +0.9
4,750,756 + AO353_21660 0.88 -0.9
4,750,756 + AO353_21660 0.88 -1.3
4,750,756 + AO353_21660 0.88 -1.3
4,750,819 + AO353_21660 0.89 -1.3
4,750,819 + AO353_21660 0.89 -2.7
4,750,977 + -0.4
4,750,977 + +0.7
4,750,977 + -0.6
4,751,027 - -2.2
4,751,048 - -0.9
4,751,048 - +0.7
4,751,088 + -0.8
4,751,088 + -0.5
4,751,088 + -0.2
4,751,089 - -1.7
4,751,089 - +0.5
4,751,199 + -0.3
4,751,200 - -1.3
4,751,200 - +0.0
4,751,201 + -0.9
4,751,201 + -1.2
4,751,201 + -1.0
4,751,201 + -2.5
4,751,201 + -1.1
4,751,201 + -0.8
4,751,201 + -1.0
4,751,201 + -2.3
4,751,201 + +0.2
4,751,201 + -1.6
4,751,202 - -1.3
4,751,202 - -1.8
4,751,202 - -0.1
4,751,202 - +2.6
4,751,202 - -0.0
4,751,389 + -0.0
4,751,389 + -0.7
4,751,389 + +1.0
4,751,390 - +0.4
4,751,390 - -3.2
4,751,720 + AO353_21665 0.30 +1.2
4,751,720 + AO353_21665 0.30 -0.2
4,751,720 + AO353_21665 0.30 +1.8
4,751,720 + AO353_21665 0.30 -0.1
4,751,720 + AO353_21665 0.30 +0.1
4,751,720 + AO353_21665 0.30 -2.0
4,751,720 + AO353_21665 0.30 +0.2
4,751,720 + AO353_21665 0.30 -1.5
4,751,720 + AO353_21665 0.30 -1.0
4,751,720 + AO353_21665 0.30 -0.6
4,751,720 + AO353_21665 0.30 -0.3
4,751,720 + -1.1
4,751,721 - AO353_21665 0.30 -1.3
4,751,721 - AO353_21665 0.30 -0.1
4,751,721 - AO353_21665 0.30 -2.7
4,751,721 - AO353_21665 0.30 -1.0
4,751,721 - AO353_21665 0.30 +0.9
4,751,766 + AO353_21665 0.35 -1.3

Or see this region's nucleotide sequence