Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11445 and AO353_11450 are separated by 287 nucleotides AO353_11450 and AO353_11455 are separated by 208 nucleotides AO353_11455 and AO353_11460 are separated by 222 nucleotides
AO353_11445: AO353_11445 - hypothetical protein, at 2,530,385 to 2,531,983
_11445
AO353_11450: AO353_11450 - hypothetical protein, at 2,532,271 to 2,532,498
_11450
AO353_11455: AO353_11455 - hypothetical protein, at 2,532,707 to 2,532,970
_11455
AO353_11460: AO353_11460 - hypothetical protein, at 2,533,193 to 2,534,050
_11460
Position (kb)
2532
2533 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2531.751 kb on + strand, within AO353_11445 at 2531.772 kb on + strand, within AO353_11445 at 2531.773 kb on - strand, within AO353_11445 at 2531.859 kb on + strand at 2531.860 kb on - strand at 2531.872 kb on + strand at 2531.872 kb on + strand at 2531.873 kb on - strand at 2531.988 kb on - strand at 2531.991 kb on + strand at 2531.991 kb on + strand at 2531.992 kb on - strand at 2531.995 kb on + strand at 2532.015 kb on - strand at 2532.060 kb on + strand at 2532.111 kb on - strand at 2532.180 kb on - strand at 2532.257 kb on + strand at 2532.291 kb on + strand at 2532.334 kb on - strand, within AO353_11450 at 2532.365 kb on + strand, within AO353_11450 at 2532.366 kb on - strand, within AO353_11450 at 2532.366 kb on - strand, within AO353_11450 at 2532.400 kb on + strand, within AO353_11450 at 2532.401 kb on - strand, within AO353_11450 at 2532.401 kb on - strand, within AO353_11450 at 2532.401 kb on - strand, within AO353_11450 at 2532.409 kb on - strand, within AO353_11450 at 2532.410 kb on + strand, within AO353_11450 at 2532.411 kb on - strand, within AO353_11450 at 2532.411 kb on - strand, within AO353_11450 at 2532.411 kb on - strand, within AO353_11450 at 2532.411 kb on - strand, within AO353_11450 at 2532.412 kb on + strand, within AO353_11450 at 2532.413 kb on - strand, within AO353_11450 at 2532.413 kb on - strand, within AO353_11450 at 2532.434 kb on + strand, within AO353_11450 at 2532.463 kb on - strand, within AO353_11450 at 2532.481 kb on - strand at 2532.499 kb on + strand at 2532.499 kb on + strand at 2532.499 kb on + strand at 2532.500 kb on - strand at 2532.500 kb on - strand at 2532.556 kb on - strand at 2532.593 kb on + strand at 2532.598 kb on - strand at 2532.598 kb on - strand at 2532.645 kb on + strand at 2532.862 kb on + strand, within AO353_11455 at 2532.862 kb on + strand, within AO353_11455 at 2532.863 kb on - strand, within AO353_11455 at 2532.924 kb on + strand, within AO353_11455 at 2532.930 kb on + strand, within AO353_11455 at 2533.008 kb on + strand at 2533.009 kb on - strand at 2533.029 kb on + strand at 2533.030 kb on - strand at 2533.030 kb on - strand at 2533.050 kb on - strand at 2533.050 kb on - strand at 2533.065 kb on - strand at 2533.089 kb on + strand at 2533.120 kb on + strand at 2533.144 kb on + strand at 2533.206 kb on - strand at 2533.206 kb on - strand at 2533.286 kb on + strand, within AO353_11460 at 2533.286 kb on + strand, within AO353_11460 at 2533.286 kb on + strand, within AO353_11460 at 2533.286 kb on + strand, within AO353_11460 at 2533.286 kb on + strand, within AO353_11460 at 2533.286 kb on + strand, within AO353_11460 at 2533.287 kb on - strand, within AO353_11460 at 2533.287 kb on - strand, within AO353_11460 at 2533.287 kb on - strand, within AO353_11460 at 2533.287 kb on - strand, within AO353_11460 at 2533.301 kb on + strand, within AO353_11460 at 2533.301 kb on + strand, within AO353_11460 at 2533.329 kb on + strand, within AO353_11460 at 2533.329 kb on + strand, within AO353_11460 at 2533.330 kb on - strand, within AO353_11460 at 2533.343 kb on + strand, within AO353_11460 at 2533.344 kb on - strand, within AO353_11460 at 2533.344 kb on - strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.381 kb on + strand, within AO353_11460 at 2533.382 kb on - strand, within AO353_11460 at 2533.382 kb on - strand, within AO353_11460 at 2533.382 kb on - strand, within AO353_11460 at 2533.382 kb on - strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.397 kb on + strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.398 kb on - strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.409 kb on + strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.410 kb on - strand, within AO353_11460 at 2533.497 kb on - strand, within AO353_11460 at 2533.627 kb on - strand, within AO353_11460 at 2533.643 kb on + strand, within AO353_11460 at 2533.644 kb on - strand, within AO353_11460 at 2533.644 kb on - strand, within AO353_11460 at 2533.644 kb on - strand, within AO353_11460 at 2533.814 kb on + strand, within AO353_11460 at 2533.815 kb on - strand, within AO353_11460 at 2533.815 kb on - strand, within AO353_11460 at 2533.815 kb on - strand, within AO353_11460 at 2533.815 kb on - strand, within AO353_11460 at 2533.858 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.922 kb on + strand, within AO353_11460 at 2533.923 kb on - strand, within AO353_11460 at 2533.923 kb on - strand, within AO353_11460 at 2533.923 kb on - strand, within AO353_11460 at 2533.923 kb on - strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.925 kb on + strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.926 kb on - strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.927 kb on + strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.928 kb on - strand, within AO353_11460 at 2533.944 kb on + strand, within AO353_11460 at 2533.944 kb on + strand, within AO353_11460 at 2533.945 kb on - strand, within AO353_11460 at 2533.945 kb on - strand, within AO353_11460 at 2533.945 kb on - strand, within AO353_11460 at 2533.945 kb on - strand, within AO353_11460
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,531,751 + AO353_11445 0.85 +0.3 2,531,772 + AO353_11445 0.87 +0.1 2,531,773 - AO353_11445 0.87 -2.5 2,531,859 + -0.1 2,531,860 - -0.6 2,531,872 + +0.2 2,531,872 + -1.1 2,531,873 - -1.3 2,531,988 - +0.7 2,531,991 + -0.4 2,531,991 + +1.3 2,531,992 - -3.0 2,531,995 + +0.1 2,532,015 - -0.4 2,532,060 + +0.6 2,532,111 - -0.4 2,532,180 - +0.9 2,532,257 + +0.3 2,532,291 + -0.7 2,532,334 - AO353_11450 0.28 +0.2 2,532,365 + AO353_11450 0.41 +0.0 2,532,366 - AO353_11450 0.42 +0.6 2,532,366 - AO353_11450 0.42 -0.1 2,532,400 + AO353_11450 0.57 -0.9 2,532,401 - AO353_11450 0.57 -1.5 2,532,401 - AO353_11450 0.57 +1.1 2,532,401 - AO353_11450 0.57 -0.7 2,532,409 - AO353_11450 0.61 +0.2 2,532,410 + AO353_11450 0.61 +1.1 2,532,411 - AO353_11450 0.61 -0.1 2,532,411 - AO353_11450 0.61 +1.5 2,532,411 - AO353_11450 0.61 +0.5 2,532,411 - AO353_11450 0.61 -0.0 2,532,412 + AO353_11450 0.62 -0.7 2,532,413 - AO353_11450 0.62 -1.1 2,532,413 - AO353_11450 0.62 +0.5 2,532,434 + AO353_11450 0.71 +1.4 2,532,463 - AO353_11450 0.84 +1.6 2,532,481 - -0.3 2,532,499 + -0.5 2,532,499 + -1.3 2,532,499 + +0.7 2,532,500 - +0.5 2,532,500 - +1.2 2,532,556 - +0.8 2,532,593 + +1.1 2,532,598 - +1.5 2,532,598 - +0.7 2,532,645 + -0.2 2,532,862 + AO353_11455 0.59 -0.5 2,532,862 + AO353_11455 0.59 -0.8 2,532,863 - AO353_11455 0.59 -1.6 2,532,924 + AO353_11455 0.82 -0.5 2,532,930 + AO353_11455 0.84 -0.5 2,533,008 + -2.3 2,533,009 - +0.5 2,533,029 + -1.1 2,533,030 - +0.3 2,533,030 - +0.4 2,533,050 - +0.4 2,533,050 - -0.5 2,533,065 - +1.1 2,533,089 + +0.3 2,533,120 + +0.2 2,533,144 + +0.2 2,533,206 - +1.2 2,533,206 - +0.9 2,533,286 + AO353_11460 0.11 -0.1 2,533,286 + AO353_11460 0.11 -0.9 2,533,286 + AO353_11460 0.11 -0.3 2,533,286 + AO353_11460 0.11 -0.4 2,533,286 + AO353_11460 0.11 +0.0 2,533,286 + AO353_11460 0.11 +1.1 2,533,287 - AO353_11460 0.11 -1.8 2,533,287 - AO353_11460 0.11 -0.7 2,533,287 - AO353_11460 0.11 +0.4 2,533,287 - AO353_11460 0.11 -1.4 2,533,301 + AO353_11460 0.13 -1.4 2,533,301 + AO353_11460 0.13 -1.0 2,533,329 + AO353_11460 0.16 -0.2 2,533,329 + AO353_11460 0.16 +1.0 2,533,330 - AO353_11460 0.16 +0.3 2,533,343 + AO353_11460 0.17 -1.2 2,533,344 - AO353_11460 0.18 +0.0 2,533,344 - AO353_11460 0.18 -0.1 2,533,381 + AO353_11460 0.22 +0.7 2,533,381 + AO353_11460 0.22 -0.3 2,533,381 + AO353_11460 0.22 -0.4 2,533,381 + AO353_11460 0.22 +0.4 2,533,381 + AO353_11460 0.22 -1.1 2,533,381 + AO353_11460 0.22 -0.1 2,533,382 - AO353_11460 0.22 +0.9 2,533,382 - AO353_11460 0.22 -0.0 2,533,382 - AO353_11460 0.22 +0.0 2,533,382 - AO353_11460 0.22 -0.3 2,533,397 + AO353_11460 0.24 -0.4 2,533,397 + AO353_11460 0.24 -0.1 2,533,397 + AO353_11460 0.24 +1.2 2,533,397 + AO353_11460 0.24 -1.3 2,533,397 + AO353_11460 0.24 -0.0 2,533,397 + AO353_11460 0.24 +0.1 2,533,397 + AO353_11460 0.24 -0.7 2,533,398 - AO353_11460 0.24 -1.1 2,533,398 - AO353_11460 0.24 +1.1 2,533,398 - AO353_11460 0.24 +0.4 2,533,398 - AO353_11460 0.24 +2.1 2,533,398 - AO353_11460 0.24 +0.5 2,533,398 - AO353_11460 0.24 +0.5 2,533,398 - AO353_11460 0.24 -2.7 2,533,398 - AO353_11460 0.24 +1.2 2,533,398 - AO353_11460 0.24 +0.8 2,533,409 + AO353_11460 0.25 -0.8 2,533,409 + AO353_11460 0.25 -1.4 2,533,409 + AO353_11460 0.25 -0.5 2,533,409 + AO353_11460 0.25 +0.2 2,533,409 + AO353_11460 0.25 -0.8 2,533,409 + AO353_11460 0.25 -0.4 2,533,409 + AO353_11460 0.25 +1.8 2,533,410 - AO353_11460 0.25 +1.7 2,533,410 - AO353_11460 0.25 +1.0 2,533,410 - AO353_11460 0.25 +0.1 2,533,410 - AO353_11460 0.25 +1.1 2,533,410 - AO353_11460 0.25 -0.1 2,533,410 - AO353_11460 0.25 -2.1 2,533,410 - AO353_11460 0.25 -0.1 2,533,410 - AO353_11460 0.25 +0.5 2,533,410 - AO353_11460 0.25 -0.3 2,533,410 - AO353_11460 0.25 +1.1 2,533,497 - AO353_11460 0.35 +0.5 2,533,627 - AO353_11460 0.51 -0.9 2,533,643 + AO353_11460 0.52 -1.1 2,533,644 - AO353_11460 0.53 +1.1 2,533,644 - AO353_11460 0.53 -1.1 2,533,644 - AO353_11460 0.53 -1.6 2,533,814 + AO353_11460 0.72 +0.0 2,533,815 - AO353_11460 0.72 +0.5 2,533,815 - AO353_11460 0.72 -0.5 2,533,815 - AO353_11460 0.72 -1.5 2,533,815 - AO353_11460 0.72 +0.2 2,533,858 + AO353_11460 0.78 +0.4 2,533,922 + AO353_11460 0.85 +1.6 2,533,922 + AO353_11460 0.85 -0.1 2,533,922 + AO353_11460 0.85 +0.7 2,533,922 + AO353_11460 0.85 -0.0 2,533,922 + AO353_11460 0.85 -0.2 2,533,922 + AO353_11460 0.85 +0.6 2,533,922 + AO353_11460 0.85 -1.0 2,533,923 - AO353_11460 0.85 +0.7 2,533,923 - AO353_11460 0.85 +0.1 2,533,923 - AO353_11460 0.85 -0.3 2,533,923 - AO353_11460 0.85 +1.0 2,533,925 + AO353_11460 0.85 +0.1 2,533,925 + AO353_11460 0.85 -0.1 2,533,925 + AO353_11460 0.85 +1.1 2,533,925 + AO353_11460 0.85 -0.0 2,533,925 + AO353_11460 0.85 +0.6 2,533,925 + AO353_11460 0.85 -1.4 2,533,925 + AO353_11460 0.85 -1.1 2,533,925 + AO353_11460 0.85 -1.4 2,533,926 - AO353_11460 0.85 -0.4 2,533,926 - AO353_11460 0.85 +0.5 2,533,926 - AO353_11460 0.85 +0.2 2,533,926 - AO353_11460 0.85 +1.5 2,533,926 - AO353_11460 0.85 +0.4 2,533,926 - AO353_11460 0.85 -0.5 2,533,926 - AO353_11460 0.85 -0.5 2,533,926 - AO353_11460 0.85 +0.2 2,533,926 - AO353_11460 0.85 -1.8 2,533,926 - AO353_11460 0.85 -1.0 2,533,926 - AO353_11460 0.85 +0.4 2,533,927 + AO353_11460 0.86 -1.3 2,533,927 + AO353_11460 0.86 +0.1 2,533,927 + AO353_11460 0.86 -0.2 2,533,927 + AO353_11460 0.86 -1.6 2,533,927 + AO353_11460 0.86 -0.5 2,533,927 + AO353_11460 0.86 -0.2 2,533,927 + AO353_11460 0.86 +0.5 2,533,927 + AO353_11460 0.86 -0.2 2,533,928 - AO353_11460 0.86 -0.3 2,533,928 - AO353_11460 0.86 +0.1 2,533,928 - AO353_11460 0.86 +0.4 2,533,928 - AO353_11460 0.86 -2.2 2,533,928 - AO353_11460 0.86 -1.3 2,533,928 - AO353_11460 0.86 +1.1 2,533,928 - AO353_11460 0.86 -0.9 2,533,928 - AO353_11460 0.86 +0.2 2,533,928 - AO353_11460 0.86 +0.9 2,533,928 - AO353_11460 0.86 -0.2 2,533,928 - AO353_11460 0.86 +1.4 2,533,944 + AO353_11460 0.88 +0.2 2,533,944 + AO353_11460 0.88 -0.9 2,533,945 - AO353_11460 0.88 +0.1 2,533,945 - AO353_11460 0.88 +0.6 2,533,945 - AO353_11460 0.88 +0.3 2,533,945 - AO353_11460 0.88 +0.9
Or see this region's nucleotide sequence