Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10500 and AO353_10505 are separated by 53 nucleotides AO353_10505 and AO353_10510 overlap by 1 nucleotides
AO353_10500: AO353_10500 - acetylornithine aminotransferase, at 2,303,442 to 2,304,614
_10500
AO353_10505: AO353_10505 - hypothetical protein, at 2,304,668 to 2,305,486
_10505
AO353_10510: AO353_10510 - benzoate transporter, at 2,305,486 to 2,306,736
_10510
Position (kb)
2304
2305
2306 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2303.746 kb on - strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.012 kb on + strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.013 kb on - strand, within AO353_10500 at 2304.128 kb on - strand, within AO353_10500 at 2304.128 kb on - strand, within AO353_10500 at 2304.138 kb on + strand, within AO353_10500 at 2304.139 kb on - strand, within AO353_10500 at 2304.174 kb on + strand, within AO353_10500 at 2304.511 kb on + strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.512 kb on - strand at 2304.580 kb on + strand at 2304.580 kb on + strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.581 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.596 kb on - strand at 2304.630 kb on - strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.649 kb on + strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.650 kb on - strand at 2304.670 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.709 kb on - strand at 2304.711 kb on + strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.712 kb on - strand at 2304.881 kb on + strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.882 kb on - strand, within AO353_10505 at 2304.976 kb on - strand, within AO353_10505 at 2304.976 kb on - strand, within AO353_10505 at 2305.012 kb on - strand, within AO353_10505 at 2305.012 kb on - strand, within AO353_10505 at 2305.033 kb on + strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.034 kb on - strand, within AO353_10505 at 2305.260 kb on - strand, within AO353_10505 at 2305.821 kb on - strand, within AO353_10510 at 2305.821 kb on - strand, within AO353_10510 at 2305.821 kb on - strand, within AO353_10510 at 2306.033 kb on + strand, within AO353_10510 at 2306.034 kb on - strand, within AO353_10510 at 2306.241 kb on - strand, within AO353_10510 at 2306.424 kb on - strand, within AO353_10510 at 2306.445 kb on - strand, within AO353_10510
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,303,746 - AO353_10500 0.26 +0.2 2,304,012 + AO353_10500 0.49 -2.1 2,304,012 + AO353_10500 0.49 +2.8 2,304,012 + AO353_10500 0.49 +1.3 2,304,012 + AO353_10500 0.49 -0.2 2,304,012 + AO353_10500 0.49 +1.8 2,304,012 + AO353_10500 0.49 -0.7 2,304,013 - AO353_10500 0.49 +1.1 2,304,013 - AO353_10500 0.49 +0.9 2,304,013 - AO353_10500 0.49 -0.8 2,304,013 - AO353_10500 0.49 +0.3 2,304,128 - AO353_10500 0.58 +1.0 2,304,128 - AO353_10500 0.58 +1.5 2,304,138 + AO353_10500 0.59 -1.3 2,304,139 - AO353_10500 0.59 +1.2 2,304,174 + AO353_10500 0.62 +0.1 2,304,511 + -0.5 2,304,512 - -0.8 2,304,512 - -0.9 2,304,512 - -0.4 2,304,512 - -0.4 2,304,512 - +1.2 2,304,580 + -0.7 2,304,580 + +0.3 2,304,581 - +0.9 2,304,581 - +0.1 2,304,581 - -0.9 2,304,581 - -0.1 2,304,581 - -0.4 2,304,581 - -0.8 2,304,581 - +0.3 2,304,581 - +0.1 2,304,581 - -1.0 2,304,581 - -0.1 2,304,581 - +0.9 2,304,581 - -1.6 2,304,581 - +0.1 2,304,581 - -0.8 2,304,581 - -1.2 2,304,581 - -0.8 2,304,581 - -0.6 2,304,581 - +0.1 2,304,596 - +0.9 2,304,596 - -0.7 2,304,596 - +1.1 2,304,596 - -0.1 2,304,630 - -0.2 2,304,649 + -0.5 2,304,649 + +0.1 2,304,649 + -0.5 2,304,649 + +1.5 2,304,649 + -1.1 2,304,650 - +0.0 2,304,650 - -0.9 2,304,650 - +0.0 2,304,650 - +1.8 2,304,650 - +0.5 2,304,650 - -0.8 2,304,650 - -1.1 2,304,650 - -0.2 2,304,650 - -0.4 2,304,650 - +0.1 2,304,650 - +1.3 2,304,650 - -0.7 2,304,650 - -0.3 2,304,650 - +1.5 2,304,650 - +0.1 2,304,670 - -0.1 2,304,709 - -0.3 2,304,709 - -0.7 2,304,709 - +0.4 2,304,709 - +0.7 2,304,709 - +0.5 2,304,711 + -0.1 2,304,712 - +1.1 2,304,712 - -0.0 2,304,712 - +0.2 2,304,712 - -1.5 2,304,881 + AO353_10505 0.26 +2.5 2,304,882 - AO353_10505 0.26 -1.2 2,304,882 - AO353_10505 0.26 -0.5 2,304,882 - AO353_10505 0.26 -1.3 2,304,976 - AO353_10505 0.38 -0.6 2,304,976 - AO353_10505 0.38 +2.3 2,305,012 - AO353_10505 0.42 -1.7 2,305,012 - AO353_10505 0.42 +0.3 2,305,033 + AO353_10505 0.45 -1.5 2,305,034 - AO353_10505 0.45 -1.9 2,305,034 - AO353_10505 0.45 -0.7 2,305,034 - AO353_10505 0.45 -2.0 2,305,260 - AO353_10505 0.72 -0.7 2,305,821 - AO353_10510 0.27 +0.1 2,305,821 - AO353_10510 0.27 +0.8 2,305,821 - AO353_10510 0.27 +1.5 2,306,033 + AO353_10510 0.44 -0.5 2,306,034 - AO353_10510 0.44 -0.7 2,306,241 - AO353_10510 0.60 +1.1 2,306,424 - AO353_10510 0.75 +0.1 2,306,445 - AO353_10510 0.77 -0.5
Or see this region's nucleotide sequence