Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07895 and AO353_07900 are separated by 73 nucleotides AO353_07900 and AO353_07905 are separated by 425 nucleotides AO353_07905 and AO353_07910 are separated by 111 nucleotides AO353_07910 and AO353_07915 are separated by 328 nucleotides
AO353_07895: AO353_07895 - fructose-bisphosphate aldolase, at 1,743,357 to 1,743,650
_07895
AO353_07900: AO353_07900 - hypothetical protein, at 1,743,724 to 1,743,990
_07900
AO353_07905: AO353_07905 - hypothetical protein, at 1,744,416 to 1,744,955
_07905
AO353_07910: AO353_07910 - hypothetical protein, at 1,745,067 to 1,745,336
_07910
AO353_07915: AO353_07915 - hypothetical protein, at 1,745,665 to 1,746,039
_07915
Position (kb)
1744
1745 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1743.498 kb on + strand, within AO353_07895 at 1743.498 kb on + strand, within AO353_07895 at 1743.498 kb on + strand, within AO353_07895 at 1743.498 kb on + strand, within AO353_07895 at 1743.499 kb on - strand, within AO353_07895 at 1743.499 kb on - strand, within AO353_07895 at 1743.499 kb on - strand, within AO353_07895 at 1743.535 kb on - strand, within AO353_07895 at 1743.656 kb on - strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.661 kb on + strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.662 kb on - strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.663 kb on + strand at 1743.664 kb on - strand at 1743.664 kb on - strand at 1743.664 kb on - strand at 1743.664 kb on - strand at 1743.709 kb on + strand at 1743.709 kb on + strand at 1743.709 kb on + strand at 1743.709 kb on + strand at 1743.733 kb on - strand at 1743.746 kb on - strand at 1743.746 kb on - strand at 1743.807 kb on + strand, within AO353_07900 at 1743.807 kb on + strand, within AO353_07900 at 1743.808 kb on - strand, within AO353_07900 at 1743.908 kb on + strand, within AO353_07900 at 1743.928 kb on - strand, within AO353_07900 at 1743.928 kb on - strand, within AO353_07900 at 1743.937 kb on + strand, within AO353_07900 at 1744.015 kb on + strand at 1744.022 kb on - strand at 1744.055 kb on + strand at 1744.055 kb on + strand at 1744.189 kb on - strand at 1744.198 kb on + strand at 1744.409 kb on - strand at 1744.439 kb on - strand at 1744.527 kb on + strand, within AO353_07905 at 1744.530 kb on - strand, within AO353_07905 at 1744.547 kb on - strand, within AO353_07905 at 1744.695 kb on + strand, within AO353_07905 at 1744.695 kb on + strand, within AO353_07905 at 1744.737 kb on + strand, within AO353_07905 at 1744.738 kb on - strand, within AO353_07905 at 1744.764 kb on - strand, within AO353_07905 at 1744.770 kb on - strand, within AO353_07905 at 1744.821 kb on - strand, within AO353_07905 at 1744.884 kb on + strand, within AO353_07905 at 1744.887 kb on + strand, within AO353_07905 at 1744.907 kb on - strand at 1745.058 kb on + strand at 1745.059 kb on - strand at 1745.066 kb on - strand at 1745.115 kb on - strand, within AO353_07910 at 1745.158 kb on - strand, within AO353_07910 at 1745.179 kb on + strand, within AO353_07910 at 1745.274 kb on - strand, within AO353_07910 at 1745.307 kb on + strand, within AO353_07910 at 1745.390 kb on + strand at 1745.390 kb on + strand at 1745.391 kb on - strand at 1745.480 kb on + strand at 1745.481 kb on - strand at 1745.509 kb on + strand at 1745.509 kb on + strand at 1745.536 kb on + strand at 1745.547 kb on - strand at 1745.623 kb on - strand at 1745.650 kb on - strand at 1745.693 kb on + strand at 1745.699 kb on + strand at 1745.727 kb on - strand, within AO353_07915 at 1745.727 kb on - strand, within AO353_07915 at 1745.734 kb on - strand, within AO353_07915 at 1745.771 kb on + strand, within AO353_07915 at 1745.772 kb on - strand, within AO353_07915 at 1745.848 kb on + strand, within AO353_07915 at 1745.848 kb on + strand, within AO353_07915 at 1745.872 kb on - strand, within AO353_07915 at 1745.883 kb on - strand, within AO353_07915 at 1745.916 kb on - strand, within AO353_07915 at 1745.916 kb on - strand, within AO353_07915 at 1745.916 kb on - strand, within AO353_07915
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,743,498 + AO353_07895 0.48 +0.8 1,743,498 + AO353_07895 0.48 -0.0 1,743,498 + AO353_07895 0.48 -0.0 1,743,498 + AO353_07895 0.48 -2.2 1,743,499 - AO353_07895 0.48 -1.7 1,743,499 - AO353_07895 0.48 -0.0 1,743,499 - AO353_07895 0.48 +0.4 1,743,535 - AO353_07895 0.61 +1.0 1,743,656 - -1.5 1,743,661 + -0.4 1,743,661 + +1.1 1,743,661 + +2.0 1,743,661 + -0.9 1,743,661 + -0.5 1,743,661 + -0.3 1,743,661 + -1.1 1,743,661 + -3.2 1,743,661 + -0.7 1,743,661 + +0.2 1,743,662 - +1.3 1,743,662 - +0.9 1,743,662 - -0.8 1,743,662 - +0.6 1,743,662 - -0.3 1,743,662 - -1.0 1,743,662 - +1.1 1,743,662 - -1.5 1,743,662 - +0.2 1,743,662 - +0.1 1,743,662 - -0.0 1,743,662 - +0.2 1,743,662 - +0.6 1,743,662 - -0.5 1,743,662 - -0.9 1,743,663 + +2.2 1,743,663 + +0.1 1,743,663 + -2.6 1,743,663 + +1.7 1,743,663 + -0.7 1,743,663 + -0.2 1,743,663 + -0.1 1,743,664 - +2.7 1,743,664 - +2.2 1,743,664 - -0.0 1,743,664 - +1.0 1,743,709 + -1.9 1,743,709 + +1.3 1,743,709 + -0.6 1,743,709 + -0.3 1,743,733 - -0.5 1,743,746 - -0.1 1,743,746 - -0.1 1,743,807 + AO353_07900 0.31 +0.5 1,743,807 + AO353_07900 0.31 -0.7 1,743,808 - AO353_07900 0.31 -0.3 1,743,908 + AO353_07900 0.69 -0.1 1,743,928 - AO353_07900 0.76 +0.8 1,743,928 - AO353_07900 0.76 -0.5 1,743,937 + AO353_07900 0.80 -0.8 1,744,015 + -0.5 1,744,022 - -0.6 1,744,055 + +0.5 1,744,055 + -0.4 1,744,189 - +1.1 1,744,198 + -1.9 1,744,409 - +1.1 1,744,439 - -0.2 1,744,527 + AO353_07905 0.21 +0.7 1,744,530 - AO353_07905 0.21 +0.8 1,744,547 - AO353_07905 0.24 +2.4 1,744,695 + AO353_07905 0.52 -0.5 1,744,695 + AO353_07905 0.52 -0.8 1,744,737 + AO353_07905 0.59 +1.1 1,744,738 - AO353_07905 0.60 +0.8 1,744,764 - AO353_07905 0.64 -0.7 1,744,770 - AO353_07905 0.66 +1.4 1,744,821 - AO353_07905 0.75 +0.1 1,744,884 + AO353_07905 0.87 -0.5 1,744,887 + AO353_07905 0.87 -1.5 1,744,907 - -1.4 1,745,058 + +1.0 1,745,059 - -0.5 1,745,066 - +1.4 1,745,115 - AO353_07910 0.18 +0.4 1,745,158 - AO353_07910 0.34 +1.0 1,745,179 + AO353_07910 0.41 +0.4 1,745,274 - AO353_07910 0.77 -0.6 1,745,307 + AO353_07910 0.89 +1.2 1,745,390 + +0.9 1,745,390 + +0.3 1,745,391 - -0.7 1,745,480 + +0.5 1,745,481 - -1.0 1,745,509 + +1.6 1,745,509 + +0.4 1,745,536 + -0.9 1,745,547 - -1.7 1,745,623 - +0.5 1,745,650 - -1.6 1,745,693 + -0.7 1,745,699 + +0.4 1,745,727 - AO353_07915 0.17 -0.6 1,745,727 - AO353_07915 0.17 -1.4 1,745,734 - AO353_07915 0.18 -0.9 1,745,771 + AO353_07915 0.28 +1.0 1,745,772 - AO353_07915 0.29 +1.0 1,745,848 + AO353_07915 0.49 +1.1 1,745,848 + AO353_07915 0.49 -0.0 1,745,872 - AO353_07915 0.55 +0.2 1,745,883 - AO353_07915 0.58 +1.0 1,745,916 - AO353_07915 0.67 -0.6 1,745,916 - AO353_07915 0.67 -0.0 1,745,916 - AO353_07915 0.67 +1.1
Or see this region's nucleotide sequence