Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03650 and AO353_03655 are separated by 2 nucleotides AO353_03655 and AO353_03660 are separated by 144 nucleotides
AO353_03650: AO353_03650 - histidine kinase, at 777,968 to 780,007
_03650
AO353_03655: AO353_03655 - cobalamin adenosyltransferase, at 780,010 to 780,591
_03655
AO353_03660: AO353_03660 - hypothetical protein, at 780,736 to 781,677
_03660
Position (kb) 780
781 Strain fitness (log2 ratio) -2
-1
0
1
2 at 780.006 kb on - strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.035 kb on - strand at 780.035 kb on - strand at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.275 kb on - strand at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.639 kb on + strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.646 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.690 kb on + strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.826 kb on + strand at 780.827 kb on - strand at 780.827 kb on - strand at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.179 kb on - strand, within AO353_03660 at 781.283 kb on + strand, within AO353_03660 at 781.340 kb on + strand, within AO353_03660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 780,006 - +0.2 780,034 + -0.3 780,034 + +0.4 780,034 + -0.2 780,035 - +1.4 780,035 - -0.1 780,274 + AO353_03655 0.45 +2.0 780,274 + AO353_03655 0.45 +0.2 780,274 + AO353_03655 0.45 -0.1 780,274 + AO353_03655 0.45 +0.1 780,274 + AO353_03655 0.45 +1.6 780,274 + AO353_03655 0.45 -0.1 780,275 - -0.4 780,275 - AO353_03655 0.46 +0.9 780,275 - AO353_03655 0.46 -0.7 780,275 - AO353_03655 0.46 -1.3 780,275 - AO353_03655 0.46 +1.6 780,484 + AO353_03655 0.81 -1.5 780,484 + AO353_03655 0.81 +0.5 780,484 + AO353_03655 0.81 -0.2 780,485 - AO353_03655 0.82 +0.5 780,485 - AO353_03655 0.82 +0.1 780,485 - AO353_03655 0.82 -0.9 780,639 + +0.5 780,640 - -2.1 780,640 - +2.2 780,640 - -0.3 780,646 - +1.6 780,666 - +1.1 780,666 - -1.4 780,666 - -0.1 780,666 - +0.6 780,690 + +1.0 780,691 - +1.4 780,691 - -0.4 780,691 - +0.5 780,826 + +1.1 780,827 - -1.2 780,827 - -1.8 781,034 + AO353_03660 0.32 -0.4 781,034 + AO353_03660 0.32 -0.9 781,034 + AO353_03660 0.32 -0.0 781,034 + AO353_03660 0.32 -0.0 781,034 + AO353_03660 0.32 -0.2 781,035 - AO353_03660 0.32 -0.1 781,035 - AO353_03660 0.32 -1.7 781,035 - AO353_03660 0.32 +0.9 781,035 - AO353_03660 0.32 +1.2 781,179 - AO353_03660 0.47 -1.0 781,283 + AO353_03660 0.58 +0.5 781,340 + AO353_03660 0.64 +0.6
Or see this region's nucleotide sequence