Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00395 and AO353_00400 are separated by 278 nucleotides AO353_00400 and AO353_00405 are separated by 119 nucleotides
AO353_00395: AO353_00395 - thiamine biosynthesis protein ApbE, at 72,616 to 73,602
_00395
AO353_00400: AO353_00400 - citrate-proton symporter, at 73,881 to 75,182
_00400
AO353_00405: AO353_00405 - RND transporter, at 75,302 to 76,741
_00405
Position (kb) 73
74
75
76 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 72.890 kb on + strand, within AO353_00395 at 72.890 kb on + strand, within AO353_00395 at 72.890 kb on + strand, within AO353_00395 at 72.891 kb on - strand, within AO353_00395 at 72.891 kb on - strand, within AO353_00395 at 73.153 kb on + strand, within AO353_00395 at 73.153 kb on + strand, within AO353_00395 at 73.153 kb on + strand, within AO353_00395 at 73.153 kb on + strand, within AO353_00395 at 73.153 kb on + strand, within AO353_00395 at 73.154 kb on - strand, within AO353_00395 at 73.154 kb on - strand, within AO353_00395 at 73.154 kb on - strand, within AO353_00395 at 73.154 kb on - strand, within AO353_00395 at 73.154 kb on - strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.182 kb on + strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.183 kb on - strand, within AO353_00395 at 73.184 kb on + strand, within AO353_00395 at 73.295 kb on + strand, within AO353_00395 at 73.296 kb on - strand, within AO353_00395 at 73.296 kb on - strand, within AO353_00395 at 73.374 kb on + strand, within AO353_00395 at 73.374 kb on + strand, within AO353_00395 at 73.374 kb on + strand, within AO353_00395 at 73.374 kb on + strand, within AO353_00395 at 73.374 kb on + strand, within AO353_00395 at 73.375 kb on - strand, within AO353_00395 at 73.375 kb on - strand, within AO353_00395 at 73.375 kb on - strand, within AO353_00395 at 73.375 kb on - strand, within AO353_00395 at 73.375 kb on - strand, within AO353_00395 at 73.511 kb on + strand at 73.511 kb on + strand at 73.511 kb on + strand at 73.511 kb on + strand at 73.511 kb on + strand at 73.511 kb on + strand at 73.511 kb on + strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.512 kb on - strand at 73.523 kb on + strand at 73.523 kb on + strand at 73.523 kb on + strand at 73.524 kb on - strand at 73.524 kb on - strand at 73.685 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.723 kb on - strand at 73.723 kb on - strand at 73.723 kb on - strand at 73.724 kb on + strand at 73.743 kb on + strand at 73.743 kb on + strand at 73.744 kb on - strand at 73.744 kb on - strand at 73.744 kb on - strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.747 kb on + strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.748 kb on - strand at 73.777 kb on - strand at 73.777 kb on - strand at 73.825 kb on - strand at 73.851 kb on + strand at 73.851 kb on + strand at 73.851 kb on + strand at 73.851 kb on + strand at 73.851 kb on + strand at 73.851 kb on + strand at 73.852 kb on - strand at 73.852 kb on - strand at 73.852 kb on - strand at 73.854 kb on + strand at 73.854 kb on + strand at 73.855 kb on - strand at 73.855 kb on - strand at 73.855 kb on - strand at 73.872 kb on + strand at 73.872 kb on + strand at 73.872 kb on + strand at 73.872 kb on + strand at 73.873 kb on - strand at 73.873 kb on - strand at 73.873 kb on - strand at 73.939 kb on + strand at 73.940 kb on - strand at 73.940 kb on - strand at 73.962 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.971 kb on + strand at 73.972 kb on - strand at 73.972 kb on - strand at 73.972 kb on - strand at 73.972 kb on - strand at 73.972 kb on - strand at 74.187 kb on + strand, within AO353_00400 at 74.283 kb on + strand, within AO353_00400 at 74.283 kb on + strand, within AO353_00400 at 74.284 kb on - strand, within AO353_00400 at 74.522 kb on + strand, within AO353_00400 at 74.522 kb on + strand, within AO353_00400 at 74.523 kb on - strand, within AO353_00400 at 74.625 kb on + strand, within AO353_00400 at 74.626 kb on - strand, within AO353_00400 at 74.626 kb on - strand, within AO353_00400 at 74.896 kb on - strand, within AO353_00400 at 74.896 kb on - strand, within AO353_00400 at 74.904 kb on + strand, within AO353_00400 at 74.904 kb on + strand, within AO353_00400 at 74.904 kb on + strand, within AO353_00400 at 74.904 kb on + strand, within AO353_00400 at 74.905 kb on - strand, within AO353_00400 at 74.905 kb on - strand, within AO353_00400 at 75.026 kb on + strand, within AO353_00400 at 75.026 kb on + strand, within AO353_00400 at 75.026 kb on + strand, within AO353_00400 at 75.027 kb on - strand, within AO353_00400 at 75.027 kb on - strand, within AO353_00400 at 75.027 kb on - strand, within AO353_00400 at 75.027 kb on - strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.030 kb on + strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.031 kb on - strand, within AO353_00400 at 75.092 kb on - strand at 75.092 kb on - strand at 75.210 kb on - strand at 75.210 kb on - strand at 75.256 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.354 kb on + strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.355 kb on - strand at 75.450 kb on + strand, within AO353_00405 at 75.450 kb on + strand, within AO353_00405 at 75.451 kb on - strand, within AO353_00405 at 75.505 kb on - strand, within AO353_00405 at 75.541 kb on + strand, within AO353_00405 at 75.609 kb on + strand, within AO353_00405 at 75.609 kb on + strand, within AO353_00405 at 75.609 kb on + strand, within AO353_00405 at 75.795 kb on + strand, within AO353_00405 at 75.796 kb on - strand, within AO353_00405 at 75.796 kb on - strand, within AO353_00405 at 75.829 kb on + strand, within AO353_00405 at 75.830 kb on - strand, within AO353_00405 at 75.830 kb on - strand, within AO353_00405 at 75.830 kb on - strand, within AO353_00405 at 76.017 kb on + strand, within AO353_00405 at 76.017 kb on + strand, within AO353_00405 at 76.017 kb on + strand, within AO353_00405 at 76.018 kb on - strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.098 kb on + strand, within AO353_00405 at 76.099 kb on - strand, within AO353_00405 at 76.099 kb on - strand, within AO353_00405 at 76.099 kb on - strand, within AO353_00405 at 76.140 kb on + strand, within AO353_00405 at 76.140 kb on + strand, within AO353_00405 at 76.140 kb on + strand, within AO353_00405 at 76.140 kb on + strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405 at 76.141 kb on - strand, within AO353_00405
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 72,890 + AO353_00395 0.28 +0.7 72,890 + AO353_00395 0.28 +1.3 72,890 + AO353_00395 0.28 -0.5 72,891 - AO353_00395 0.28 +1.5 72,891 - AO353_00395 0.28 -0.2 73,153 + AO353_00395 0.54 -1.6 73,153 + AO353_00395 0.54 -0.5 73,153 + AO353_00395 0.54 -1.5 73,153 + AO353_00395 0.54 +0.6 73,153 + AO353_00395 0.54 +0.4 73,154 - AO353_00395 0.55 -2.3 73,154 - AO353_00395 0.55 -0.8 73,154 - AO353_00395 0.55 -3.0 73,154 - AO353_00395 0.55 +0.1 73,154 - AO353_00395 0.55 -0.2 73,182 + AO353_00395 0.57 +1.4 73,182 + AO353_00395 0.57 +0.1 73,182 + AO353_00395 0.57 +0.8 73,182 + AO353_00395 0.57 +1.0 73,182 + AO353_00395 0.57 +0.0 73,182 + AO353_00395 0.57 +0.2 73,182 + AO353_00395 0.57 -1.1 73,182 + AO353_00395 0.57 -0.3 73,182 + AO353_00395 0.57 -0.3 73,182 + AO353_00395 0.57 -1.1 73,182 + AO353_00395 0.57 -2.6 73,182 + AO353_00395 0.57 +0.4 73,182 + AO353_00395 0.57 +0.6 73,183 - AO353_00395 0.57 +1.2 73,183 - AO353_00395 0.57 -1.4 73,183 - AO353_00395 0.57 -1.1 73,183 - AO353_00395 0.57 +0.3 73,183 - AO353_00395 0.57 +0.4 73,183 - AO353_00395 0.57 -1.6 73,183 - AO353_00395 0.57 -1.0 73,183 - AO353_00395 0.57 -0.2 73,184 + AO353_00395 0.58 +0.8 73,295 + AO353_00395 0.69 +1.1 73,296 - AO353_00395 0.69 +0.2 73,296 - AO353_00395 0.69 +0.8 73,374 + AO353_00395 0.77 -0.2 73,374 + AO353_00395 0.77 -0.1 73,374 + AO353_00395 0.77 -1.4 73,374 + AO353_00395 0.77 -0.5 73,374 + AO353_00395 0.77 +2.1 73,375 - AO353_00395 0.77 -0.6 73,375 - AO353_00395 0.77 -1.2 73,375 - AO353_00395 0.77 +1.8 73,375 - AO353_00395 0.77 -1.6 73,375 - AO353_00395 0.77 -1.0 73,511 + -0.2 73,511 + -0.2 73,511 + -0.2 73,511 + +0.6 73,511 + -0.1 73,511 + -1.2 73,511 + -0.2 73,512 - +0.8 73,512 - +1.3 73,512 - -0.2 73,512 - -0.7 73,512 - +1.0 73,512 - +0.5 73,512 - +0.4 73,512 - +0.7 73,512 - +0.2 73,512 - +0.5 73,512 - +0.3 73,512 - +0.2 73,523 + +1.2 73,523 + -1.3 73,523 + -0.4 73,524 - +0.1 73,524 - +0.4 73,685 + +0.1 73,722 + -0.6 73,722 + +1.2 73,722 + -0.9 73,722 + +0.4 73,722 + -0.2 73,722 + -0.6 73,723 - -0.2 73,723 - +0.7 73,723 - +1.2 73,724 + +0.8 73,743 + +2.2 73,743 + +0.6 73,744 - -1.7 73,744 - -0.2 73,744 - +0.1 73,747 + +1.2 73,747 + -0.4 73,747 + +1.7 73,747 + +1.0 73,747 + +0.2 73,747 + +1.6 73,747 + -0.4 73,748 - -2.2 73,748 - +0.0 73,748 - +0.1 73,748 - +0.7 73,748 - +0.1 73,748 - -0.4 73,748 - +0.6 73,777 - -0.3 73,777 - -1.8 73,825 - -1.4 73,851 + -0.2 73,851 + -2.4 73,851 + -1.4 73,851 + -0.8 73,851 + -0.2 73,851 + -0.3 73,852 - +0.5 73,852 - -1.6 73,852 - +0.4 73,854 + -0.8 73,854 + -0.6 73,855 - -0.6 73,855 - -1.0 73,855 - -0.2 73,872 + +0.6 73,872 + +1.0 73,872 + +0.2 73,872 + -0.8 73,873 - -1.4 73,873 - +1.2 73,873 - +0.6 73,939 + +0.4 73,940 - -2.3 73,940 - -1.7 73,962 + +0.9 73,971 + +0.5 73,971 + -0.7 73,971 + -0.2 73,971 + +1.4 73,971 + -0.6 73,971 + -0.0 73,972 - +0.4 73,972 - +0.5 73,972 - -0.4 73,972 - +3.2 73,972 - -0.2 74,187 + AO353_00400 0.24 +0.8 74,283 + AO353_00400 0.31 +0.6 74,283 + AO353_00400 0.31 +0.1 74,284 - AO353_00400 0.31 -1.6 74,522 + AO353_00400 0.49 -0.2 74,522 + AO353_00400 0.49 -0.0 74,523 - AO353_00400 0.49 +0.8 74,625 + AO353_00400 0.57 +1.1 74,626 - AO353_00400 0.57 +1.6 74,626 - AO353_00400 0.57 +1.7 74,896 - AO353_00400 0.78 +1.2 74,896 - AO353_00400 0.78 +1.2 74,904 + AO353_00400 0.79 +0.1 74,904 + AO353_00400 0.79 -0.3 74,904 + AO353_00400 0.79 +0.2 74,904 + AO353_00400 0.79 +0.4 74,905 - AO353_00400 0.79 +1.0 74,905 - AO353_00400 0.79 +0.2 75,026 + AO353_00400 0.88 +0.1 75,026 + AO353_00400 0.88 -0.3 75,026 + AO353_00400 0.88 +1.2 75,027 - AO353_00400 0.88 -0.2 75,027 - AO353_00400 0.88 -1.6 75,027 - AO353_00400 0.88 -0.0 75,027 - AO353_00400 0.88 -1.2 75,030 + AO353_00400 0.88 -1.4 75,030 + AO353_00400 0.88 +2.3 75,030 + AO353_00400 0.88 -0.9 75,030 + AO353_00400 0.88 -0.4 75,030 + AO353_00400 0.88 -0.2 75,030 + AO353_00400 0.88 +0.1 75,031 - AO353_00400 0.88 -0.1 75,031 - AO353_00400 0.88 +1.6 75,031 - AO353_00400 0.88 -0.5 75,031 - AO353_00400 0.88 +1.2 75,031 - AO353_00400 0.88 +0.4 75,031 - AO353_00400 0.88 +0.2 75,031 - AO353_00400 0.88 +0.6 75,031 - AO353_00400 0.88 +0.2 75,031 - AO353_00400 0.88 +0.0 75,031 - AO353_00400 0.88 +1.0 75,031 - AO353_00400 0.88 +0.8 75,031 - AO353_00400 0.88 +0.2 75,092 - +0.0 75,092 - +0.0 75,210 - +0.4 75,210 - -0.6 75,256 + -0.3 75,354 + +0.8 75,354 + +0.3 75,354 + +1.6 75,354 + +1.3 75,354 + +0.3 75,354 + +1.2 75,354 + -0.3 75,354 + -0.6 75,355 - -0.4 75,355 - +1.3 75,355 - -0.2 75,355 - +0.1 75,355 - -0.0 75,355 - +0.5 75,355 - -0.3 75,355 - +1.0 75,355 - -0.3 75,355 - -2.5 75,355 - +0.8 75,355 - +0.7 75,355 - +1.2 75,355 - -0.4 75,355 - -1.4 75,450 + AO353_00405 0.10 -1.4 75,450 + AO353_00405 0.10 +0.5 75,451 - AO353_00405 0.10 -0.9 75,505 - AO353_00405 0.14 +0.0 75,541 + AO353_00405 0.17 +0.4 75,609 + AO353_00405 0.21 +0.7 75,609 + AO353_00405 0.21 -0.5 75,609 + AO353_00405 0.21 -1.2 75,795 + AO353_00405 0.34 +0.4 75,796 - AO353_00405 0.34 -0.4 75,796 - AO353_00405 0.34 +0.4 75,829 + AO353_00405 0.37 -1.6 75,830 - AO353_00405 0.37 -1.6 75,830 - AO353_00405 0.37 +0.1 75,830 - AO353_00405 0.37 +0.4 76,017 + AO353_00405 0.50 +0.6 76,017 + AO353_00405 0.50 -0.8 76,017 + AO353_00405 0.50 -0.2 76,018 - AO353_00405 0.50 -0.1 76,098 + AO353_00405 0.55 +0.3 76,098 + AO353_00405 0.55 +1.2 76,098 + AO353_00405 0.55 +1.2 76,098 + AO353_00405 0.55 +0.6 76,098 + AO353_00405 0.55 +0.2 76,098 + AO353_00405 0.55 -1.2 76,099 - AO353_00405 0.55 +0.1 76,099 - AO353_00405 0.55 -1.2 76,099 - AO353_00405 0.55 -0.2 76,140 + AO353_00405 0.58 -0.7 76,140 + AO353_00405 0.58 +1.7 76,140 + AO353_00405 0.58 -1.7 76,140 + AO353_00405 0.58 -0.9 76,141 - AO353_00405 0.58 +0.2 76,141 - AO353_00405 0.58 -0.8 76,141 - AO353_00405 0.58 +0.6 76,141 - AO353_00405 0.58 +0.2 76,141 - AO353_00405 0.58 +1.1 76,141 - AO353_00405 0.58 -1.8 76,141 - AO353_00405 0.58 +0.4 76,141 - AO353_00405 0.58 -0.4 76,141 - AO353_00405 0.58 +0.0 76,141 - AO353_00405 0.58 -0.0
Or see this region's nucleotide sequence