Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30705

Experiment: R2A with Cobalt chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cobalt chloride 0.3 mM
2,264,471	+				-1.1
2,264,471	+				+0.1
2,264,570	-		RR42_RS30700	0.17	+0.1
2,264,602	+		RR42_RS30700	0.21	+0.8
2,264,662	+		RR42_RS30700	0.27	+0.5
2,264,662	+		RR42_RS30700	0.27	-1.6
2,264,663	-		RR42_RS30700	0.27	-1.0
2,264,663	-		RR42_RS30700	0.27	-2.3
2,264,663	-		RR42_RS30700	0.27	+0.2
2,264,663	-		RR42_RS30700	0.27	-1.0
2,264,663	-		RR42_RS30700	0.27	+0.3
2,264,760	-		RR42_RS30700	0.38	-0.5
2,264,771	+		RR42_RS30700	0.39	-0.4
2,264,771	+		RR42_RS30700	0.39	-0.2
2,264,771	+		RR42_RS30700	0.39	+1.2
2,264,771	+		RR42_RS30700	0.39	+0.2
2,264,772	-		RR42_RS30700	0.39	+1.3
2,264,772	-		RR42_RS30700	0.39	-0.7
2,264,772	-		RR42_RS30700	0.39	+0.3
2,264,772	-		RR42_RS30700	0.39	+0.5
2,264,817	-		RR42_RS30700	0.44	-0.3
2,264,985	+		RR42_RS30700	0.62	-0.1
2,265,015	-		RR42_RS30700	0.65	-0.9
2,265,015	-		RR42_RS30700	0.65	-0.2
2,265,127	+		RR42_RS30700	0.77	-0.8
2,265,128	-		RR42_RS30700	0.77	+0.4
2,265,128	-		RR42_RS30700	0.77	+0.4
2,265,199	+		RR42_RS30700	0.84	-0.7
2,265,199	+		RR42_RS30700	0.84	-0.3
2,265,199	+		RR42_RS30700	0.84	-0.4
2,265,199	+		RR42_RS30700	0.84	-0.0
2,265,200	-		RR42_RS30700	0.85	-0.8
2,265,336	+				+0.4
2,265,336	+				+1.0
2,265,336	+				-0.4
2,265,337	-				+0.3
2,265,337	-				+0.4
2,265,337	-				-0.5
2,265,337	-				+0.2
2,265,349	+				-0.3
2,265,349	+				-0.0
2,265,349	+				-2.0
2,265,349	+				-1.8
2,265,349	+				+0.4
2,265,350	-				+0.9
2,265,350	-				-0.4
2,265,350	-				+0.5
2,265,353	+				-0.5
2,265,354	-				+2.0
2,265,354	-				+0.8
2,265,494	-				+2.1
2,265,494	-				+1.8
2,265,494	-				-0.0
2,265,563	-		RR42_RS30705	0.11	+1.8
2,265,650	+		RR42_RS30705	0.17	+0.9
2,265,650	+		RR42_RS30705	0.17	+0.5
2,265,650	+		RR42_RS30705	0.17	+0.1
2,265,651	-		RR42_RS30705	0.17	+2.4
2,265,651	-		RR42_RS30705	0.17	+1.1
2,265,673	+		RR42_RS30705	0.19	-0.6
2,265,673	+		RR42_RS30705	0.19	+0.6
2,265,673	+		RR42_RS30705	0.19	-0.0
2,265,673	+		RR42_RS30705	0.19	-0.7
2,265,673	+		RR42_RS30705	0.19	-0.4
2,265,674	-		RR42_RS30705	0.19	+1.7
2,265,674	-		RR42_RS30705	0.19	+1.4
2,265,674	-		RR42_RS30705	0.19	+1.0
2,265,674	-		RR42_RS30705	0.19	+0.1
2,265,674	-		RR42_RS30705	0.19	+0.1
2,265,718	+		RR42_RS30705	0.22	+0.8
2,265,752	+		RR42_RS30705	0.24	+1.5
2,265,752	+		RR42_RS30705	0.24	+0.8
2,265,752	+		RR42_RS30705	0.24	-1.0
2,265,752	+		RR42_RS30705	0.24	-0.3
2,265,754	+		RR42_RS30705	0.24	+0.4
2,265,754	+		RR42_RS30705	0.24	-0.8
2,265,754	+		RR42_RS30705	0.24	-0.1
2,265,754	+		RR42_RS30705	0.24	-1.9
2,265,754	+		RR42_RS30705	0.24	-2.4
2,265,754	+		RR42_RS30705	0.24	+0.1
2,265,755	-		RR42_RS30705	0.24	+1.6
2,265,755	-		RR42_RS30705	0.24	+1.7
2,265,755	-		RR42_RS30705	0.24	+1.5
2,265,755	-		RR42_RS30705	0.24	+1.9
2,265,755	-		RR42_RS30705	0.24	-0.3
2,265,755	-		RR42_RS30705	0.24	+2.2
2,265,769	+		RR42_RS30705	0.25	-0.3
2,265,769	+		RR42_RS30705	0.25	+0.1
2,265,769	+		RR42_RS30705	0.25	+0.1
2,265,769	+		RR42_RS30705	0.25	-1.0
2,265,769	+		RR42_RS30705	0.25	+0.4
2,265,769	+		RR42_RS30705	0.25	-0.2
2,265,770	-		RR42_RS30705	0.25	+1.2
2,266,018	+		RR42_RS30705	0.42	-2.3
2,266,018	+		RR42_RS30705	0.42	+1.3
2,266,019	-		RR42_RS30705	0.42	+2.4
2,266,019	-		RR42_RS30705	0.42	+1.9
2,266,049	-		RR42_RS30705	0.44	+0.6
2,266,049	-		RR42_RS30705	0.44	+2.2
2,266,126	+		RR42_RS30705	0.50	+0.1
2,266,126	+		RR42_RS30705	0.50	-0.0
2,266,126	+		RR42_RS30705	0.50	+1.9
2,266,132	+		RR42_RS30705	0.50	+1.4
2,266,132	+		RR42_RS30705	0.50	+0.4
2,266,132	+		RR42_RS30705	0.50	+1.0
2,266,132	+		RR42_RS30705	0.50	-0.4
2,266,132	+		RR42_RS30705	0.50	+0.6
2,266,133	-		RR42_RS30705	0.50	+1.6
2,266,133	-		RR42_RS30705	0.50	+1.7
2,266,133	-		RR42_RS30705	0.50	+1.8
2,266,133	-		RR42_RS30705	0.50	+1.2
2,266,133	-		RR42_RS30705	0.50	+1.4
2,266,133	-		RR42_RS30705	0.50	+0.6
2,266,133	-		RR42_RS30705	0.50	+1.8
2,266,133	-		RR42_RS30705	0.50	+1.6
2,266,133	-		RR42_RS30705	0.50	+2.1
2,266,243	+		RR42_RS30705	0.58	+1.0
2,266,243	+		RR42_RS30705	0.58	-0.9
2,266,243	+		RR42_RS30705	0.58	-0.8
2,266,244	-		RR42_RS30705	0.58	+0.4
2,266,244	-		RR42_RS30705	0.58	+1.7
2,266,244	-		RR42_RS30705	0.58	+1.9
2,266,244	-		RR42_RS30705	0.58	+1.3
2,266,244	-		RR42_RS30705	0.58	+0.6
2,266,244	-		RR42_RS30705	0.58	+2.7
2,266,244	-		RR42_RS30705	0.58	+1.6
2,266,244	-		RR42_RS30705	0.58	+1.1
2,266,244	-		RR42_RS30705	0.58	+1.5
2,266,355	-		RR42_RS30705	0.65	-1.2
2,266,430	+		RR42_RS30705	0.71	+0.8
2,266,430	+		RR42_RS30705	0.71	+0.3
2,266,431	-		RR42_RS30705	0.71	+1.8
2,266,432	+		RR42_RS30705	0.71	+0.0
2,266,432	+		RR42_RS30705	0.71	+0.8
2,266,432	+		RR42_RS30705	0.71	+0.6
2,266,433	-		RR42_RS30705	0.71	+1.1
2,266,433	-		RR42_RS30705	0.71	+0.6
2,266,450	+		RR42_RS30705	0.72	-0.2
2,266,450	+		RR42_RS30705	0.72	-1.0
2,266,451	-		RR42_RS30705	0.72	+2.1
2,266,451	-		RR42_RS30705	0.72	+2.3
2,266,454	-		RR42_RS30705	0.72	+3.3
2,266,454	-		RR42_RS30705	0.72	+0.6
2,266,469	-		RR42_RS30705	0.73	+1.2
2,266,485	-		RR42_RS30705	0.74	+0.6
2,266,566	+		RR42_RS30705	0.80	-0.0
2,266,627	+		RR42_RS30705	0.84	-0.4
2,266,627	+		RR42_RS30705	0.84	-1.7
2,266,628	-		RR42_RS30705	0.84	+1.2
2,266,628	-		RR42_RS30705	0.84	+1.4
2,266,699	+		RR42_RS30705	0.89	-3.6
2,266,699	+		RR42_RS30705	0.89	-0.2
2,266,699	+		RR42_RS30705	0.89	+0.5
2,266,699	+		RR42_RS30705	0.89	+0.9
2,266,699	+		RR42_RS30705	0.89	+0.5
2,266,700	-		RR42_RS30705	0.89	+0.8
2,266,700	-		RR42_RS30705	0.89	+1.6
2,266,700	-		RR42_RS30705	0.89	+0.5
2,266,700	-		RR42_RS30705	0.89	-0.5
2,266,700	-		RR42_RS30705	0.89	-0.3
2,266,700	-		RR42_RS30705	0.89	+0.9
2,266,784	-				+0.3
2,266,784	-				+0.4
2,266,784	-				-0.3
2,266,784	-				+0.8
2,266,784	-				+1.3
2,266,816	+				+0.6
2,266,817	-				+0.5
2,266,852	-				-1.2
2,266,966	-				-0.0
2,266,966	-				+0.5
2,267,040	+				-0.2
2,267,040	+				-0.5
2,267,041	-				+0.4
2,267,041	-				+0.6
2,267,054	+				-3.3
2,267,054	+				-0.2
2,267,054	+				-1.4
2,267,055	-				+1.3
2,267,072	+				-0.1
2,267,102	+				-0.3
2,267,103	-				+2.1
2,267,103	-				+1.9
2,267,122	-				+1.9
2,267,135	+				+1.0
2,267,136	-				+2.0
2,267,143	+				+0.7
2,267,143	+				-0.3
2,267,155	+				-3.3
2,267,155	+				-0.7
2,267,156	-				+2.0
2,267,293	+		RR42_RS30710	0.20	+1.3
2,267,293	+		RR42_RS30710	0.20	+1.6
2,267,294	-		RR42_RS30710	0.21	+1.1
2,267,294	-		RR42_RS30710	0.21	+2.3
2,267,310	+		RR42_RS30710	0.23	-0.1
2,267,310	+		RR42_RS30710	0.23	+2.5
2,267,311	-		RR42_RS30710	0.23	+1.8
2,267,311	-		RR42_RS30710	0.23	+1.3
2,267,311	-		RR42_RS30710	0.23	+0.7
2,267,311	-		RR42_RS30710	0.23	+2.1
2,267,313	+		RR42_RS30710	0.24	+1.2
2,267,313	+		RR42_RS30710	0.24	-0.3
2,267,434	-		RR42_RS30710	0.44	+0.9
2,267,478	+		RR42_RS30710	0.51	+0.8
2,267,478	+		RR42_RS30710	0.51	+0.6
2,267,478	+		RR42_RS30710	0.51	+0.2
2,267,479	-		RR42_RS30710	0.51	+1.5
2,267,633	-		RR42_RS30710	0.76	+1.1
2,267,654	-		RR42_RS30710	0.80	+2.5
2,267,661	+		RR42_RS30710	0.81	-0.1
2,267,749	+				-0.0
2,267,750	-				+1.0
2,267,793	-				-1.4
2,267,858	-				+0.6
2,267,858	-				+0.5