Experiment: R2A with Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03315 and RR42_RS03320 are separated by 331 nucleotides RR42_RS03320 and RR42_RS03325 overlap by 4 nucleotides
RR42_RS03315: RR42_RS03315 - RND transporter MFP subunit, at 737,971 to 739,410
_RS03315
RR42_RS03320: RR42_RS03320 - transcriptional regulator, at 739,742 to 740,473
_RS03320
RR42_RS03325: RR42_RS03325 - membrane protein, at 740,470 to 741,747
_RS03325
Position (kb) 739
740
741 Strain fitness (log2 ratio) -2
-1
0
1
2 at 738.877 kb on + strand, within RR42_RS03315 at 739.159 kb on - strand, within RR42_RS03315 at 739.159 kb on - strand, within RR42_RS03315 at 739.275 kb on + strand at 739.286 kb on + strand at 739.286 kb on + strand at 739.286 kb on + strand at 739.286 kb on + strand at 739.287 kb on - strand at 739.287 kb on - strand at 739.467 kb on - strand at 739.481 kb on + strand at 739.481 kb on + strand at 739.482 kb on - strand at 739.482 kb on - strand at 739.482 kb on - strand at 739.482 kb on - strand at 739.489 kb on - strand at 739.601 kb on + strand at 739.601 kb on + strand at 739.602 kb on - strand at 739.612 kb on + strand at 739.612 kb on + strand at 739.612 kb on + strand at 739.613 kb on - strand at 739.613 kb on - strand at 739.668 kb on + strand at 739.686 kb on - strand at 739.726 kb on + strand at 739.727 kb on - strand at 739.730 kb on + strand at 739.730 kb on + strand at 739.730 kb on + strand at 739.730 kb on + strand at 739.731 kb on - strand at 739.731 kb on - strand at 739.741 kb on + strand at 739.742 kb on - strand at 740.051 kb on + strand, within RR42_RS03320 at 740.051 kb on + strand, within RR42_RS03320 at 740.052 kb on - strand, within RR42_RS03320 at 740.313 kb on - strand, within RR42_RS03320 at 740.313 kb on - strand, within RR42_RS03320 at 740.406 kb on - strand at 740.406 kb on - strand at 740.434 kb on + strand at 740.434 kb on + strand at 740.435 kb on - strand at 740.435 kb on - strand at 740.435 kb on - strand at 740.786 kb on + strand, within RR42_RS03325 at 740.927 kb on + strand, within RR42_RS03325 at 740.927 kb on + strand, within RR42_RS03325 at 741.124 kb on - strand, within RR42_RS03325 at 741.452 kb on - strand, within RR42_RS03325 at 741.452 kb on - strand, within RR42_RS03325 at 741.452 kb on - strand, within RR42_RS03325 at 741.457 kb on + strand, within RR42_RS03325 at 741.458 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cobalt chloride 0.3 mM remove 738,877 + RR42_RS03315 0.63 -0.6 739,159 - RR42_RS03315 0.82 -2.2 739,159 - RR42_RS03315 0.82 -0.1 739,275 + +2.4 739,286 + -0.0 739,286 + +1.9 739,286 + +0.0 739,286 + -0.2 739,287 - +0.2 739,287 - -1.7 739,467 - +0.9 739,481 + -0.9 739,481 + -0.7 739,482 - -1.7 739,482 - +2.4 739,482 - +1.0 739,482 - -0.7 739,489 - +0.7 739,601 + -1.1 739,601 + -1.9 739,602 - -2.4 739,612 + -1.0 739,612 + -1.8 739,612 + -2.3 739,613 - -0.9 739,613 - -0.7 739,668 + -0.2 739,686 - +1.4 739,726 + -0.6 739,727 - +0.4 739,730 + -2.4 739,730 + +0.7 739,730 + -0.6 739,730 + +0.1 739,731 - -0.0 739,731 - +0.5 739,741 + +0.7 739,742 - -1.0 740,051 + RR42_RS03320 0.42 +2.5 740,051 + RR42_RS03320 0.42 +0.5 740,052 - RR42_RS03320 0.42 +0.3 740,313 - RR42_RS03320 0.78 +1.1 740,313 - RR42_RS03320 0.78 +0.1 740,406 - +0.6 740,406 - +0.3 740,434 + +0.3 740,434 + +0.9 740,435 - -0.1 740,435 - +0.7 740,435 - +0.3 740,786 + RR42_RS03325 0.25 +0.6 740,927 + RR42_RS03325 0.36 -0.1 740,927 + RR42_RS03325 0.36 -0.2 741,124 - RR42_RS03325 0.51 -0.7 741,452 - RR42_RS03325 0.77 +0.3 741,452 - RR42_RS03325 0.77 +1.1 741,452 - RR42_RS03325 0.77 -1.4 741,457 + RR42_RS03325 0.77 +0.6 741,458 - +0.4
Or see this region's nucleotide sequence