Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08720

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,851,848	+				-1.4
1,851,848	+				+0.5
1,851,849	-				-0.8
1,851,849	-				-1.1
1,851,863	-				+0.3
1,851,925	+				-1.4
1,851,925	+				-1.8
1,851,925	+				-1.6
1,851,926	-				-1.0
1,851,926	-				-0.1
1,851,926	-				+0.1
1,851,926	-				-1.1
1,851,926	-				-0.9
1,851,926	-				+4.9
1,851,952	+		ABZR87_RS08715	0.11	-1.8
1,851,953	-		ABZR87_RS08715	0.11	-2.1
1,851,953	-		ABZR87_RS08715	0.11	-0.7
1,851,953	-		ABZR87_RS08715	0.11	-0.1
1,851,953	-		ABZR87_RS08715	0.11	-0.3
1,852,026	+		ABZR87_RS08715	0.19	-2.2
1,852,026	+		ABZR87_RS08715	0.19	-0.6
1,852,026	+		ABZR87_RS08715	0.19	-0.4
1,852,026	+		ABZR87_RS08715	0.19	-0.5
1,852,027	-		ABZR87_RS08715	0.19	-1.6
1,852,027	-		ABZR87_RS08715	0.19	-0.4
1,852,029	-		ABZR87_RS08715	0.19	-0.6
1,852,029	-		ABZR87_RS08715	0.19	-0.3
1,852,029	-		ABZR87_RS08715	0.19	-0.7
1,852,065	-		ABZR87_RS08715	0.23	-0.7
1,852,082	+		ABZR87_RS08715	0.25	-3.0
1,852,083	-		ABZR87_RS08715	0.25	-0.3
1,852,102	+		ABZR87_RS08715	0.27	-0.9
1,852,102	+		ABZR87_RS08715	0.27	+0.3
1,852,144	+		ABZR87_RS08715	0.31	+0.5
1,852,144	+		ABZR87_RS08715	0.31	-0.5
1,852,144	+		ABZR87_RS08715	0.31	-0.9
1,852,144	+		ABZR87_RS08715	0.31	-1.5
1,852,144	+		ABZR87_RS08715	0.31	-1.2
1,852,144	+		ABZR87_RS08715	0.31	-1.8
1,852,144	+		ABZR87_RS08715	0.31	-1.2
1,852,144	+		ABZR87_RS08715	0.31	-0.2
1,852,144	+		ABZR87_RS08715	0.31	-1.0
1,852,144	+		ABZR87_RS08715	0.31	-1.2
1,852,144	+		ABZR87_RS08715	0.31	-2.5
1,852,144	+		ABZR87_RS08715	0.31	-1.1
1,852,144	+		ABZR87_RS08715	0.31	-1.3
1,852,145	-		ABZR87_RS08715	0.31	-2.0
1,852,145	-		ABZR87_RS08715	0.31	-2.2
1,852,145	-		ABZR87_RS08715	0.31	-1.2
1,852,145	-		ABZR87_RS08715	0.31	-1.5
1,852,145	-		ABZR87_RS08715	0.31	-1.7
1,852,145	-		ABZR87_RS08715	0.31	-0.9
1,852,145	-		ABZR87_RS08715	0.31	-2.2
1,852,145	-		ABZR87_RS08715	0.31	-0.9
1,852,145	-		ABZR87_RS08715	0.31	-1.5
1,852,145	-		ABZR87_RS08715	0.31	-0.6
1,852,145	-		ABZR87_RS08715	0.31	-0.6
1,852,145	-		ABZR87_RS08715	0.31	-0.7
1,852,145	-		ABZR87_RS08715	0.31	-0.3
1,852,145	-		ABZR87_RS08715	0.31	-1.6
1,852,145	-		ABZR87_RS08715	0.31	-0.8
1,852,226	+		ABZR87_RS08715	0.40	-1.7
1,852,232	+		ABZR87_RS08715	0.40	-0.8
1,852,232	+		ABZR87_RS08715	0.40	-1.0
1,852,233	-		ABZR87_RS08715	0.40	-2.6
1,852,233	-		ABZR87_RS08715	0.40	-0.5
1,852,233	-		ABZR87_RS08715	0.40	-1.2
1,852,233	-		ABZR87_RS08715	0.40	-0.3
1,852,233	-		ABZR87_RS08715	0.40	-1.4
1,852,245	+		ABZR87_RS08715	0.42	-1.1
1,852,245	+		ABZR87_RS08715	0.42	-1.8
1,852,245	+		ABZR87_RS08715	0.42	-1.8
1,852,246	-		ABZR87_RS08715	0.42	+2.2
1,852,246	-		ABZR87_RS08715	0.42	-2.5
1,852,287	+		ABZR87_RS08715	0.46	-0.5
1,852,287	+		ABZR87_RS08715	0.46	-1.0
1,852,288	-		ABZR87_RS08715	0.46	-0.3
1,852,288	-		ABZR87_RS08715	0.46	-1.1
1,852,288	-		ABZR87_RS08715	0.46	-0.2
1,852,288	-		ABZR87_RS08715	0.46	+0.3
1,852,383	+		ABZR87_RS08715	0.56	-0.7
1,852,383	+		ABZR87_RS08715	0.56	-1.7
1,852,383	+		ABZR87_RS08715	0.56	-1.0
1,852,384	-		ABZR87_RS08715	0.56	+0.5
1,852,407	+		ABZR87_RS08715	0.59	-0.7
1,852,409	+		ABZR87_RS08715	0.59	-1.6
1,852,409	+		ABZR87_RS08715	0.59	-1.4
1,852,409	+		ABZR87_RS08715	0.59	+1.1
1,852,409	+		ABZR87_RS08715	0.59	-1.0
1,852,410	-		ABZR87_RS08715	0.59	-0.8
1,852,410	-		ABZR87_RS08715	0.59	+0.3
1,852,410	-		ABZR87_RS08715	0.59	+0.1
1,852,422	+		ABZR87_RS08715	0.60	-1.7
1,852,422	+		ABZR87_RS08715	0.60	-0.8
1,852,422	+		ABZR87_RS08715	0.60	-1.7
1,852,423	-		ABZR87_RS08715	0.60	+0.1
1,852,423	-		ABZR87_RS08715	0.60	-1.3
1,852,423	-		ABZR87_RS08715	0.60	-3.0
1,852,426	-		ABZR87_RS08715	0.61	-0.1
1,852,426	-		ABZR87_RS08715	0.61	+0.2
1,852,426	-		ABZR87_RS08715	0.61	+0.4
1,852,426	-		ABZR87_RS08715	0.61	+0.8
1,852,456	+		ABZR87_RS08715	0.64	-2.7
1,852,457	-		ABZR87_RS08715	0.64	+0.3
1,852,457	-		ABZR87_RS08715	0.64	-1.7
1,852,457	-		ABZR87_RS08715	0.64	-0.7
1,852,496	+		ABZR87_RS08715	0.68	-0.6
1,852,496	+		ABZR87_RS08715	0.68	-1.1
1,852,497	-		ABZR87_RS08715	0.68	-1.7
1,852,497	-		ABZR87_RS08715	0.68	-1.0
1,852,520	-		ABZR87_RS08715	0.70	-0.7
1,852,524	+		ABZR87_RS08715	0.71	-1.9
1,852,524	+		ABZR87_RS08715	0.71	-0.3
1,852,524	+		ABZR87_RS08715	0.71	-0.3
1,852,524	+		ABZR87_RS08715	0.71	-1.9
1,852,525	-		ABZR87_RS08715	0.71	-0.0
1,852,525	-		ABZR87_RS08715	0.71	+0.6
1,852,525	-		ABZR87_RS08715	0.71	-0.7
1,852,525	-		ABZR87_RS08715	0.71	-2.0
1,852,528	+		ABZR87_RS08715	0.71	-0.4
1,852,530	+		ABZR87_RS08715	0.71	-0.6
1,852,530	+		ABZR87_RS08715	0.71	-0.1
1,852,530	+		ABZR87_RS08715	0.71	-2.4
1,852,531	-		ABZR87_RS08715	0.71	-0.4
1,852,531	-		ABZR87_RS08715	0.71	-0.5
1,852,531	-		ABZR87_RS08715	0.71	-1.7
1,852,551	-		ABZR87_RS08715	0.74	-0.7
1,852,551	-		ABZR87_RS08715	0.74	-0.6
1,852,577	+		ABZR87_RS08715	0.76	-0.1
1,852,577	+		ABZR87_RS08715	0.76	-0.8
1,852,588	+		ABZR87_RS08715	0.77	-1.5
1,852,588	+		ABZR87_RS08715	0.77	-1.2
1,852,588	+		ABZR87_RS08715	0.77	-0.9
1,852,589	-		ABZR87_RS08715	0.77	-0.9
1,852,666	-		ABZR87_RS08715	0.85	-0.5
1,852,683	+		ABZR87_RS08715	0.87	-1.1
1,852,683	+		ABZR87_RS08715	0.87	-0.6
1,852,683	+		ABZR87_RS08715	0.87	-1.4
1,852,684	-		ABZR87_RS08715	0.87	-0.0
1,852,684	-		ABZR87_RS08715	0.87	-1.5
1,852,697	+		ABZR87_RS08715	0.89	-2.0
1,852,697	+		ABZR87_RS08715	0.89	-2.1
1,852,697	+		ABZR87_RS08715	0.89	-0.9
1,852,698	-		ABZR87_RS08715	0.89	-0.3
1,852,698	-		ABZR87_RS08715	0.89	-3.8
1,852,698	-		ABZR87_RS08715	0.89	-1.1
1,852,707	+		ABZR87_RS08715	0.90	-2.6
1,852,707	+		ABZR87_RS08715	0.90	-2.6
1,852,707	+		ABZR87_RS08715	0.90	-0.5
1,852,707	+		ABZR87_RS08715	0.90	-0.0
1,852,708	-		ABZR87_RS08715	0.90	-1.4
1,852,770	+				+0.1
1,852,799	+				-2.2
1,852,800	-				-0.4
1,852,803	+				-0.4
1,852,804	-				-2.1
1,852,844	+				-1.7
1,852,845	-				+1.5
1,852,846	+				-3.0
1,852,846	+				-2.1
1,852,846	+				-2.3
1,852,846	+				-3.5
1,852,846	+				-0.3
1,852,846	+				+0.9
1,852,846	+				-0.2
1,852,847	-				-2.6
1,852,847	-				-1.8
1,852,847	-				-1.3
1,852,847	-				+2.3
1,852,847	-				-0.8
1,852,847	-				-1.9
1,852,847	-				-1.8
1,852,862	-		ABZR87_RS08720	0.11	-1.1
1,852,886	+		ABZR87_RS08720	0.14	+0.3
1,852,886	+		ABZR87_RS08720	0.14	-1.1
1,852,886	+		ABZR87_RS08720	0.14	-0.6
1,852,891	-		ABZR87_RS08720	0.15	-1.2
1,852,909	+		ABZR87_RS08720	0.18	-0.2
1,852,915	-		ABZR87_RS08720	0.19	-1.3
1,853,025	-		ABZR87_RS08720	0.35	-1.3
1,853,026	+		ABZR87_RS08720	0.36	-1.9
1,853,026	+		ABZR87_RS08720	0.36	-2.0
1,853,027	-		ABZR87_RS08720	0.36	-2.5
1,853,033	+		ABZR87_RS08720	0.37	+0.8
1,853,033	+		ABZR87_RS08720	0.37	+0.3
1,853,033	+		ABZR87_RS08720	0.37	-2.3
1,853,034	-		ABZR87_RS08720	0.37	-2.2
1,853,034	-		ABZR87_RS08720	0.37	-1.4
1,853,034	-		ABZR87_RS08720	0.37	+0.1
1,853,034	-		ABZR87_RS08720	0.37	-2.2
1,853,037	+		ABZR87_RS08720	0.37	-0.8
1,853,038	-		ABZR87_RS08720	0.37	-0.9
1,853,038	-		ABZR87_RS08720	0.37	-0.7
1,853,038	-		ABZR87_RS08720	0.37	-2.0
1,853,038	-		ABZR87_RS08720	0.37	-1.2
1,853,038	-		ABZR87_RS08720	0.37	-0.7
1,853,038	-		ABZR87_RS08720	0.37	-0.5
1,853,038	-		ABZR87_RS08720	0.37	-3.3
1,853,075	+		ABZR87_RS08720	0.43	+1.7
1,853,075	+		ABZR87_RS08720	0.43	-0.5
1,853,075	+		ABZR87_RS08720	0.43	-1.7
1,853,075	+		ABZR87_RS08720	0.43	+1.1
1,853,075	+		ABZR87_RS08720	0.43	+0.3
1,853,076	-		ABZR87_RS08720	0.43	-1.0
1,853,076	-		ABZR87_RS08720	0.43	+5.2
1,853,076	-		ABZR87_RS08720	0.43	-0.1
1,853,076	-		ABZR87_RS08720	0.43	-0.6
1,853,099	-		ABZR87_RS08720	0.47	-0.7
1,853,106	+		ABZR87_RS08720	0.48	-0.6
1,853,107	-		ABZR87_RS08720	0.48	-1.3
1,853,107	-		ABZR87_RS08720	0.48	-0.9
1,853,111	+		ABZR87_RS08720	0.49	-1.9
1,853,112	-		ABZR87_RS08720	0.49	-0.6
1,853,112	-		ABZR87_RS08720	0.49	-1.2
1,853,182	+		ABZR87_RS08720	0.59	-0.2
1,853,249	-		ABZR87_RS08720	0.70	-1.6
1,853,251	-		ABZR87_RS08720	0.70	-0.3
1,853,263	+		ABZR87_RS08720	0.72	-0.0
1,853,264	-		ABZR87_RS08720	0.72	+1.1
1,853,264	-		ABZR87_RS08720	0.72	-1.1
1,853,280	+		ABZR87_RS08720	0.74	-2.3
1,853,280	+		ABZR87_RS08720	0.74	+1.1
1,853,310	+		ABZR87_RS08720	0.79	-2.5
1,853,311	-		ABZR87_RS08720	0.79	-0.9
1,853,311	-		ABZR87_RS08720	0.79	-2.7
1,853,336	+		ABZR87_RS08720	0.83	-2.3
1,853,355	+		ABZR87_RS08720	0.86	-1.3
1,853,356	-		ABZR87_RS08720	0.86	-2.5
1,853,415	+				-2.2
1,853,416	-				-3.2
1,853,416	-				-0.4
1,853,416	-				-0.9
1,853,421	-				-1.7
1,853,421	-				-1.5
1,853,421	-				-2.8
1,853,441	+				+1.1
1,853,441	+				+0.8
1,853,441	+				-0.6
1,853,441	+				+3.3
1,853,442	-				+0.2
1,853,442	-				-2.6
1,853,442	-				-0.6
1,853,442	-				-0.7
1,853,442	-				+1.1
1,853,477	+				-0.9
1,853,477	+				-0.3
1,853,478	-				+0.8
1,853,532	+				-0.6
1,853,532	+				-0.8
1,853,532	+				-0.9
1,853,532	+				-1.3
1,853,532	+				-1.1
1,853,533	-				-0.6
1,853,533	-				-2.0
1,853,595	+		ABZR87_RS08725	0.13	-1.7
1,853,595	+		ABZR87_RS08725	0.13	+0.2
1,853,605	+		ABZR87_RS08725	0.14	-1.4
1,853,605	+		ABZR87_RS08725	0.14	-0.9
1,853,606	-		ABZR87_RS08725	0.14	-1.5
1,853,606	-		ABZR87_RS08725	0.14	-1.5
1,853,606	-		ABZR87_RS08725	0.14	+0.3
1,853,606	-		ABZR87_RS08725	0.14	-0.8
1,853,623	+		ABZR87_RS08725	0.15	-0.5
1,853,623	+		ABZR87_RS08725	0.15	-2.1
1,853,623	+		ABZR87_RS08725	0.15	-1.5
1,853,623	+		ABZR87_RS08725	0.15	-1.1
1,853,623	+		ABZR87_RS08725	0.15	-1.7
1,853,623	+		ABZR87_RS08725	0.15	-0.5
1,853,623	+		ABZR87_RS08725	0.15	-0.9
1,853,623	+		ABZR87_RS08725	0.15	+0.1
1,853,623	+		ABZR87_RS08725	0.15	-1.2
1,853,623	+		ABZR87_RS08725	0.15	-0.4
1,853,624	-		ABZR87_RS08725	0.15	-0.6
1,853,624	-		ABZR87_RS08725	0.15	-2.4
1,853,624	-		ABZR87_RS08725	0.15	-2.4
1,853,624	-		ABZR87_RS08725	0.15	-2.8
1,853,624	-		ABZR87_RS08725	0.15	-0.5
1,853,624	-		ABZR87_RS08725	0.15	-0.1
1,853,705	+		ABZR87_RS08725	0.22	-3.1
1,853,705	+		ABZR87_RS08725	0.22	-0.2
1,853,706	-		ABZR87_RS08725	0.22	-0.8
1,853,706	-		ABZR87_RS08725	0.22	-1.7
1,853,706	-		ABZR87_RS08725	0.22	-1.0
1,853,716	+		ABZR87_RS08725	0.23	-1.2
1,853,716	+		ABZR87_RS08725	0.23	-1.0
1,853,717	-		ABZR87_RS08725	0.23	-0.6
1,853,801	+		ABZR87_RS08725	0.31	-0.9
1,853,802	-		ABZR87_RS08725	0.31	-0.8
1,853,945	+		ABZR87_RS08725	0.43	-0.4
1,853,946	-		ABZR87_RS08725	0.43	-0.3
1,853,946	-		ABZR87_RS08725	0.43	-1.0
1,853,946	-		ABZR87_RS08725	0.43	+0.2
1,853,946	-		ABZR87_RS08725	0.43	-1.2
1,853,946	-		ABZR87_RS08725	0.43	-0.1
1,853,946	-		ABZR87_RS08725	0.43	-1.1
1,853,946	-		ABZR87_RS08725	0.43	-0.6
1,853,993	+		ABZR87_RS08725	0.47	-1.3
1,853,993	+		ABZR87_RS08725	0.47	-1.7
1,853,993	+		ABZR87_RS08725	0.47	-1.2
1,853,993	+		ABZR87_RS08725	0.47	-3.5
1,853,994	-		ABZR87_RS08725	0.47	-2.4
1,853,994	-		ABZR87_RS08725	0.47	-0.4
1,853,994	-		ABZR87_RS08725	0.47	-0.4
1,853,994	-		ABZR87_RS08725	0.47	-0.1
1,854,060	-		ABZR87_RS08725	0.53	-1.7
1,854,060	-		ABZR87_RS08725	0.53	-1.7
1,854,060	-		ABZR87_RS08725	0.53	-0.6
1,854,060	-		ABZR87_RS08725	0.53	+0.2
1,854,060	-		ABZR87_RS08725	0.53	+0.4
1,854,060	-		ABZR87_RS08725	0.53	-0.6
1,854,060	-		ABZR87_RS08725	0.53	-1.2
1,854,090	+		ABZR87_RS08725	0.55	-2.9
1,854,090	+		ABZR87_RS08725	0.55	-1.4
1,854,090	+		ABZR87_RS08725	0.55	+2.3
1,854,090	+		ABZR87_RS08725	0.55	-1.9
1,854,090	+		ABZR87_RS08725	0.55	-1.4
1,854,091	-		ABZR87_RS08725	0.55	-0.8
1,854,091	-		ABZR87_RS08725	0.55	-1.6
1,854,091	-		ABZR87_RS08725	0.55	-0.5
1,854,091	-		ABZR87_RS08725	0.55	-2.0
1,854,091	-		ABZR87_RS08725	0.55	-0.7
1,854,091	-		ABZR87_RS08725	0.55	-0.3
1,854,091	-		ABZR87_RS08725	0.55	-1.0
1,854,091	-		ABZR87_RS08725	0.55	-0.3
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1,854,091	-		ABZR87_RS08725	0.55	-1.5
1,854,091	-		ABZR87_RS08725	0.55	-1.8
1,854,102	+		ABZR87_RS08725	0.56	-1.0
1,854,102	+		ABZR87_RS08725	0.56	-0.2
1,854,102	+		ABZR87_RS08725	0.56	-1.6
1,854,102	+		ABZR87_RS08725	0.56	-1.3
1,854,102	+		ABZR87_RS08725	0.56	-3.1
1,854,103	-		ABZR87_RS08725	0.56	-0.9
1,854,283	+		ABZR87_RS08725	0.72	-0.9
1,854,283	+		ABZR87_RS08725	0.72	-1.9
1,854,283	+		ABZR87_RS08725	0.72	-0.9
1,854,283	+		ABZR87_RS08725	0.72	-2.9
1,854,284	-		ABZR87_RS08725	0.72	-2.5
1,854,289	+		ABZR87_RS08725	0.72	-1.7
1,854,308	+		ABZR87_RS08725	0.74	-0.6
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1,854,308	+		ABZR87_RS08725	0.74	-2.0
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1,854,324	+		ABZR87_RS08725	0.75	-1.7
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1,854,324	+		ABZR87_RS08725	0.75	-1.6
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1,854,358	+		ABZR87_RS08725	0.78	-1.7
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1,854,421	-		ABZR87_RS08725	0.83	+0.1
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1,854,444	+		ABZR87_RS08725	0.85	-0.2
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