Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3137

Experiment: acetate; Light intensity 38 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 38 uM
3,616,242	-				+0.1
3,616,383	-				-1.6
3,616,517	+		Rru_A3136	0.18	+0.1
3,616,517	+		Rru_A3136	0.18	+0.1
3,616,517	+		Rru_A3136	0.18	+0.1
3,616,518	-		Rru_A3136	0.19	-1.5
3,616,518	-		Rru_A3136	0.19	-1.1
3,616,519	+		Rru_A3136	0.19	+0.1
3,616,519	+		Rru_A3136	0.19	-1.7
3,616,519	+		Rru_A3136	0.19	-1.9
3,616,519	+		Rru_A3136	0.19	-0.9
3,616,519	+		Rru_A3136	0.19	-0.9
3,616,519	+		Rru_A3136	0.19	+0.1
3,616,520	-		Rru_A3136	0.19	-1.8
3,616,520	-		Rru_A3136	0.19	+0.1
3,616,758	-		Rru_A3136	0.57	-2.7
3,616,939	+		Rru_A3136	0.85	-1.6
3,617,006	+				+0.1
3,617,006	+				-2.6
3,617,040	-				-2.3
3,617,040	-				-0.9
3,617,166	+				+0.1
3,617,167	-				+0.1
3,617,167	-				+0.1
3,617,171	+				+1.1
3,617,171	+				+0.1
3,617,172	-				-0.9
3,617,172	-				-3.2
3,617,172	-				+1.1
3,617,172	-				-0.5
3,617,172	-				+0.1
3,617,172	-				-0.5
3,617,172	-				+1.7
3,617,172	-				-0.7
3,617,172	-				-2.0
3,617,172	-				-2.3
3,617,172	-				-0.9
3,617,173	+				-1.1
3,617,173	+				-1.6
3,617,174	-				-1.2
3,617,174	-				+0.1
3,617,174	-				-2.3
3,617,174	-				+0.1
3,617,174	-				-2.2
3,617,480	+				+0.1
3,617,480	+				+0.1
3,617,481	-				-2.7
3,617,481	-				+0.1
3,617,481	-				-2.1
3,617,481	-				+0.1
3,617,508	+		Rru_A3137	0.11	-1.2
3,617,581	+		Rru_A3137	0.14	+0.9
3,617,581	+		Rru_A3137	0.14	+0.1
3,617,581	+		Rru_A3137	0.14	+0.2
3,617,581	+		Rru_A3137	0.14	-0.5
3,617,581	+		Rru_A3137	0.14	+0.9
3,617,581	+		Rru_A3137	0.14	-2.8
3,617,582	-		Rru_A3137	0.14	-0.1
3,617,582	-		Rru_A3137	0.14	+0.5
3,617,582	-		Rru_A3137	0.14	+0.1
3,617,582	-		Rru_A3137	0.14	+0.1
3,617,582	-		Rru_A3137	0.14	+0.5
3,617,582	-		Rru_A3137	0.14	-0.3
3,617,582	-		Rru_A3137	0.14	-1.5
3,617,584	-		Rru_A3137	0.14	+0.1
3,617,584	-		Rru_A3137	0.14	+1.1
3,617,603	+		Rru_A3137	0.15	-1.9
3,617,604	-		Rru_A3137	0.15	-0.9
3,617,668	+		Rru_A3137	0.17	-0.8
3,617,669	-		Rru_A3137	0.17	-2.1
3,617,721	-		Rru_A3137	0.19	-0.9
3,617,721	-		Rru_A3137	0.19	-0.9
3,617,756	+		Rru_A3137	0.21	+3.3
3,617,756	+		Rru_A3137	0.21	-1.4
3,617,756	+		Rru_A3137	0.21	+0.1
3,617,756	+		Rru_A3137	0.21	+1.7
3,617,756	+		Rru_A3137	0.21	-1.5
3,617,756	+		Rru_A3137	0.21	-1.8
3,617,756	+		Rru_A3137	0.21	-1.9
3,617,756	+		Rru_A3137	0.21	+0.1
3,617,757	-		Rru_A3137	0.21	+0.1
3,617,757	-		Rru_A3137	0.21	-0.3
3,617,757	-		Rru_A3137	0.21	-0.7
3,617,757	-		Rru_A3137	0.21	-0.7
3,617,757	-		Rru_A3137	0.21	+0.1
3,617,780	+		Rru_A3137	0.22	-2.9
3,617,781	-		Rru_A3137	0.22	+1.3
3,617,813	+		Rru_A3137	0.23	-1.0
3,617,813	+		Rru_A3137	0.23	-1.2
3,617,813	+		Rru_A3137	0.23	+0.1
3,617,813	+		Rru_A3137	0.23	+0.1
3,617,813	+		Rru_A3137	0.23	-0.5
3,617,814	-		Rru_A3137	0.23	-1.5
3,617,814	-		Rru_A3137	0.23	-1.8
3,617,814	-		Rru_A3137	0.23	+0.1
3,617,814	-		Rru_A3137	0.23	-2.2
3,617,814	-		Rru_A3137	0.23	+0.1
3,617,814	-		Rru_A3137	0.23	+0.1
3,617,814	-		Rru_A3137	0.23	-0.9
3,617,814	-		Rru_A3137	0.23	+0.8
3,617,819	+		Rru_A3137	0.23	-1.8
3,617,819	+		Rru_A3137	0.23	-0.9
3,617,820	-		Rru_A3137	0.23	-0.9
3,617,820	-		Rru_A3137	0.23	-1.0
3,617,873	+		Rru_A3137	0.25	-2.0
3,617,874	-		Rru_A3137	0.25	+0.1
3,617,874	-		Rru_A3137	0.25	-1.3
3,617,874	-		Rru_A3137	0.25	-0.1
3,617,874	-		Rru_A3137	0.25	+0.1
3,617,874	-		Rru_A3137	0.25	+0.1
3,617,874	-		Rru_A3137	0.25	+0.1
3,617,971	+		Rru_A3137	0.29	-0.9
3,617,971	+		Rru_A3137	0.29	-2.7
3,617,972	-		Rru_A3137	0.29	+0.1
3,618,029	+		Rru_A3137	0.31	-2.7
3,618,032	+		Rru_A3137	0.31	-1.5
3,618,032	+		Rru_A3137	0.31	-3.1
3,618,033	-		Rru_A3137	0.31	-1.5
3,618,033	-		Rru_A3137	0.31	+0.7
3,618,341	+		Rru_A3137	0.43	+0.1
3,618,342	-		Rru_A3137	0.43	-1.5
3,618,342	-		Rru_A3137	0.43	+0.1
3,618,342	-		Rru_A3137	0.43	+0.1
3,618,344	-		Rru_A3137	0.44	+0.1
3,618,344	-		Rru_A3137	0.44	+1.1
3,618,398	+		Rru_A3137	0.46	+0.1
3,618,399	-		Rru_A3137	0.46	-1.5
3,618,608	+		Rru_A3137	0.54	-1.4
3,618,608	+		Rru_A3137	0.54	-1.9
3,618,608	+		Rru_A3137	0.54	+0.1
3,618,608	+		Rru_A3137	0.54	-2.2
3,618,608	+		Rru_A3137	0.54	+0.1
3,618,608	+		Rru_A3137	0.54	-1.5
3,618,755	+		Rru_A3137	0.60	+0.1
3,618,755	+		Rru_A3137	0.60	-0.9
3,618,756	-		Rru_A3137	0.60	+0.1
3,618,756	-		Rru_A3137	0.60	+0.1
3,618,756	-		Rru_A3137	0.60	-0.2
3,618,756	-		Rru_A3137	0.60	+0.1
3,618,757	+		Rru_A3137	0.60	+0.1
3,618,776	+		Rru_A3137	0.60	-0.9
3,618,777	-		Rru_A3137	0.60	-1.5
3,618,777	-		Rru_A3137	0.60	+0.1
3,618,845	+		Rru_A3137	0.63	-1.6
3,618,845	+		Rru_A3137	0.63	+0.1
3,618,846	-		Rru_A3137	0.63	-0.5
3,618,905	+		Rru_A3137	0.65	-2.5
3,618,905	+		Rru_A3137	0.65	-2.5
3,618,905	+		Rru_A3137	0.65	-1.5
3,618,906	-		Rru_A3137	0.65	-1.6
3,618,906	-		Rru_A3137	0.65	-1.5
3,618,936	-		Rru_A3137	0.67	+0.1
3,618,936	-		Rru_A3137	0.67	-4.8
3,618,955	+		Rru_A3137	0.67	-2.3
3,619,461	-		Rru_A3137	0.87	+0.1
3,619,475	+		Rru_A3137	0.88	+0.1
3,619,475	+		Rru_A3137	0.88	+0.1
3,619,791	-				-0.7
3,619,978	-		Rru_A3138	0.13	-0.2
3,620,316	+		Rru_A3138	0.40	-1.6
3,620,316	+		Rru_A3138	0.40	+0.1
3,620,317	-		Rru_A3138	0.40	-0.7
3,620,317	-		Rru_A3138	0.40	-0.9
3,620,319	+		Rru_A3138	0.40	-1.5
3,620,319	+		Rru_A3138	0.40	+0.1
3,620,320	-		Rru_A3138	0.40	-1.0
3,620,445	+		Rru_A3138	0.50	-2.0
3,620,445	+		Rru_A3138	0.50	+0.1
3,620,445	+		Rru_A3138	0.50	+0.1
3,620,446	-		Rru_A3138	0.50	+0.1
3,620,523	+		Rru_A3138	0.57	+0.1
3,620,523	+		Rru_A3138	0.57	+0.1
3,620,524	-		Rru_A3138	0.57	+0.1