Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12220

Experiment: Minimal media pH8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH8
2,781,456	+				+0.8
2,781,456	+				+0.5
2,781,457	-				-0.7
2,781,457	-				-0.7
2,781,457	-				-0.5
2,781,473	-				-0.6
2,781,482	+				+0.3
2,781,482	+				+1.3
2,781,486	+				-0.7
2,781,487	-				-1.9
2,781,487	-				+0.7
2,781,498	+				+0.5
2,781,526	+				-0.1
2,781,527	-				-0.0
2,781,549	+				+1.6
2,782,081	-				+0.1
2,782,102	-				-0.0
2,782,103	+				-0.2
2,782,147	-				-0.9
2,782,175	+				-0.9
2,782,175	+				+0.7
2,782,189	+				+0.2
2,782,189	+				+0.7
2,782,249	+				+0.2
2,782,250	-				+0.1
2,782,280	-				+0.9
2,782,322	-				+0.9
2,782,351	+				+0.6
2,782,442	+				+1.9
2,782,442	+				+0.5
2,782,442	+				+1.3
2,782,443	-				+0.4
2,782,443	-				-0.5
2,782,456	-				+0.4
2,782,456	-				+0.6
2,782,456	-				-0.9
2,782,489	+				+0.3
2,782,489	+				+0.0
2,782,490	-				-0.5
2,782,490	-				-2.8
2,782,490	-				+0.6
2,782,490	-				-0.2
2,782,495	+				+0.1
2,782,496	-				+0.6
2,782,496	-				+0.4
2,782,496	-				+0.4
2,782,502	+				-0.5
2,782,502	+				+0.4
2,782,503	-				-0.4
2,782,535	+				-0.1
2,782,535	+				-0.0
2,782,536	-				+1.3
2,782,536	-				-0.6
2,782,538	+				-0.2
2,782,538	+				+0.5
2,782,561	+				-1.0
2,782,562	-				-0.1
2,782,562	-				+0.7
2,782,574	+				-0.7
2,782,574	+				-1.6
2,782,607	-				+0.6
2,782,607	-				-0.4
2,782,607	-				+1.0
2,782,642	+				+0.5
2,782,643	-				+0.6
2,782,645	+				-0.5
2,782,645	+				+0.2
2,782,645	+				+0.7
2,782,645	+				+0.6
2,782,645	+				+0.6
2,782,646	-				+1.6
2,782,646	-				+0.7
2,782,646	-				+0.5
2,782,759	+				-1.0
2,782,759	+				-0.5
2,782,760	-				+0.8
2,782,760	-				+0.3
2,782,760	-				+1.3
2,782,762	+				+0.5
2,782,762	+				-0.5
2,782,763	-				-0.7
2,782,763	-				+0.1
2,782,834	+				-0.6
2,782,834	+				+0.2
2,782,834	+				+0.7
2,782,835	-				+0.9
2,782,835	-				+0.0
2,782,964	-		AO356_12220	0.13	+0.4
2,783,026	+		AO356_12220	0.14	-0.3
2,783,026	+		AO356_12220	0.14	+0.6
2,783,026	+		AO356_12220	0.14	+0.6
2,783,026	+		AO356_12220	0.14	-0.1
2,783,026	+		AO356_12220	0.14	+0.6
2,783,027	-		AO356_12220	0.14	+0.0
2,783,027	-		AO356_12220	0.14	+0.4
2,783,027	-		AO356_12220	0.14	+0.4
2,783,110	+		AO356_12220	0.17	+0.9
2,783,110	+		AO356_12220	0.17	-0.1
2,783,111	-		AO356_12220	0.17	+0.5
2,783,185	+		AO356_12220	0.18	+1.1
2,783,185	+		AO356_12220	0.18	+0.2
2,783,186	-		AO356_12220	0.18	-0.2
2,783,186	-		AO356_12220	0.18	+0.9
2,783,251	+		AO356_12220	0.20	+0.7
2,783,252	-		AO356_12220	0.20	-0.5
2,783,259	+		AO356_12220	0.20	-0.1
2,783,259	+		AO356_12220	0.20	+0.8
2,783,259	+		AO356_12220	0.20	+0.7
2,783,259	+		AO356_12220	0.20	-1.8
2,783,259	+		AO356_12220	0.20	+0.2
2,783,260	-		AO356_12220	0.20	-0.4
2,783,260	-		AO356_12220	0.20	-0.1
2,783,260	-		AO356_12220	0.20	-0.4
2,783,323	+		AO356_12220	0.22	+1.4
2,783,413	+		AO356_12220	0.24	-0.9
2,783,414	-		AO356_12220	0.24	-0.1
2,783,599	+		AO356_12220	0.29	+1.4
2,783,599	+		AO356_12220	0.29	+0.4
2,783,599	+		AO356_12220	0.29	+0.6
2,783,734	+		AO356_12220	0.32	+0.4
2,783,735	-		AO356_12220	0.32	+1.2
2,783,740	+		AO356_12220	0.32	-0.5
2,783,740	+		AO356_12220	0.32	-0.1
2,783,740	+		AO356_12220	0.32	-0.6
2,783,740	+		AO356_12220	0.32	-0.4
2,783,741	-		AO356_12220	0.32	+0.8
2,783,741	-		AO356_12220	0.32	+0.4
2,783,741	-		AO356_12220	0.32	+0.3
2,783,838	-		AO356_12220	0.35	+0.5
2,783,905	+		AO356_12220	0.36	-0.1
2,783,905	+		AO356_12220	0.36	-0.3
2,783,905	+		AO356_12220	0.36	+0.9
2,783,906	-		AO356_12220	0.36	+0.2
2,783,911	+		AO356_12220	0.36	-0.1
2,784,101	-		AO356_12220	0.41	+1.0
2,784,220	+		AO356_12220	0.44	-1.4
2,784,221	-		AO356_12220	0.44	-1.5
2,784,221	-		AO356_12220	0.44	+1.2
2,784,268	+		AO356_12220	0.45	+0.8
2,784,284	-		AO356_12220	0.46	-0.1
2,784,284	-		AO356_12220	0.46	-0.7
2,784,478	+		AO356_12220	0.51	+1.4
2,784,478	+		AO356_12220	0.51	+0.1
2,784,479	-		AO356_12220	0.51	-0.9
2,784,479	-		AO356_12220	0.51	+0.4
2,784,479	-		AO356_12220	0.51	+0.9
2,784,601	+		AO356_12220	0.54	-0.2
2,784,602	-		AO356_12220	0.54	-0.1
2,784,613	+		AO356_12220	0.54	+0.8
2,784,613	+		AO356_12220	0.54	-0.9
2,784,614	-		AO356_12220	0.54	+0.0
2,784,614	-		AO356_12220	0.54	+0.7
2,784,700	+		AO356_12220	0.56	+0.6
2,784,700	+		AO356_12220	0.56	+0.3
2,784,701	-		AO356_12220	0.56	+0.1
2,784,701	-		AO356_12220	0.56	+0.1
2,784,701	-		AO356_12220	0.56	+0.8
2,784,790	+		AO356_12220	0.58	+0.8
2,784,790	+		AO356_12220	0.58	+1.1
2,784,791	-		AO356_12220	0.58	-1.0
2,784,791	-		AO356_12220	0.58	-0.4
2,784,791	-		AO356_12220	0.58	+0.4
2,784,803	-		AO356_12220	0.59	-1.5
2,784,871	+		AO356_12220	0.60	+0.2
2,784,871	+		AO356_12220	0.60	-0.3
2,784,871	+		AO356_12220	0.60	-0.2
2,784,872	-		AO356_12220	0.60	+0.0
2,784,872	-		AO356_12220	0.60	+0.0
2,784,872	-		AO356_12220	0.60	+0.5
2,784,872	-		AO356_12220	0.60	+0.9
2,784,945	+		AO356_12220	0.62	-0.1
2,784,945	+		AO356_12220	0.62	-0.1
2,784,945	+		AO356_12220	0.62	-0.2
2,784,945	+		AO356_12220	0.62	-0.1
2,784,945	+		AO356_12220	0.62	+0.8
2,784,945	+		AO356_12220	0.62	+0.7
2,784,945	+		AO356_12220	0.62	+0.7
2,785,000	+		AO356_12220	0.64	-0.1
2,785,000	+		AO356_12220	0.64	+0.4
2,785,001	-		AO356_12220	0.64	-0.9
2,785,001	-		AO356_12220	0.64	+0.1
2,785,034	-		AO356_12220	0.64	-0.3
2,785,135	+		AO356_12220	0.67	-0.5
2,785,226	-		AO356_12220	0.69	+0.3
2,785,360	+		AO356_12220	0.73	-0.4
2,785,361	-		AO356_12220	0.73	+0.8
2,785,414	+		AO356_12220	0.74	-0.4
2,785,471	+		AO356_12220	0.75	-0.7
2,785,471	+		AO356_12220	0.75	+0.5
2,785,472	-		AO356_12220	0.75	+0.6
2,785,472	-		AO356_12220	0.75	+0.1
2,785,472	-		AO356_12220	0.75	+0.9
2,785,472	-		AO356_12220	0.75	+0.7
2,786,023	+		AO356_12220	0.89	+1.1
2,786,024	-		AO356_12220	0.89	+0.4
2,786,202	+				-0.4
2,786,379	+				-0.3
2,786,379	+				+0.0
2,786,379	+				+0.7
2,786,379	+				+1.9
2,786,380	-				-0.3
2,786,380	-				+0.2
2,786,380	-				-1.7
2,786,380	-				+0.2
2,786,380	-				-0.5
2,786,380	-				-0.9
2,786,824	-				-0.3
2,786,892	+				-0.3
2,786,893	-				+0.4
2,786,899	+				+0.3
2,786,937	+				+1.6
2,786,937	+				+0.1
2,786,937	+				+0.1
2,786,937	+				+0.2
2,786,937	+				+0.6
2,786,937	+				+1.0
2,786,938	-				-0.4
2,786,938	-				+0.5
2,786,938	-				-0.8
2,786,938	-				+1.5
2,786,938	-				+0.1
2,786,938	-				+0.8
2,786,938	-				-0.1
2,786,938	-				+0.3
2,786,938	-				-0.3
2,787,111	+				+0.3
2,787,112	-				-0.3
2,787,138	+				-0.5
2,787,138	+				+1.9
2,787,213	+				+0.2
2,787,214	-				+0.2
2,787,214	-				+0.2
2,787,303	+		AO356_12230	0.11	+0.1
2,787,309	+		AO356_12230	0.11	-0.1
2,787,310	-		AO356_12230	0.11	-0.4
2,787,393	+		AO356_12230	0.13	-0.8
2,787,393	+		AO356_12230	0.13	-0.7
2,787,393	+		AO356_12230	0.13	-0.2
2,787,393	+		AO356_12230	0.13	-0.8
2,787,393	+		AO356_12230	0.13	+0.3
2,787,393	+		AO356_12230	0.13	-0.7
2,787,394	-		AO356_12230	0.13	+0.3
2,787,394	-		AO356_12230	0.13	+1.1
2,787,394	-		AO356_12230	0.13	-0.1
2,787,394	-		AO356_12230	0.13	+0.6
2,787,420	+		AO356_12230	0.13	+1.5
2,787,421	-		AO356_12230	0.13	+0.3
2,787,456	+		AO356_12230	0.14	+0.2
2,787,456	+		AO356_12230	0.14	-0.1
2,787,456	+		AO356_12230	0.14	+0.8
2,787,456	+		AO356_12230	0.14	-0.2