Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10945

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
2,388,866	+				+0.4
2,388,866	+				-0.4
2,388,866	+				-0.3
2,388,866	+				-0.2
2,388,866	+				-1.3
2,388,866	+				-0.1
2,388,866	+				-0.2
2,388,866	+				-0.8
2,388,866	+				-0.2
2,388,866	+				-0.9
2,388,866	+				-0.3
2,388,866	+				-1.6
2,388,866	+				+0.4
2,388,866	+				-1.6
2,388,867	-				-0.3
2,388,867	-				+0.6
2,388,867	-				+0.6
2,388,867	-				+0.3
2,388,867	-				+0.2
2,388,868	+				+1.7
2,388,868	+				+0.0
2,388,868	+				-0.0
2,388,868	+				-1.2
2,388,868	+				+0.4
2,388,868	+				+0.6
2,388,868	+				-0.5
2,388,868	+				-0.3
2,388,869	-				-0.1
2,388,904	+				+0.7
2,388,904	+				-0.2
2,388,928	+				-0.0
2,388,945	+				-0.4
2,388,945	+				-0.7
2,388,983	+				-1.4
2,388,983	+				+1.4
2,389,000	+				+0.2
2,389,000	+				+1.5
2,389,000	+				-0.4
2,389,000	+				-0.8
2,389,001	-				-0.3
2,389,026	+		AO353_10940	0.14	+0.3
2,389,026	+		AO353_10940	0.14	-0.8
2,389,027	-		AO353_10940	0.15	-0.5
2,389,040	+		AO353_10940	0.19	+0.4
2,389,040	+		AO353_10940	0.19	-0.1
2,389,040	+		AO353_10940	0.19	-0.7
2,389,062	+		AO353_10940	0.27	-0.2
2,389,062	+		AO353_10940	0.27	-1.0
2,389,063	-		AO353_10940	0.27	-0.2
2,389,157	+		AO353_10940	0.59	-0.7
2,389,157	+		AO353_10940	0.59	-0.4
2,389,157	+		AO353_10940	0.59	-0.6
2,389,285	+				-0.2
2,389,285	+				+1.9
2,389,285	+				-0.8
2,389,285	+				+1.0
2,389,286	-				+0.6
2,389,306	+				-0.4
2,389,306	+				+0.4
2,389,306	+				-0.6
2,389,315	+				+1.4
2,389,450	-		AO353_10945	0.21	-1.2
2,389,604	-		AO353_10945	0.47	+1.2
2,389,604	-		AO353_10945	0.47	-1.3
2,389,644	+		AO353_10945	0.53	-0.2
2,389,645	-		AO353_10945	0.53	+0.6
2,389,729	-		AO353_10945	0.67	+0.2
2,389,729	-		AO353_10945	0.67	+0.4
2,389,786	+		AO353_10945	0.77	-1.8
2,389,786	+		AO353_10945	0.77	-2.2
2,389,787	-		AO353_10945	0.77	-0.4
2,389,787	-		AO353_10945	0.77	+0.6
2,389,828	-		AO353_10945	0.84	-1.0
2,389,924	+				-0.5
2,389,924	+				+0.8
2,389,924	+				+0.1
2,389,924	+				+0.3
2,389,925	-				-0.1
2,389,925	-				+1.7
2,390,003	+				+0.2
2,390,003	+				+0.9
2,390,004	-				+0.6
2,390,004	-				-0.9
2,390,004	-				+1.4
2,390,017	+				+0.8
2,390,017	+				+0.6
2,390,017	+				+0.1
2,390,018	-				-0.3
2,390,018	-				-1.2
2,390,048	-				+0.7
2,390,052	+				-0.9
2,390,052	+				-0.4
2,390,052	+				+1.7
2,390,053	-				-2.5
2,390,053	-				-0.2
2,390,053	-				-0.5
2,390,053	-				+0.7
2,390,053	-				-1.4
2,390,053	-				-0.0
2,390,053	-				-0.4
2,390,060	+				-0.4
2,390,060	+				-0.4
2,390,061	-				-0.3
2,390,061	-				-0.8
2,390,061	-				-0.3
2,390,061	-				+1.0
2,390,121	+				-0.2
2,390,121	+				+0.8
2,390,121	+				+0.8
2,390,122	-				-1.6
2,390,122	-				+0.4
2,390,122	-				-1.7
2,390,122	-				-0.2
2,390,122	-				-2.0
2,390,133	-				+0.9
2,390,133	-				-0.6
2,390,133	-				+0.3
2,390,133	-				+1.3
2,390,133	-				+1.2
2,390,177	+				+0.0
2,390,177	+				+0.1
2,390,177	+				-1.0
2,390,178	-				-1.0
2,390,220	+		AO353_10950	0.15	-1.1
2,390,220	+		AO353_10950	0.15	+0.4
2,390,220	+		AO353_10950	0.15	+0.8
2,390,220	+		AO353_10950	0.15	-0.5
2,390,220	+		AO353_10950	0.15	-0.5
2,390,220	+		AO353_10950	0.15	+0.4
2,390,220	+		AO353_10950	0.15	+0.4
2,390,220	+		AO353_10950	0.15	-1.7
2,390,220	+		AO353_10950	0.15	+0.2
2,390,220	+		AO353_10950	0.15	-1.3
2,390,220	+		AO353_10950	0.15	-0.3
2,390,221	-		AO353_10950	0.15	-0.1
2,390,221	-		AO353_10950	0.15	+0.2
2,390,221	-		AO353_10950	0.15	+0.4
2,390,221	-		AO353_10950	0.15	-1.7
2,390,221	-		AO353_10950	0.15	-0.2
2,390,221	-		AO353_10950	0.15	-0.6
2,390,221	-		AO353_10950	0.15	+0.6
2,390,221	-		AO353_10950	0.15	-1.5
2,390,221	-		AO353_10950	0.15	+0.2
2,390,221	-		AO353_10950	0.15	-2.2
2,390,307	+		AO353_10950	0.29	+0.6
2,390,307	+		AO353_10950	0.29	-0.6
2,390,307	+		AO353_10950	0.29	-1.8
2,390,307	+		AO353_10950	0.29	-1.4
2,390,308	-		AO353_10950	0.29	-0.0
2,390,308	-		AO353_10950	0.29	+0.2
2,390,308	-		AO353_10950	0.29	-0.8
2,390,308	-		AO353_10950	0.29	+0.2
2,390,308	-		AO353_10950	0.29	-0.2
2,390,308	-		AO353_10950	0.29	-1.6
2,390,310	-		AO353_10950	0.29	-0.4
2,390,372	+		AO353_10950	0.39	+0.7
2,390,372	+		AO353_10950	0.39	+0.6
2,390,373	-		AO353_10950	0.39	+0.4
2,390,393	+		AO353_10950	0.42	+0.4
2,390,393	+		AO353_10950	0.42	-1.8
2,390,418	+		AO353_10950	0.46	-0.3
2,390,418	+		AO353_10950	0.46	+1.6
2,390,418	+		AO353_10950	0.46	-0.6
2,390,418	+		AO353_10950	0.46	-0.1
2,390,418	+		AO353_10950	0.46	+0.6
2,390,418	+		AO353_10950	0.46	-0.3
2,390,418	+		AO353_10950	0.46	-2.0
2,390,418	+		AO353_10950	0.46	-1.2
2,390,418	+		AO353_10950	0.46	+0.4
2,390,419	-		AO353_10950	0.46	-0.7
2,390,419	-		AO353_10950	0.46	+1.2
2,390,419	-		AO353_10950	0.46	+1.9
2,390,419	-		AO353_10950	0.46	+0.2
2,390,419	-		AO353_10950	0.46	+0.2
2,390,419	-		AO353_10950	0.46	+1.5
2,390,419	-		AO353_10950	0.46	-0.9
2,390,419	-		AO353_10950	0.46	+0.3
2,390,419	-		AO353_10950	0.46	+0.4
2,390,419	-		AO353_10950	0.46	-0.2
2,390,419	-		AO353_10950	0.46	+0.2
2,390,419	-		AO353_10950	0.46	+1.2
2,390,419	-		AO353_10950	0.46	-0.4
2,390,419	-		AO353_10950	0.46	-0.7
2,390,419	-		AO353_10950	0.46	-0.2
2,390,419	-		AO353_10950	0.46	+0.5
2,390,419	-		AO353_10950	0.46	-1.0
2,390,460	-		AO353_10950	0.53	-1.1
2,390,568	+		AO353_10950	0.70	+0.2
2,390,568	+		AO353_10950	0.70	-1.5
2,390,568	+		AO353_10950	0.70	-1.4
2,390,568	+		AO353_10950	0.70	-0.6
2,390,568	+		AO353_10950	0.70	+1.4
2,390,568	+		AO353_10950	0.70	+0.7
2,390,568	+		AO353_10950	0.70	+0.4
2,390,568	+		AO353_10950	0.70	+0.6
2,390,568	+		AO353_10950	0.70	+0.0
2,390,569	-		AO353_10950	0.70	+0.4
2,390,569	-		AO353_10950	0.70	+0.6
2,390,569	-		AO353_10950	0.70	+1.2
2,390,569	-		AO353_10950	0.70	-0.7
2,390,569	-		AO353_10950	0.70	-0.5
2,390,569	-		AO353_10950	0.70	-0.6
2,390,667	+		AO353_10950	0.86	-1.0
2,390,668	-		AO353_10950	0.86	+0.6
2,390,729	-				-1.1
2,390,750	+				+0.1
2,390,750	+				+0.0
2,390,751	-				-1.2
2,390,754	+				-1.6
2,390,754	+				+0.3
2,390,754	+				-0.1
2,390,754	+				-0.1
2,390,754	+				-0.4
2,390,755	-				-0.6
2,390,755	-				+0.8
2,390,755	-				+0.1
2,390,755	-				-0.9
2,390,755	-				+0.3
2,390,755	-				-1.0
2,390,922	+		AO353_10955	0.17	-1.4
2,390,922	+		AO353_10955	0.17	+0.2
2,390,923	-		AO353_10955	0.18	-0.6
2,390,923	-		AO353_10955	0.18	-0.0