Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22300

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,361,985	+		ABZR87_RS22295	0.49	-0.8
1,361,985	+		ABZR87_RS22295	0.49	+1.8
1,361,985	+		ABZR87_RS22295	0.49	+1.4
1,361,985	+		ABZR87_RS22295	0.49	+0.5
1,361,985	+		ABZR87_RS22295	0.49	-0.0
1,361,985	+		ABZR87_RS22295	0.49	+0.8
1,361,985	+		ABZR87_RS22295	0.49	+0.3
1,361,985	+		ABZR87_RS22295	0.49	+1.5
1,361,985	+		ABZR87_RS22295	0.49	+2.8
1,361,985	+		ABZR87_RS22295	0.49	+0.9
1,361,985	+		ABZR87_RS22295	0.49	+0.9
1,361,985	+		ABZR87_RS22295	0.49	+1.5
1,361,985	+		ABZR87_RS22295	0.49	+2.4
1,361,986	-		ABZR87_RS22295	0.49	+0.3
1,361,986	-		ABZR87_RS22295	0.49	+1.9
1,361,986	-		ABZR87_RS22295	0.49	+2.0
1,361,986	-		ABZR87_RS22295	0.49	+0.2
1,361,986	-		ABZR87_RS22295	0.49	+1.0
1,361,986	-		ABZR87_RS22295	0.49	+3.2
1,361,986	-		ABZR87_RS22295	0.49	+0.3
1,361,986	-		ABZR87_RS22295	0.49	+1.7
1,361,986	-		ABZR87_RS22295	0.49	+3.9
1,361,986	-		ABZR87_RS22295	0.49	-0.4
1,361,986	-		ABZR87_RS22295	0.49	+2.3
1,361,986	-		ABZR87_RS22295	0.49	+2.2
1,361,986	-		ABZR87_RS22295	0.49	+3.5
1,361,986	-		ABZR87_RS22295	0.49	+3.8
1,361,986	-		ABZR87_RS22295	0.49	+4.3
1,361,986	-		ABZR87_RS22295	0.49	-0.8
1,361,986	-		ABZR87_RS22295	0.49	+1.1
1,362,062	+		ABZR87_RS22295	0.58	+0.9
1,362,062	+		ABZR87_RS22295	0.58	+0.1
1,362,062	+		ABZR87_RS22295	0.58	+0.9
1,362,062	+		ABZR87_RS22295	0.58	+1.6
1,362,062	+		ABZR87_RS22295	0.58	+1.0
1,362,062	+		ABZR87_RS22295	0.58	-0.3
1,362,062	+		ABZR87_RS22295	0.58	+0.1
1,362,062	+		ABZR87_RS22295	0.58	+7.5
1,362,062	+		ABZR87_RS22295	0.58	+2.7
1,362,062	+		ABZR87_RS22295	0.58	+1.5
1,362,062	+		ABZR87_RS22295	0.58	+1.1
1,362,063	-		ABZR87_RS22295	0.58	+0.8
1,362,063	-		ABZR87_RS22295	0.58	-1.1
1,362,063	-		ABZR87_RS22295	0.58	+1.6
1,362,063	-		ABZR87_RS22295	0.58	+0.7
1,362,063	-		ABZR87_RS22295	0.58	+0.0
1,362,063	-		ABZR87_RS22295	0.58	+2.7
1,362,063	-		ABZR87_RS22295	0.58	+1.6
1,362,063	-		ABZR87_RS22295	0.58	+1.5
1,362,063	-		ABZR87_RS22295	0.58	+1.0
1,362,063	-		ABZR87_RS22295	0.58	+1.4
1,362,065	+		ABZR87_RS22295	0.58	+0.3
1,362,065	+		ABZR87_RS22295	0.58	+2.4
1,362,065	+		ABZR87_RS22295	0.58	+1.4
1,362,065	+		ABZR87_RS22295	0.58	+0.7
1,362,065	+		ABZR87_RS22295	0.58	-0.9
1,362,065	+		ABZR87_RS22295	0.58	+1.4
1,362,065	+		ABZR87_RS22295	0.58	+0.7
1,362,065	+		ABZR87_RS22295	0.58	+0.6
1,362,065	+		ABZR87_RS22295	0.58	-1.1
1,362,066	-		ABZR87_RS22295	0.58	+0.6
1,362,066	-		ABZR87_RS22295	0.58	+0.8
1,362,066	-		ABZR87_RS22295	0.58	+1.2
1,362,066	-		ABZR87_RS22295	0.58	+2.3
1,362,066	-		ABZR87_RS22295	0.58	+1.3
1,362,066	-		ABZR87_RS22295	0.58	-1.0
1,362,066	-		ABZR87_RS22295	0.58	+2.2
1,362,066	-		ABZR87_RS22295	0.58	+8.2
1,362,066	-		ABZR87_RS22295	0.58	+1.9
1,362,066	-		ABZR87_RS22295	0.58	+8.2
1,362,066	-		ABZR87_RS22295	0.58	+1.2
1,362,066	-		ABZR87_RS22295	0.58	+1.2
1,362,066	-		ABZR87_RS22295	0.58	+0.4
1,362,107	-		ABZR87_RS22295	0.63	+0.4
1,362,192	+		ABZR87_RS22295	0.72	+1.5
1,362,192	+		ABZR87_RS22295	0.72	+1.6
1,362,192	+		ABZR87_RS22295	0.72	+0.7
1,362,193	-		ABZR87_RS22295	0.73	+1.3
1,362,193	-		ABZR87_RS22295	0.73	+1.3
1,362,193	-		ABZR87_RS22295	0.73	-0.4
1,362,193	-		ABZR87_RS22295	0.73	+4.3
1,362,193	-		ABZR87_RS22295	0.73	+0.6
1,362,432	-				+0.1
1,362,432	-				-0.2
1,362,432	-				+0.5
1,362,464	+				+0.3
1,362,464	+				-1.0
1,362,483	+				+0.6
1,362,484	-				-0.2
1,362,484	-				-0.2
1,362,484	-				+0.1
1,362,493	+				+0.1
1,362,527	+				-0.5
1,362,527	+				-0.2
1,362,527	+				-0.7
1,362,527	+				+0.7
1,362,527	+				+0.1
1,362,527	+				-0.1
1,362,528	-				+5.7
1,362,528	-				+5.2
1,362,528	-				+1.5
1,362,528	-				+1.7
1,362,570	+				+4.8
1,362,570	+				+6.8
1,362,570	+				+5.4
1,362,570	+				+6.4
1,362,571	-				+5.0
1,362,571	-				+7.9
1,362,571	-				+7.1
1,362,571	-				+8.3
1,362,571	-				+6.6
1,362,582	+				+1.8
1,362,582	+				+4.6
1,362,583	-				+7.4
1,362,583	-				+5.4
1,362,583	-				+6.3
1,362,583	-				+6.4
1,362,583	-				+8.1
1,362,654	+		ABZR87_RS22300	0.31	+2.1
1,362,905	-				+0.8
1,362,905	-				+1.4
1,362,996	+				+0.7
1,362,996	+				-0.2
1,362,996	+				+4.4
1,362,996	+				-1.5
1,362,996	+				-0.4
1,362,996	+				+0.2
1,362,996	+				-0.4
1,362,996	+				-0.3
1,362,996	+				+1.4
1,362,996	+				-1.1
1,362,997	-				+0.6
1,362,997	-				-0.3
1,362,997	-				+1.4
1,363,235	+		ABZR87_RS22305	0.50	+6.8
1,363,235	+		ABZR87_RS22305	0.50	+1.2
1,363,235	+		ABZR87_RS22305	0.50	+3.2
1,363,235	+		ABZR87_RS22305	0.50	+5.3
1,363,235	+		ABZR87_RS22305	0.50	+1.5
1,363,236	-		ABZR87_RS22305	0.50	-0.8
1,363,236	-		ABZR87_RS22305	0.50	+2.3
1,363,236	-		ABZR87_RS22305	0.50	+3.5
1,363,236	-		ABZR87_RS22305	0.50	+6.5
1,363,236	-		ABZR87_RS22305	0.50	+0.5
1,363,407	-		ABZR87_RS22305	0.87	+2.1
1,363,407	-		ABZR87_RS22305	0.87	+4.4
1,363,463	+				-0.2
1,363,463	+				-1.8
1,363,463	+				-0.0
1,363,463	+				-1.4
1,363,463	+				+0.6
1,363,463	+				-0.9
1,363,464	-				+1.1
1,363,464	-				-0.1
1,363,464	-				-1.9
1,363,464	-				-2.0
1,363,464	-				+0.3
1,363,506	-				+1.3
1,363,506	-				-1.9
1,363,536	+				+2.2
1,363,536	+				+1.3
1,363,537	-				-0.3
1,363,537	-				-2.3
1,363,559	+				+0.3
1,363,559	+				+1.9
1,363,559	+				-0.0
1,363,559	+				-1.9
1,363,559	+				+0.3
1,363,559	+				+0.7
1,363,559	+				+0.5
1,363,559	+				+1.5
1,363,559	+				+2.0
1,363,559	+				+1.4
1,363,559	+				+0.1
1,363,559	+				-0.1
1,363,559	+				-2.2
1,363,560	-				-0.7
1,363,560	-				-2.5
1,363,560	-				-2.3
1,363,560	-				-0.1
1,363,560	-				+0.6
1,363,560	-				-1.9
1,363,560	-				-2.3
1,363,560	-				-0.3
1,363,560	-				+1.1
1,363,560	-				-0.6
1,363,560	-				+0.7
1,363,560	-				+1.5
1,363,560	-				-0.1
1,363,563	+				+0.1
1,363,563	+				-1.3
1,363,563	+				+0.8
1,363,563	+				+0.4
1,363,563	+				+1.1
1,363,563	+				-0.0
1,363,563	+				-1.3
1,363,563	+				-0.6
1,363,564	-				-1.6
1,363,564	-				+1.5
1,363,564	-				-1.1
1,363,564	-				+1.8
1,363,564	-				-2.2
1,363,564	-				+0.5
1,363,564	-				+0.9
1,363,564	-				-0.4
1,363,564	-				+1.8
1,363,564	-				+1.3
1,363,564	-				+0.3
1,363,564	-				-0.4
1,363,564	-				-1.4
1,363,564	-				+0.3
1,363,564	-				-0.4
1,363,566	-				+0.9
1,363,648	+				+1.1
1,363,648	+				+0.5
1,363,648	+				-0.7
1,363,648	+				-0.9
1,363,648	+				+0.2
1,363,648	+				+1.7
1,363,649	-				-0.9
1,363,649	-				-1.5
1,363,670	+				-0.3
1,363,671	-				-0.1
1,363,671	-				-1.8
1,363,671	-				-1.6
1,363,671	-				+0.6
1,363,692	+				+0.2
1,363,692	+				-0.6
1,363,692	+				+0.0
1,363,692	+				+0.5
1,363,692	+				+0.9
1,363,692	+				-1.2
1,363,693	-				-0.7
1,363,693	-				-0.5
1,363,693	-				+0.2
1,363,693	-				-0.5
1,363,759	+				-0.6
1,363,759	+				+0.1
1,363,759	+				-0.4
1,363,760	-				+1.1
1,363,760	-				+0.7
1,363,760	-				-1.0
1,363,790	+				-0.3
1,363,790	+				+0.6
1,363,790	+				+0.2
1,363,790	+				-0.0
1,363,790	+				+0.7
1,363,790	+				+0.8
1,363,790	+				+0.0
1,363,790	+				+0.5
1,363,791	-				+1.7
1,363,791	-				+0.3
1,363,791	-				-0.4
1,363,791	-				+0.1
1,363,791	-				+2.0
1,363,791	-				-2.7
1,363,791	-				-0.7
1,363,791	-				+2.7
1,363,793	-				-2.7
1,363,793	-				-0.3
1,363,860	+				-0.1
1,363,860	+				+0.4
1,363,860	+				+0.4
1,363,860	+				-0.5
1,363,861	-				+0.3
1,363,861	-				-1.1
1,363,861	-				-1.4