Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13550

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
2,871,518	+		ABZR87_RS13545	0.73	-0.3
2,871,518	+		ABZR87_RS13545	0.73	+1.2
2,871,518	+		ABZR87_RS13545	0.73	-0.3
2,871,519	-		ABZR87_RS13545	0.73	-0.3
2,871,561	-		ABZR87_RS13545	0.76	+1.0
2,871,561	-		ABZR87_RS13545	0.76	-0.9
2,871,561	-		ABZR87_RS13545	0.76	-0.2
2,871,561	-		ABZR87_RS13545	0.76	-0.8
2,871,617	+		ABZR87_RS13545	0.80	-0.3
2,871,618	-		ABZR87_RS13545	0.80	+0.8
2,871,623	+		ABZR87_RS13545	0.81	+0.5
2,871,624	-		ABZR87_RS13545	0.81	+0.5
2,871,624	-		ABZR87_RS13545	0.81	-0.6
2,871,624	-		ABZR87_RS13545	0.81	-1.2
2,871,624	-		ABZR87_RS13545	0.81	-0.8
2,871,624	-		ABZR87_RS13545	0.81	-1.4
2,871,624	-		ABZR87_RS13545	0.81	-0.1
2,871,627	+		ABZR87_RS13545	0.81	+0.1
2,871,627	+		ABZR87_RS13545	0.81	-1.1
2,871,628	-		ABZR87_RS13545	0.81	+0.2
2,871,628	-		ABZR87_RS13545	0.81	+0.7
2,871,628	-		ABZR87_RS13545	0.81	+0.5
2,871,628	-		ABZR87_RS13545	0.81	+3.0
2,871,628	-		ABZR87_RS13545	0.81	-1.5
2,871,628	-		ABZR87_RS13545	0.81	-0.0
2,871,628	-		ABZR87_RS13545	0.81	-0.2
2,871,628	-		ABZR87_RS13545	0.81	+1.3
2,871,629	+		ABZR87_RS13545	0.81	+0.5
2,871,629	+		ABZR87_RS13545	0.81	+2.3
2,871,629	+		ABZR87_RS13545	0.81	+0.5
2,871,629	+		ABZR87_RS13545	0.81	+0.9
2,871,629	+		ABZR87_RS13545	0.81	+1.1
2,871,629	+		ABZR87_RS13545	0.81	+0.2
2,871,630	-		ABZR87_RS13545	0.81	-0.8
2,871,630	-		ABZR87_RS13545	0.81	-0.3
2,871,630	-		ABZR87_RS13545	0.81	-1.1
2,871,630	-		ABZR87_RS13545	0.81	+0.3
2,871,630	-		ABZR87_RS13545	0.81	+0.8
2,871,630	-		ABZR87_RS13545	0.81	+0.4
2,871,630	-		ABZR87_RS13545	0.81	+0.6
2,871,630	-		ABZR87_RS13545	0.81	+1.8
2,871,630	-		ABZR87_RS13545	0.81	+0.3
2,871,630	-		ABZR87_RS13545	0.81	-0.8
2,871,630	-		ABZR87_RS13545	0.81	+0.4
2,871,671	+		ABZR87_RS13545	0.84	-0.1
2,871,671	+		ABZR87_RS13545	0.84	+1.8
2,871,901	+				-0.0
2,871,901	+				+0.9
2,871,901	+				+0.4
2,871,902	-				+0.3
2,871,978	-				+1.8
2,872,025	-				-0.5
2,872,049	+				-0.1
2,872,092	+				-0.2
2,872,093	-				-0.0
2,872,106	+				-0.1
2,872,107	-				+0.2
2,872,169	+				-0.8
2,872,169	+				+2.8
2,872,169	+				+0.7
2,872,169	+				-0.2
2,872,169	+				+0.1
2,872,169	+				-0.2
2,872,170	-				+1.4
2,872,170	-				+0.5
2,872,170	-				+6.8
2,872,170	-				-1.1
2,872,170	-				-0.6
2,872,170	-				+0.1
2,872,170	-				+1.1
2,872,326	+		ABZR87_RS13550	0.21	-1.2
2,872,327	-		ABZR87_RS13550	0.21	+1.6
2,872,327	-		ABZR87_RS13550	0.21	-0.8
2,872,433	+		ABZR87_RS13550	0.31	-0.6
2,872,433	+		ABZR87_RS13550	0.31	-0.1
2,872,433	+		ABZR87_RS13550	0.31	-0.3
2,872,433	+		ABZR87_RS13550	0.31	+0.7
2,872,434	-		ABZR87_RS13550	0.31	+0.2
2,872,434	-		ABZR87_RS13550	0.31	-0.3
2,872,434	-		ABZR87_RS13550	0.31	-1.2
2,872,770	+		ABZR87_RS13550	0.62	-1.3
2,872,770	+		ABZR87_RS13550	0.62	-0.5
2,872,770	+		ABZR87_RS13550	0.62	+0.4
2,872,770	+		ABZR87_RS13550	0.62	-0.1
2,872,770	+		ABZR87_RS13550	0.62	-1.9
2,872,770	+		ABZR87_RS13550	0.62	-0.4
2,872,770	+		ABZR87_RS13550	0.62	-0.4
2,872,770	+		ABZR87_RS13550	0.62	+0.8
2,872,770	+		ABZR87_RS13550	0.62	+0.1
2,872,771	-		ABZR87_RS13550	0.62	+0.2
2,872,771	-		ABZR87_RS13550	0.62	-0.8
2,872,771	-		ABZR87_RS13550	0.62	+2.1
2,872,771	-		ABZR87_RS13550	0.62	+0.6
2,872,771	-		ABZR87_RS13550	0.62	+1.1
2,872,773	+		ABZR87_RS13550	0.62	+0.4
2,872,773	+		ABZR87_RS13550	0.62	-1.0
2,872,773	+		ABZR87_RS13550	0.62	-0.6
2,872,774	-		ABZR87_RS13550	0.62	+0.7
2,872,774	-		ABZR87_RS13550	0.62	-0.3
2,872,774	-		ABZR87_RS13550	0.62	+0.4
2,872,862	+		ABZR87_RS13550	0.70	+1.8
2,872,862	+		ABZR87_RS13550	0.70	+0.1
2,872,863	-		ABZR87_RS13550	0.71	+1.9
2,872,863	-		ABZR87_RS13550	0.71	+3.0
2,872,863	-		ABZR87_RS13550	0.71	+0.8
2,872,863	-		ABZR87_RS13550	0.71	+0.8
2,872,901	+		ABZR87_RS13550	0.74	+2.7
2,872,901	+		ABZR87_RS13550	0.74	+1.0
2,872,902	-		ABZR87_RS13550	0.74	+0.3
2,872,902	-		ABZR87_RS13550	0.74	+1.0
2,872,902	-		ABZR87_RS13550	0.74	+0.0
2,872,902	-		ABZR87_RS13550	0.74	-0.3
2,872,902	-		ABZR87_RS13550	0.74	-1.5
2,872,910	+		ABZR87_RS13550	0.75	+0.3
2,872,910	+		ABZR87_RS13550	0.75	-0.3
2,872,910	+		ABZR87_RS13550	0.75	-1.1
2,872,910	+		ABZR87_RS13550	0.75	-0.7
2,872,910	+		ABZR87_RS13550	0.75	-0.2
2,872,910	+		ABZR87_RS13550	0.75	-0.1
2,872,910	+		ABZR87_RS13550	0.75	+0.6
2,872,910	+		ABZR87_RS13550	0.75	+0.2
2,872,910	+		ABZR87_RS13550	0.75	-0.5
2,872,910	+		ABZR87_RS13550	0.75	-2.3
2,872,910	+		ABZR87_RS13550	0.75	+0.8
2,872,911	-		ABZR87_RS13550	0.75	-1.3
2,872,911	-		ABZR87_RS13550	0.75	+0.5
2,872,911	-		ABZR87_RS13550	0.75	-0.2
2,872,911	-		ABZR87_RS13550	0.75	-1.4
2,872,911	-		ABZR87_RS13550	0.75	+1.2
2,872,911	-		ABZR87_RS13550	0.75	+1.1
2,872,911	-		ABZR87_RS13550	0.75	+0.3
2,872,944	-		ABZR87_RS13550	0.78	+0.3
2,873,042	+		ABZR87_RS13550	0.87	-0.1
2,873,043	-		ABZR87_RS13550	0.87	-0.6
2,873,043	-		ABZR87_RS13550	0.87	+0.4
2,873,142	-				+0.8
2,873,142	-				-0.1
2,873,251	+				+0.4
2,873,251	+				+0.5
2,873,361	-				-0.2
2,873,509	+		ABZR87_RS13555	0.42	+1.4
2,873,509	+		ABZR87_RS13555	0.42	-0.8
2,873,510	-		ABZR87_RS13555	0.43	+0.4
2,873,639	+		ABZR87_RS13555	0.77	-0.8
2,873,639	+		ABZR87_RS13555	0.77	-1.9
2,873,640	-		ABZR87_RS13555	0.77	+0.3
2,873,738	+				+0.9
2,873,738	+				-1.1
2,873,739	-				-3.5
2,873,749	+				+0.2
2,873,750	-				-0.4
2,873,750	-				+0.8
2,873,781	+				+0.5
2,873,781	+				+0.0
2,873,786	+				+1.3
2,873,786	+				+0.9
2,873,786	+				-0.1
2,873,787	-				-1.4
2,873,787	-				-0.9
2,873,787	-				+1.4
2,873,821	-				-1.2
2,873,831	+				-0.5
2,873,832	-				-0.7
2,873,832	-				-0.2
2,873,832	-				-0.4
2,873,937	+		ABZR87_RS13560	0.78	+1.2
2,873,937	+		ABZR87_RS13560	0.78	+0.1
2,873,937	+		ABZR87_RS13560	0.78	-1.0
2,873,937	+		ABZR87_RS13560	0.78	+1.0
2,873,938	-		ABZR87_RS13560	0.78	-0.3
2,873,938	-		ABZR87_RS13560	0.78	+0.1
2,873,938	-		ABZR87_RS13560	0.78	-0.2
2,873,938	-		ABZR87_RS13560	0.78	+0.7
2,873,938	-		ABZR87_RS13560	0.78	-0.3
2,874,000	+				-0.3
2,874,000	+				-1.0
2,874,000	+				+0.4
2,874,001	-				+0.4
2,874,001	-				+0.5
2,874,003	+				-1.6
2,874,003	+				-1.0
2,874,003	+				-0.8
2,874,041	-				+2.8
2,874,041	-				-0.1
2,874,041	-				-1.3
2,874,041	-				+1.0