Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05870

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,251,797	+		ABZR87_RS05865	0.48	+0.6
1,251,798	-		ABZR87_RS05865	0.48	+0.5
1,251,832	+		ABZR87_RS05865	0.50	-2.6
1,251,832	+		ABZR87_RS05865	0.50	+0.6
1,251,833	-		ABZR87_RS05865	0.50	-1.2
1,251,835	+		ABZR87_RS05865	0.50	-0.2
1,251,836	-		ABZR87_RS05865	0.50	-0.3
1,251,836	-		ABZR87_RS05865	0.50	-0.7
1,251,892	+		ABZR87_RS05865	0.54	+1.4
1,251,892	+		ABZR87_RS05865	0.54	+0.9
1,251,892	+		ABZR87_RS05865	0.54	-0.1
1,251,892	+		ABZR87_RS05865	0.54	+1.1
1,251,892	+		ABZR87_RS05865	0.54	-0.4
1,251,892	+		ABZR87_RS05865	0.54	+0.3
1,251,892	+		ABZR87_RS05865	0.54	-0.6
1,251,893	-		ABZR87_RS05865	0.54	+0.7
1,252,084	+		ABZR87_RS05865	0.68	-0.9
1,252,084	+		ABZR87_RS05865	0.68	-0.1
1,252,084	+		ABZR87_RS05865	0.68	-2.1
1,252,084	+		ABZR87_RS05865	0.68	-0.0
1,252,085	-		ABZR87_RS05865	0.68	-0.4
1,252,085	-		ABZR87_RS05865	0.68	-0.1
1,252,085	-		ABZR87_RS05865	0.68	+1.1
1,252,085	-		ABZR87_RS05865	0.68	-1.1
1,252,085	-		ABZR87_RS05865	0.68	-0.5
1,252,085	-		ABZR87_RS05865	0.68	-1.1
1,252,085	-		ABZR87_RS05865	0.68	-0.1
1,252,085	-		ABZR87_RS05865	0.68	-0.9
1,252,127	+		ABZR87_RS05865	0.71	+1.4
1,252,127	+		ABZR87_RS05865	0.71	+0.7
1,252,137	+		ABZR87_RS05865	0.72	-1.0
1,252,137	+		ABZR87_RS05865	0.72	+0.2
1,252,138	-		ABZR87_RS05865	0.72	+0.0
1,252,138	-		ABZR87_RS05865	0.72	-1.1
1,252,138	-		ABZR87_RS05865	0.72	+1.4
1,252,138	-		ABZR87_RS05865	0.72	+0.2
1,252,264	-		ABZR87_RS05865	0.81	+0.1
1,252,268	+		ABZR87_RS05865	0.81	+0.0
1,252,268	+		ABZR87_RS05865	0.81	-1.2
1,252,300	+		ABZR87_RS05865	0.83	-0.7
1,252,300	+		ABZR87_RS05865	0.83	+0.8
1,252,300	+		ABZR87_RS05865	0.83	+0.8
1,252,300	+		ABZR87_RS05865	0.83	-1.5
1,252,300	+		ABZR87_RS05865	0.83	+1.3
1,252,300	+		ABZR87_RS05865	0.83	-2.1
1,252,300	+		ABZR87_RS05865	0.83	-0.2
1,252,301	-		ABZR87_RS05865	0.83	+0.3
1,252,301	-		ABZR87_RS05865	0.83	-1.1
1,252,301	-		ABZR87_RS05865	0.83	-1.9
1,252,301	-		ABZR87_RS05865	0.83	+0.6
1,252,301	-		ABZR87_RS05865	0.83	+0.5
1,252,349	+		ABZR87_RS05865	0.87	-0.3
1,252,351	+		ABZR87_RS05865	0.87	+0.5
1,252,351	+		ABZR87_RS05865	0.87	+1.0
1,252,351	+		ABZR87_RS05865	0.87	+0.1
1,252,351	+		ABZR87_RS05865	0.87	+0.2
1,252,351	+		ABZR87_RS05865	0.87	+0.6
1,252,351	+		ABZR87_RS05865	0.87	+1.0
1,252,352	-		ABZR87_RS05865	0.87	-0.6
1,252,352	-		ABZR87_RS05865	0.87	+0.1
1,252,407	+				-1.5
1,252,408	-				-2.3
1,252,408	-				-0.4
1,252,412	+				+0.7
1,252,412	+				+0.7
1,252,412	+				-0.1
1,252,412	+				-0.2
1,252,413	-				+0.5
1,252,413	-				+0.1
1,252,413	-				-0.3
1,252,413	-				+0.5
1,252,413	-				-1.0
1,252,447	+				-0.7
1,252,447	+				+1.2
1,252,447	+				-0.2
1,252,447	+				+0.5
1,252,447	+				-1.2
1,252,447	+				+1.6
1,252,447	+				-0.6
1,252,447	+				+0.5
1,252,447	+				-0.1
1,252,448	-				-1.1
1,252,448	-				+0.3
1,252,448	-				-0.1
1,252,448	-				+0.1
1,252,448	-				-0.8
1,252,528	+				+0.5
1,252,528	+				-0.8
1,252,528	+				+0.4
1,252,528	+				-2.0
1,252,528	+				+0.1
1,252,528	+				+0.3
1,252,528	+				-0.0
1,252,528	+				+1.8
1,252,529	-				-0.7
1,252,529	-				-0.9
1,252,529	-				+0.8
1,252,529	-				-2.0
1,252,529	-				+0.2
1,252,529	-				+0.5
1,252,529	-				+2.7
1,252,529	-				+0.1
1,252,529	-				+0.9
1,252,529	-				-1.0
1,252,529	-				-1.0
1,252,535	+				-1.5
1,252,535	+				+0.0
1,252,536	-				-0.1
1,252,572	-				-1.2
1,252,594	+				+0.3
1,252,594	+				+0.9
1,252,594	+				+0.6
1,252,595	-				-1.2
1,252,595	-				-1.1
1,252,762	+				+0.5
1,252,770	+				+0.0
1,252,770	+				+0.8
1,252,770	+				+0.7
1,252,770	+				-0.4
1,252,770	+				-2.5
1,252,770	+				-0.8
1,252,770	+				-0.4
1,252,770	+				-0.1
1,252,770	+				-0.1
1,252,770	+				+1.1
1,252,770	+				+0.2
1,252,770	+				+0.9
1,252,770	+				+1.6
1,252,770	+				+0.3
1,252,770	+				+1.7
1,252,771	-				+1.1
1,252,771	-				-1.5
1,252,771	-				-0.5
1,252,771	-				-0.2
1,252,771	-				-0.0
1,252,771	-				+0.2
1,252,771	-				+0.6
1,252,771	-				+0.2
1,252,771	-				-0.7
1,252,771	-				-1.0
1,252,771	-				+0.8
1,252,870	+		ABZR87_RS05870	0.12	+0.3
1,252,871	-		ABZR87_RS05870	0.12	-1.0
1,252,871	-		ABZR87_RS05870	0.12	+0.5
1,252,895	-		ABZR87_RS05870	0.14	-0.1
1,253,129	-		ABZR87_RS05870	0.32	+0.2
1,253,129	-		ABZR87_RS05870	0.32	+0.2
1,253,158	+		ABZR87_RS05870	0.34	-0.2
1,253,170	+		ABZR87_RS05870	0.35	-0.4
1,253,170	+		ABZR87_RS05870	0.35	-0.1
1,253,170	+		ABZR87_RS05870	0.35	-0.0
1,253,239	+		ABZR87_RS05870	0.40	+0.6
1,253,239	+		ABZR87_RS05870	0.40	+4.5
1,253,239	+		ABZR87_RS05870	0.40	-1.1
1,253,239	+		ABZR87_RS05870	0.40	+0.4
1,253,239	+		ABZR87_RS05870	0.40	-0.3
1,253,239	+		ABZR87_RS05870	0.40	-1.6
1,253,239	+		ABZR87_RS05870	0.40	-0.2
1,253,239	+		ABZR87_RS05870	0.40	-1.2
1,253,240	-		ABZR87_RS05870	0.40	+0.4
1,253,240	-		ABZR87_RS05870	0.40	-0.3
1,253,240	-		ABZR87_RS05870	0.40	-0.5
1,253,240	-		ABZR87_RS05870	0.40	-1.2
1,253,240	-		ABZR87_RS05870	0.40	-0.5
1,253,240	-		ABZR87_RS05870	0.40	-0.8
1,253,240	-		ABZR87_RS05870	0.40	+0.2
1,253,240	-		ABZR87_RS05870	0.40	-3.0
1,253,240	-		ABZR87_RS05870	0.40	+0.1
1,253,240	-		ABZR87_RS05870	0.40	+0.3
1,253,318	+		ABZR87_RS05870	0.46	-0.6
1,253,318	+		ABZR87_RS05870	0.46	+0.1
1,253,318	+		ABZR87_RS05870	0.46	+2.2
1,253,318	+		ABZR87_RS05870	0.46	-1.6
1,253,318	+		ABZR87_RS05870	0.46	-0.9
1,253,318	+		ABZR87_RS05870	0.46	-1.6
1,253,319	-		ABZR87_RS05870	0.46	-0.3
1,253,319	-		ABZR87_RS05870	0.46	-0.0
1,253,319	-		ABZR87_RS05870	0.46	-1.7
1,253,319	-		ABZR87_RS05870	0.46	+1.1
1,253,319	-		ABZR87_RS05870	0.46	-0.3
1,253,319	-		ABZR87_RS05870	0.46	+0.3
1,253,334	+		ABZR87_RS05870	0.47	+0.5
1,253,484	+		ABZR87_RS05870	0.58	-0.5
1,253,484	+		ABZR87_RS05870	0.58	-0.0
1,253,484	+		ABZR87_RS05870	0.58	-0.0
1,253,484	+		ABZR87_RS05870	0.58	-0.0
1,253,485	-		ABZR87_RS05870	0.59	-0.5
1,253,485	-		ABZR87_RS05870	0.59	+0.5
1,253,485	-		ABZR87_RS05870	0.59	-0.2
1,253,485	-		ABZR87_RS05870	0.59	+0.3
1,253,500	+		ABZR87_RS05870	0.60	+0.8
1,253,501	-		ABZR87_RS05870	0.60	-0.1
1,253,599	+		ABZR87_RS05870	0.67	-0.7
1,253,599	+		ABZR87_RS05870	0.67	+0.3
1,253,599	+		ABZR87_RS05870	0.67	+2.8
1,253,599	+		ABZR87_RS05870	0.67	-1.9
1,253,599	+		ABZR87_RS05870	0.67	-0.3
1,253,600	-		ABZR87_RS05870	0.67	+0.1
1,253,600	-		ABZR87_RS05870	0.67	-0.4
1,253,600	-		ABZR87_RS05870	0.67	-2.4
1,253,600	-		ABZR87_RS05870	0.67	-0.2
1,253,600	-		ABZR87_RS05870	0.67	+0.8
1,253,600	-		ABZR87_RS05870	0.67	-0.4
1,253,600	-		ABZR87_RS05870	0.67	-0.8
1,253,731	+		ABZR87_RS05870	0.77	-0.5
1,253,731	+		ABZR87_RS05870	0.77	+0.3
1,253,731	+		ABZR87_RS05870	0.77	+2.4
1,253,731	+		ABZR87_RS05870	0.77	-0.3
1,253,731	+		ABZR87_RS05870	0.77	+0.3
1,253,732	-		ABZR87_RS05870	0.77	-1.3
1,253,732	-		ABZR87_RS05870	0.77	-0.8
1,253,732	-		ABZR87_RS05870	0.77	+0.8
1,253,732	-		ABZR87_RS05870	0.77	-1.1
1,253,732	-		ABZR87_RS05870	0.77	-1.7
1,253,732	-		ABZR87_RS05870	0.77	+0.3
1,253,827	-		ABZR87_RS05870	0.84	-0.3
1,253,916	+				+0.0
1,253,916	+				-0.9
1,253,916	+				+0.2
1,253,916	+				+0.8
1,253,916	+				+0.1
1,253,916	+				+0.5
1,253,916	+				+1.6
1,253,916	+				-0.8
1,253,916	+				+0.3
1,253,916	+				-0.4
1,253,916	+				+0.8
1,253,917	-				+0.5
1,253,917	-				-0.3
1,253,917	-				+0.2
1,253,917	-				-0.3
1,253,917	-				+3.6
1,253,931	+				-2.0
1,253,939	-				-0.1
1,253,939	-				-0.9
1,253,939	-				-0.6
1,254,013	+				-0.5
1,254,013	+				+2.5
1,254,014	-				-0.6
1,254,016	-				-0.5
1,254,016	-				-0.2
1,254,016	-				+0.0
1,254,016	-				+0.9
1,254,079	+				-0.6
1,254,079	+				-0.2
1,254,079	+				+2.9
1,254,079	+				+0.6
1,254,079	+				+1.2
1,254,079	+				-0.8
1,254,080	-				+0.5
1,254,080	-				-0.5
1,254,095	+				-1.4
1,254,096	-				-1.6
1,254,096	-				+0.2
1,254,096	-				+1.2
1,254,096	-				-2.4
1,254,179	+		ABZR87_RS05875	0.11	+3.0
1,254,236	+		ABZR87_RS05875	0.17	-0.2
1,254,324	+		ABZR87_RS05875	0.27	-0.0
1,254,324	+		ABZR87_RS05875	0.27	+0.1
1,254,324	+		ABZR87_RS05875	0.27	+1.1
1,254,324	+		ABZR87_RS05875	0.27	+0.3
1,254,324	+		ABZR87_RS05875	0.27	-0.3
1,254,324	+		ABZR87_RS05875	0.27	+3.8
1,254,324	+		ABZR87_RS05875	0.27	-0.6
1,254,324	+		ABZR87_RS05875	0.27	+0.1
1,254,325	-		ABZR87_RS05875	0.27	-0.9
1,254,325	-		ABZR87_RS05875	0.27	+0.8
1,254,325	-		ABZR87_RS05875	0.27	-0.9
1,254,325	-		ABZR87_RS05875	0.27	-2.5
1,254,325	-		ABZR87_RS05875	0.27	+0.5
1,254,325	-		ABZR87_RS05875	0.27	-0.4
1,254,325	-		ABZR87_RS05875	0.27	+0.4
1,254,325	-		ABZR87_RS05875	0.27	-0.4
1,254,325	-		ABZR87_RS05875	0.27	-0.5
1,254,389	+		ABZR87_RS05875	0.34	-0.3
1,254,389	+		ABZR87_RS05875	0.34	-0.4
1,254,389	+		ABZR87_RS05875	0.34	+0.1
1,254,389	+		ABZR87_RS05875	0.34	-1.5
1,254,390	-		ABZR87_RS05875	0.34	-1.7
1,254,407	+		ABZR87_RS05875	0.35	+0.1
1,254,407	+		ABZR87_RS05875	0.35	+0.0
1,254,407	+		ABZR87_RS05875	0.35	-1.3
1,254,417	+		ABZR87_RS05875	0.37	+2.5
1,254,417	+		ABZR87_RS05875	0.37	+0.1
1,254,417	+		ABZR87_RS05875	0.37	+1.2
1,254,418	-		ABZR87_RS05875	0.37	-1.2
1,254,465	+		ABZR87_RS05875	0.42	+1.0
1,254,465	+		ABZR87_RS05875	0.42	+2.2
1,254,466	-		ABZR87_RS05875	0.42	-0.2
1,254,466	-		ABZR87_RS05875	0.42	-0.3
1,254,466	-		ABZR87_RS05875	0.42	+0.8
1,254,482	+		ABZR87_RS05875	0.44	-0.3
1,254,482	+		ABZR87_RS05875	0.44	+1.3
1,254,483	-		ABZR87_RS05875	0.44	+0.4
1,254,664	-		ABZR87_RS05875	0.63	+0.1
1,254,667	+		ABZR87_RS05875	0.64	-0.5
1,254,667	+		ABZR87_RS05875	0.64	+0.1
1,254,667	+		ABZR87_RS05875	0.64	+0.6
1,254,667	+		ABZR87_RS05875	0.64	+0.3
1,254,667	+		ABZR87_RS05875	0.64	+0.2
1,254,668	-		ABZR87_RS05875	0.64	+1.2
1,254,668	-		ABZR87_RS05875	0.64	-1.2
1,254,668	-		ABZR87_RS05875	0.64	-1.3
1,254,668	-		ABZR87_RS05875	0.64	+0.9
1,254,696	+		ABZR87_RS05875	0.67	-0.4
1,254,697	-		ABZR87_RS05875	0.67	+0.8
1,254,697	-		ABZR87_RS05875	0.67	+0.3
1,254,707	+		ABZR87_RS05875	0.68	-0.5
1,254,707	+		ABZR87_RS05875	0.68	+2.8
1,254,708	-		ABZR87_RS05875	0.68	-0.3
1,254,712	+		ABZR87_RS05875	0.68	-0.2
1,254,712	+		ABZR87_RS05875	0.68	-0.7
1,254,712	+		ABZR87_RS05875	0.68	+0.6
1,254,712	+		ABZR87_RS05875	0.68	-1.7
1,254,713	-		ABZR87_RS05875	0.69	-0.9
1,254,713	-		ABZR87_RS05875	0.69	-0.7
1,254,756	+		ABZR87_RS05875	0.73	+1.2
1,254,756	+		ABZR87_RS05875	0.73	+0.8
1,254,756	+		ABZR87_RS05875	0.73	+0.1
1,254,756	+		ABZR87_RS05875	0.73	+0.4
1,254,756	+		ABZR87_RS05875	0.73	+0.7
1,254,756	+		ABZR87_RS05875	0.73	-1.2
1,254,756	+		ABZR87_RS05875	0.73	+0.3
1,254,756	+		ABZR87_RS05875	0.73	-1.5
1,254,757	-		ABZR87_RS05875	0.73	-0.9
1,254,757	-		ABZR87_RS05875	0.73	-2.0
1,254,757	-		ABZR87_RS05875	0.73	+0.6
1,254,782	+		ABZR87_RS05875	0.76	+0.8
1,254,782	+		ABZR87_RS05875	0.76	+0.7
1,254,783	-		ABZR87_RS05875	0.76	+0.4
1,254,798	+		ABZR87_RS05875	0.78	+0.3
1,254,798	+		ABZR87_RS05875	0.78	-0.6
1,254,798	+		ABZR87_RS05875	0.78	+0.5
1,254,799	-		ABZR87_RS05875	0.78	+0.5
1,254,799	-		ABZR87_RS05875	0.78	-0.4
1,254,799	-		ABZR87_RS05875	0.78	-1.0
1,254,799	-		ABZR87_RS05875	0.78	-0.1
1,254,799	-		ABZR87_RS05875	0.78	-0.2
1,254,880	+		ABZR87_RS05875	0.87	+3.0
1,254,880	+		ABZR87_RS05875	0.87	-0.6
1,254,881	-		ABZR87_RS05875	0.87	-0.1
1,254,881	-		ABZR87_RS05875	0.87	-1.3
1,254,881	-		ABZR87_RS05875	0.87	+0.4
1,254,881	-		ABZR87_RS05875	0.87	+0.2
1,254,903	+		ABZR87_RS05875	0.89	+1.4
1,254,904	-		ABZR87_RS05875	0.89	+1.1
1,254,904	-		ABZR87_RS05875	0.89	-0.6
1,254,904	-		ABZR87_RS05875	0.89	+0.4
1,254,904	-		ABZR87_RS05875	0.89	+0.8
1,254,904	-		ABZR87_RS05875	0.89	+0.1
1,254,904	-		ABZR87_RS05875	0.89	-0.1
1,254,904	-		ABZR87_RS05875	0.89	+0.6
1,254,989	+				+0.3
1,254,989	+				-1.4
1,254,989	+				-1.0
1,254,989	+				+0.4
1,254,990	-				+0.9
1,255,020	+				-0.0
1,255,023	+				+2.1
1,255,023	+				-1.9
1,255,023	+				+0.4
1,255,023	+				+0.0
1,255,023	+				-0.5
1,255,023	+				-0.4
1,255,024	-				+0.2
1,255,024	-				+0.5