Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05720

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,216,581	+		ABZR87_RS05715	0.40	+0.4
1,216,603	+		ABZR87_RS05715	0.41	-0.3
1,216,603	+		ABZR87_RS05715	0.41	-0.0
1,216,603	+		ABZR87_RS05715	0.41	+0.5
1,216,603	+		ABZR87_RS05715	0.41	-0.1
1,216,603	+		ABZR87_RS05715	0.41	+1.1
1,216,604	-		ABZR87_RS05715	0.41	-0.3
1,216,604	-		ABZR87_RS05715	0.41	+2.1
1,216,604	-		ABZR87_RS05715	0.41	+4.3
1,216,616	+		ABZR87_RS05715	0.42	-0.5
1,216,616	+		ABZR87_RS05715	0.42	+0.1
1,216,617	-		ABZR87_RS05715	0.42	-0.2
1,216,617	-		ABZR87_RS05715	0.42	+0.7
1,216,665	+		ABZR87_RS05715	0.45	+0.8
1,216,666	-		ABZR87_RS05715	0.45	+0.5
1,216,666	-		ABZR87_RS05715	0.45	-1.5
1,216,733	+		ABZR87_RS05715	0.49	+0.5
1,216,733	+		ABZR87_RS05715	0.49	+0.4
1,216,733	+		ABZR87_RS05715	0.49	+0.1
1,216,733	+		ABZR87_RS05715	0.49	+1.2
1,216,733	+		ABZR87_RS05715	0.49	-0.1
1,216,734	-		ABZR87_RS05715	0.49	-0.4
1,216,734	-		ABZR87_RS05715	0.49	-0.5
1,216,734	-		ABZR87_RS05715	0.49	-0.1
1,216,783	+		ABZR87_RS05715	0.52	-0.8
1,216,783	+		ABZR87_RS05715	0.52	-1.1
1,216,783	+		ABZR87_RS05715	0.52	+0.2
1,216,783	+		ABZR87_RS05715	0.52	-0.1
1,216,783	+		ABZR87_RS05715	0.52	-1.5
1,216,784	-		ABZR87_RS05715	0.52	+0.1
1,216,784	-		ABZR87_RS05715	0.52	+0.4
1,216,784	-		ABZR87_RS05715	0.52	-0.0
1,216,800	+		ABZR87_RS05715	0.53	+1.1
1,216,800	+		ABZR87_RS05715	0.53	+1.3
1,216,801	-		ABZR87_RS05715	0.53	+1.2
1,216,801	-		ABZR87_RS05715	0.53	+1.3
1,216,823	-		ABZR87_RS05715	0.54	+0.4
1,216,823	-		ABZR87_RS05715	0.54	-0.4
1,216,868	+		ABZR87_RS05715	0.57	-0.1
1,216,868	+		ABZR87_RS05715	0.57	-0.1
1,216,868	+		ABZR87_RS05715	0.57	-1.1
1,216,868	+		ABZR87_RS05715	0.57	-0.1
1,216,869	-		ABZR87_RS05715	0.57	-0.8
1,216,869	-		ABZR87_RS05715	0.57	-2.7
1,216,869	-		ABZR87_RS05715	0.57	+0.9
1,216,869	-		ABZR87_RS05715	0.57	+1.5
1,216,910	-		ABZR87_RS05715	0.60	-0.3
1,216,921	+		ABZR87_RS05715	0.60	+0.2
1,216,921	+		ABZR87_RS05715	0.60	+0.2
1,216,921	+		ABZR87_RS05715	0.60	+1.3
1,216,921	+		ABZR87_RS05715	0.60	-1.6
1,216,922	-		ABZR87_RS05715	0.60	-0.5
1,216,922	-		ABZR87_RS05715	0.60	+0.2
1,216,992	+		ABZR87_RS05715	0.65	-0.6
1,216,992	+		ABZR87_RS05715	0.65	-0.3
1,216,993	-		ABZR87_RS05715	0.65	+0.1
1,217,079	+		ABZR87_RS05715	0.70	-0.4
1,217,079	+		ABZR87_RS05715	0.70	+0.8
1,217,079	+		ABZR87_RS05715	0.70	+4.0
1,217,079	+		ABZR87_RS05715	0.70	+0.5
1,217,079	+		ABZR87_RS05715	0.70	-0.5
1,217,079	+		ABZR87_RS05715	0.70	-0.1
1,217,079	+		ABZR87_RS05715	0.70	+0.5
1,217,079	+		ABZR87_RS05715	0.70	-0.3
1,217,079	+		ABZR87_RS05715	0.70	+1.5
1,217,079	+		ABZR87_RS05715	0.70	+0.2
1,217,080	-		ABZR87_RS05715	0.70	+0.1
1,217,080	-		ABZR87_RS05715	0.70	-0.3
1,217,080	-		ABZR87_RS05715	0.70	+1.5
1,217,080	-		ABZR87_RS05715	0.70	+1.7
1,217,080	-		ABZR87_RS05715	0.70	-0.1
1,217,080	-		ABZR87_RS05715	0.70	-0.5
1,217,080	-		ABZR87_RS05715	0.70	-0.8
1,217,166	+		ABZR87_RS05715	0.75	+0.2
1,217,166	+		ABZR87_RS05715	0.75	+1.7
1,217,167	-		ABZR87_RS05715	0.75	-1.1
1,217,167	-		ABZR87_RS05715	0.75	-0.2
1,217,167	-		ABZR87_RS05715	0.75	-1.2
1,217,167	-		ABZR87_RS05715	0.75	-0.5
1,217,182	-		ABZR87_RS05715	0.76	-1.0
1,217,182	-		ABZR87_RS05715	0.76	-1.1
1,217,311	+		ABZR87_RS05715	0.83	-0.1
1,217,313	+		ABZR87_RS05715	0.84	+0.2
1,217,313	+		ABZR87_RS05715	0.84	+0.5
1,217,313	+		ABZR87_RS05715	0.84	-0.5
1,217,313	+		ABZR87_RS05715	0.84	+1.2
1,217,313	+		ABZR87_RS05715	0.84	-0.6
1,217,313	+		ABZR87_RS05715	0.84	+1.5
1,217,313	+		ABZR87_RS05715	0.84	-1.2
1,217,313	+		ABZR87_RS05715	0.84	-2.4
1,217,313	+		ABZR87_RS05715	0.84	+0.2
1,217,313	+		ABZR87_RS05715	0.84	+0.2
1,217,314	-		ABZR87_RS05715	0.84	-0.5
1,217,314	-		ABZR87_RS05715	0.84	+0.3
1,217,314	-		ABZR87_RS05715	0.84	+1.4
1,217,314	-		ABZR87_RS05715	0.84	-0.1
1,217,314	-		ABZR87_RS05715	0.84	-0.2
1,217,314	-		ABZR87_RS05715	0.84	-0.2
1,217,314	-		ABZR87_RS05715	0.84	+0.1
1,217,315	+		ABZR87_RS05715	0.84	+1.2
1,217,315	+		ABZR87_RS05715	0.84	-0.4
1,217,315	+		ABZR87_RS05715	0.84	-0.7
1,217,315	+		ABZR87_RS05715	0.84	+0.6
1,217,316	-		ABZR87_RS05715	0.84	+1.4
1,217,316	-		ABZR87_RS05715	0.84	-0.1
1,217,321	+		ABZR87_RS05715	0.84	+0.6
1,217,321	+		ABZR87_RS05715	0.84	-0.3
1,217,321	+		ABZR87_RS05715	0.84	+0.7
1,217,322	-		ABZR87_RS05715	0.84	-0.1
1,217,322	-		ABZR87_RS05715	0.84	-0.6
1,217,322	-		ABZR87_RS05715	0.84	+0.3
1,217,322	-		ABZR87_RS05715	0.84	+5.5
1,217,322	-		ABZR87_RS05715	0.84	-0.6
1,217,322	-		ABZR87_RS05715	0.84	-0.6
1,217,329	+		ABZR87_RS05715	0.85	+0.1
1,217,329	+		ABZR87_RS05715	0.85	+0.6
1,217,329	+		ABZR87_RS05715	0.85	-0.6
1,217,329	+		ABZR87_RS05715	0.85	+0.6
1,217,330	-		ABZR87_RS05715	0.85	+0.1
1,217,386	+		ABZR87_RS05715	0.88	-1.0
1,217,386	+		ABZR87_RS05715	0.88	+0.4
1,217,386	+		ABZR87_RS05715	0.88	+0.1
1,217,386	+		ABZR87_RS05715	0.88	-0.1
1,217,419	+		ABZR87_RS05715	0.90	+1.8
1,217,419	+		ABZR87_RS05715	0.90	-0.5
1,217,419	+		ABZR87_RS05715	0.90	+1.8
1,217,419	+		ABZR87_RS05715	0.90	+0.3
1,217,420	-				-0.5
1,217,420	-				+0.3
1,217,420	-				+0.0
1,217,420	-				+0.0
1,217,420	-				-0.1
1,217,420	-				+0.1
1,217,420	-				+0.6
1,217,420	-				+0.8
1,217,427	+				-0.4
1,217,427	+				+0.3
1,217,427	+				-0.5
1,217,427	+				+0.6
1,217,427	+				-1.0
1,217,428	-				-0.2
1,217,428	-				+0.8
1,217,428	-				+0.8
1,217,428	-				-0.5
1,217,428	-				-0.0
1,217,428	-				-0.4
1,217,437	+				+1.0
1,217,456	-				-3.2
1,217,456	-				+0.7
1,217,482	+				-0.5
1,217,482	+				-0.1
1,217,482	+				-0.3
1,217,483	-				+0.5
1,217,483	-				-0.3
1,217,543	+				-0.2
1,217,543	+				-0.1
1,217,543	+				-0.3
1,217,543	+				-0.3
1,217,559	+				+0.4
1,217,570	+				-0.4
1,217,570	+				-0.3
1,217,570	+				+1.4
1,217,570	+				-1.1
1,217,570	+				-1.6
1,217,570	+				-1.4
1,217,571	-				+0.8
1,217,571	-				+2.8
1,217,571	-				+0.7
1,217,571	-				-1.3
1,217,586	+				+1.1
1,217,586	+				+0.2
1,217,586	+				-0.8
1,217,587	-				-0.8
1,217,647	+				+0.9
1,217,647	+				+0.6
1,217,647	+				-0.2
1,217,647	+				-1.3
1,217,647	+				+0.1
1,217,648	-				+1.0
1,217,676	+				+1.2
1,217,676	+				-0.3
1,217,676	+				-0.3
1,217,676	+				-0.4
1,217,676	+				-0.7
1,217,676	+				+0.4
1,217,676	+				-0.4
1,217,677	-				-0.2
1,217,677	-				-0.9
1,217,677	-				-0.3
1,217,677	-				+0.0
1,217,775	+		ABZR87_RS05720	0.13	+0.1
1,217,775	+		ABZR87_RS05720	0.13	-0.0
1,217,775	+		ABZR87_RS05720	0.13	-0.6
1,217,775	+		ABZR87_RS05720	0.13	+0.7
1,217,775	+		ABZR87_RS05720	0.13	+0.6
1,217,775	+		ABZR87_RS05720	0.13	+0.5
1,217,775	+		ABZR87_RS05720	0.13	+3.1
1,217,775	+		ABZR87_RS05720	0.13	-0.7
1,217,776	-		ABZR87_RS05720	0.13	-2.1
1,217,776	-		ABZR87_RS05720	0.13	+0.2
1,217,776	-		ABZR87_RS05720	0.13	-0.3
1,217,799	+		ABZR87_RS05720	0.14	+0.1
1,217,799	+		ABZR87_RS05720	0.14	-0.5
1,217,800	-		ABZR87_RS05720	0.14	+0.9
1,217,830	+		ABZR87_RS05720	0.16	-0.4
1,217,830	+		ABZR87_RS05720	0.16	+0.2
1,217,830	+		ABZR87_RS05720	0.16	-0.4
1,217,830	+		ABZR87_RS05720	0.16	-2.6
1,217,830	+		ABZR87_RS05720	0.16	-0.3
1,217,830	+		ABZR87_RS05720	0.16	+0.1
1,217,830	+		ABZR87_RS05720	0.16	+0.3
1,217,830	+		ABZR87_RS05720	0.16	+0.2
1,217,830	+		ABZR87_RS05720	0.16	+0.4
1,217,830	+		ABZR87_RS05720	0.16	+0.2
1,217,831	-		ABZR87_RS05720	0.16	+1.5
1,217,831	-		ABZR87_RS05720	0.16	-2.0
1,217,831	-		ABZR87_RS05720	0.16	+0.5
1,217,831	-		ABZR87_RS05720	0.16	-0.9
1,217,831	-		ABZR87_RS05720	0.16	+0.4
1,217,831	-		ABZR87_RS05720	0.16	-0.3
1,217,863	+		ABZR87_RS05720	0.17	+1.1
1,217,864	-		ABZR87_RS05720	0.18	+0.3
1,217,864	-		ABZR87_RS05720	0.18	-0.9
1,217,880	+		ABZR87_RS05720	0.18	+4.0
1,217,880	+		ABZR87_RS05720	0.18	+0.6
1,217,880	+		ABZR87_RS05720	0.18	+0.9
1,217,880	+		ABZR87_RS05720	0.18	-0.3
1,217,881	-		ABZR87_RS05720	0.18	-1.3
1,217,881	-		ABZR87_RS05720	0.18	-0.2
1,217,881	-		ABZR87_RS05720	0.18	-0.5
1,217,881	-		ABZR87_RS05720	0.18	+0.3
1,217,943	+		ABZR87_RS05720	0.22	+1.2
1,217,944	+		ABZR87_RS05720	0.22	+0.6
1,217,944	-		ABZR87_RS05720	0.22	-1.7
1,217,944	-		ABZR87_RS05720	0.22	+0.2
1,217,978	+		ABZR87_RS05720	0.24	-0.2
1,217,978	+		ABZR87_RS05720	0.24	+0.0
1,217,978	+		ABZR87_RS05720	0.24	+1.6
1,217,978	+		ABZR87_RS05720	0.24	-0.3
1,217,978	+		ABZR87_RS05720	0.24	+0.7
1,217,978	+		ABZR87_RS05720	0.24	+0.0
1,217,978	+		ABZR87_RS05720	0.24	+1.2
1,217,978	+		ABZR87_RS05720	0.24	+0.0
1,217,978	+		ABZR87_RS05720	0.24	-1.2
1,217,978	+		ABZR87_RS05720	0.24	+0.6
1,217,978	+		ABZR87_RS05720	0.24	+0.4
1,217,978	+		ABZR87_RS05720	0.24	+0.3
1,217,978	+		ABZR87_RS05720	0.24	+0.2
1,217,978	+		ABZR87_RS05720	0.24	+0.2
1,217,978	+		ABZR87_RS05720	0.24	-0.0
1,217,978	+		ABZR87_RS05720	0.24	-0.7
1,217,979	-		ABZR87_RS05720	0.24	-1.0
1,217,979	-		ABZR87_RS05720	0.24	-0.5
1,217,979	-		ABZR87_RS05720	0.24	-0.2
1,217,979	-		ABZR87_RS05720	0.24	+0.6
1,217,979	-		ABZR87_RS05720	0.24	-0.8
1,217,979	-		ABZR87_RS05720	0.24	+1.8
1,217,979	-		ABZR87_RS05720	0.24	+1.6
1,217,979	-		ABZR87_RS05720	0.24	-1.1
1,217,979	-		ABZR87_RS05720	0.24	+0.9
1,217,979	-		ABZR87_RS05720	0.24	+0.1
1,217,979	-		ABZR87_RS05720	0.24	-0.9
1,217,979	-		ABZR87_RS05720	0.24	-0.1
1,218,002	-		ABZR87_RS05720	0.25	+2.8
1,218,002	-		ABZR87_RS05720	0.25	-0.6
1,218,057	+		ABZR87_RS05720	0.28	-1.1
1,218,057	+		ABZR87_RS05720	0.28	+0.2
1,218,058	-		ABZR87_RS05720	0.28	+2.1
1,218,058	-		ABZR87_RS05720	0.28	+1.1
1,218,058	-		ABZR87_RS05720	0.28	-2.4
1,218,058	-		ABZR87_RS05720	0.28	+0.7
1,218,058	-		ABZR87_RS05720	0.28	+0.4
1,218,141	+		ABZR87_RS05720	0.33	-0.3
1,218,141	+		ABZR87_RS05720	0.33	-0.3
1,218,141	+		ABZR87_RS05720	0.33	-1.3
1,218,141	+		ABZR87_RS05720	0.33	+0.5
1,218,141	+		ABZR87_RS05720	0.33	-0.2
1,218,141	+		ABZR87_RS05720	0.33	+1.0
1,218,141	+		ABZR87_RS05720	0.33	+0.1
1,218,142	-		ABZR87_RS05720	0.33	+0.1
1,218,142	-		ABZR87_RS05720	0.33	+1.3
1,218,142	-		ABZR87_RS05720	0.33	-1.2
1,218,142	-		ABZR87_RS05720	0.33	+0.3
1,218,142	-		ABZR87_RS05720	0.33	+0.9
1,218,151	+		ABZR87_RS05720	0.33	-0.8
1,218,152	-		ABZR87_RS05720	0.33	+0.9
1,218,202	+		ABZR87_RS05720	0.36	-0.3
1,218,202	+		ABZR87_RS05720	0.36	+0.2
1,218,202	+		ABZR87_RS05720	0.36	-0.1
1,218,202	+		ABZR87_RS05720	0.36	+0.9
1,218,202	+		ABZR87_RS05720	0.36	+2.2
1,218,203	-		ABZR87_RS05720	0.36	-0.1
1,218,203	-		ABZR87_RS05720	0.36	+2.5
1,218,203	-		ABZR87_RS05720	0.36	+0.4
1,218,203	-		ABZR87_RS05720	0.36	+0.9
1,218,203	-		ABZR87_RS05720	0.36	+1.5
1,218,203	-		ABZR87_RS05720	0.36	+0.4
1,218,203	-		ABZR87_RS05720	0.36	+2.0
1,218,203	-		ABZR87_RS05720	0.36	-0.6
1,218,208	+		ABZR87_RS05720	0.36	+0.2
1,218,208	+		ABZR87_RS05720	0.36	+0.9
1,218,208	+		ABZR87_RS05720	0.36	-0.2
1,218,208	+		ABZR87_RS05720	0.36	-0.3
1,218,208	+		ABZR87_RS05720	0.36	+0.1
1,218,209	-		ABZR87_RS05720	0.36	-0.1
1,218,209	-		ABZR87_RS05720	0.36	+0.4
1,218,209	-		ABZR87_RS05720	0.36	-1.8
1,218,209	-		ABZR87_RS05720	0.36	-0.4
1,218,209	-		ABZR87_RS05720	0.36	-0.2
1,218,209	-		ABZR87_RS05720	0.36	+1.5
1,218,209	-		ABZR87_RS05720	0.36	+0.6
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1,220,276	-		ABZR87_RS05725	0.59	-0.6
1,220,276	-		ABZR87_RS05725	0.59	+0.6
1,220,276	-		ABZR87_RS05725	0.59	+3.5
1,220,276	-		ABZR87_RS05725	0.59	+0.0
1,220,276	-		ABZR87_RS05725	0.59	-1.0
1,220,276	-		ABZR87_RS05725	0.59	-0.1
1,220,276	-		ABZR87_RS05725	0.59	-0.1
1,220,276	-		ABZR87_RS05725	0.59	-0.7
1,220,276	-		ABZR87_RS05725	0.59	-0.5
1,220,279	+		ABZR87_RS05725	0.60	-0.9
1,220,279	+		ABZR87_RS05725	0.60	+0.2
1,220,279	+		ABZR87_RS05725	0.60	+0.7
1,220,279	+		ABZR87_RS05725	0.60	-0.2
1,220,279	+		ABZR87_RS05725	0.60	-0.6
1,220,279	+		ABZR87_RS05725	0.60	+0.0
1,220,280	-		ABZR87_RS05725	0.60	-0.3
1,220,280	-		ABZR87_RS05725	0.60	+2.6
1,220,280	-		ABZR87_RS05725	0.60	+2.4
1,220,280	-		ABZR87_RS05725	0.60	+0.6
1,220,280	-		ABZR87_RS05725	0.60	-0.1
1,220,280	-		ABZR87_RS05725	0.60	-0.1
1,220,280	-		ABZR87_RS05725	0.60	+0.5
1,220,281	+		ABZR87_RS05725	0.60	+0.8
1,220,281	+		ABZR87_RS05725	0.60	+0.2
1,220,281	+		ABZR87_RS05725	0.60	+0.2
1,220,282	-		ABZR87_RS05725	0.60	-2.3
1,220,282	-		ABZR87_RS05725	0.60	+0.5
1,220,282	-		ABZR87_RS05725	0.60	-0.1
1,220,297	+		ABZR87_RS05725	0.61	-0.2
1,220,297	+		ABZR87_RS05725	0.61	+0.2
1,220,297	+		ABZR87_RS05725	0.61	-0.1
1,220,297	+		ABZR87_RS05725	0.61	+1.2
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1,220,297	+		ABZR87_RS05725	0.61	-0.8
1,220,298	-		ABZR87_RS05725	0.61	-0.6
1,220,298	-		ABZR87_RS05725	0.61	+2.6
1,220,298	-		ABZR87_RS05725	0.61	+2.2
1,220,298	-		ABZR87_RS05725	0.61	-0.3
1,220,298	-		ABZR87_RS05725	0.61	-0.5
1,220,298	-		ABZR87_RS05725	0.61	-0.8
1,220,377	+		ABZR87_RS05725	0.66	-1.0