Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08460 and HSERO_RS08465 are separated by 11 nucleotides HSERO_RS08465 and HSERO_RS08470 are separated by 7 nucleotides HSERO_RS08470 and HSERO_RS08475 overlap by 4 nucleotides HSERO_RS08475 and HSERO_RS08480 overlap by 4 nucleotides
HSERO_RS08460: HSERO_RS08460 - chemotaxis protein CheY, at 1,926,122 to 1,927,183
_RS08460
HSERO_RS08465: HSERO_RS08465 - hypothetical protein, at 1,927,195 to 1,927,812
_RS08465
HSERO_RS08470: HSERO_RS08470 - chemotaxis protein, at 1,927,820 to 1,928,662
_RS08470
HSERO_RS08475: HSERO_RS08475 - chemotaxis protein CheY, at 1,928,659 to 1,929,030
_RS08475
HSERO_RS08480: HSERO_RS08480 - chemotaxis protein CheA, at 1,929,027 to 1,931,540
_RS08480
Position (kb) 1927
1928
1929 Strain fitness (log2 ratio) -2
-1
0
1 at 1926.942 kb on + strand, within HSERO_RS08460 at 1926.955 kb on - strand, within HSERO_RS08460 at 1926.995 kb on + strand, within HSERO_RS08460 at 1927.119 kb on + strand at 1927.203 kb on + strand at 1927.715 kb on + strand at 1927.729 kb on - strand, within HSERO_RS08465 at 1927.729 kb on - strand, within HSERO_RS08465 at 1927.917 kb on - strand, within HSERO_RS08470 at 1928.077 kb on + strand, within HSERO_RS08470 at 1928.135 kb on + strand, within HSERO_RS08470 at 1928.154 kb on - strand, within HSERO_RS08470 at 1928.187 kb on - strand, within HSERO_RS08470 at 1928.270 kb on - strand, within HSERO_RS08470 at 1928.336 kb on - strand, within HSERO_RS08470 at 1928.553 kb on + strand, within HSERO_RS08470 at 1928.610 kb on - strand at 1928.914 kb on + strand, within HSERO_RS08475 at 1928.952 kb on + strand, within HSERO_RS08475 at 1929.020 kb on - strand at 1929.169 kb on - strand at 1929.326 kb on + strand, within HSERO_RS08480 at 1929.425 kb on - strand, within HSERO_RS08480 at 1929.425 kb on - strand, within HSERO_RS08480 at 1929.427 kb on - strand, within HSERO_RS08480 at 1929.459 kb on + strand, within HSERO_RS08480 at 1929.560 kb on + strand, within HSERO_RS08480
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 1,926,942 + HSERO_RS08460 0.77 -1.3 1,926,955 - HSERO_RS08460 0.78 -0.5 1,926,995 + HSERO_RS08460 0.82 +0.5 1,927,119 + +0.4 1,927,203 + -1.9 1,927,715 + +0.7 1,927,729 - HSERO_RS08465 0.86 +0.3 1,927,729 - HSERO_RS08465 0.86 +1.0 1,927,917 - HSERO_RS08470 0.12 +1.6 1,928,077 + HSERO_RS08470 0.30 +0.4 1,928,135 + HSERO_RS08470 0.37 -0.1 1,928,154 - HSERO_RS08470 0.40 -0.0 1,928,187 - HSERO_RS08470 0.44 +1.3 1,928,270 - HSERO_RS08470 0.53 +0.5 1,928,336 - HSERO_RS08470 0.61 +1.1 1,928,553 + HSERO_RS08470 0.87 -0.2 1,928,610 - +1.0 1,928,914 + HSERO_RS08475 0.69 -0.2 1,928,952 + HSERO_RS08475 0.79 -0.3 1,929,020 - +0.2 1,929,169 - -0.1 1,929,326 + HSERO_RS08480 0.12 -0.3 1,929,425 - HSERO_RS08480 0.16 +0.4 1,929,425 - HSERO_RS08480 0.16 -1.0 1,929,427 - HSERO_RS08480 0.16 -0.0 1,929,459 + HSERO_RS08480 0.17 +1.4 1,929,560 + HSERO_RS08480 0.21 +0.5
Or see this region's nucleotide sequence