Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08215 and HSERO_RS08220 are separated by 61 nucleotides HSERO_RS08220 and HSERO_RS08225 are separated by 39 nucleotides HSERO_RS08225 and HSERO_RS08230 are separated by 163 nucleotides
HSERO_RS08215: HSERO_RS08215 - transporter, at 1,874,417 to 1,874,632
_RS08215
HSERO_RS08220: HSERO_RS08220 - diguanylate phosphodiesterase, at 1,874,694 to 1,875,521
_RS08220
HSERO_RS08225: HSERO_RS08225 - alpha/beta hydrolase, at 1,875,561 to 1,876,139
_RS08225
HSERO_RS08230: HSERO_RS08230 - sulfate/thiosulfate transporter subunit, at 1,876,303 to 1,877,193
_RS08230
Position (kb) 1875
1876
1877 Strain fitness (log2 ratio) -1
0
1 at 1874.604 kb on - strand, within HSERO_RS08215 at 1874.714 kb on + strand at 1874.839 kb on + strand, within HSERO_RS08220 at 1875.038 kb on + strand, within HSERO_RS08220 at 1875.090 kb on - strand, within HSERO_RS08220 at 1875.189 kb on - strand, within HSERO_RS08220 at 1875.269 kb on + strand, within HSERO_RS08220 at 1875.297 kb on - strand, within HSERO_RS08220 at 1875.549 kb on + strand at 1875.635 kb on + strand, within HSERO_RS08225 at 1875.966 kb on - strand, within HSERO_RS08225 at 1876.007 kb on + strand, within HSERO_RS08225 at 1876.019 kb on + strand, within HSERO_RS08225 at 1876.135 kb on + strand at 1876.245 kb on - strand at 1876.424 kb on - strand, within HSERO_RS08230 at 1876.497 kb on - strand, within HSERO_RS08230 at 1876.703 kb on + strand, within HSERO_RS08230 at 1876.771 kb on - strand, within HSERO_RS08230
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 1,874,604 - HSERO_RS08215 0.87 +0.3 1,874,714 + +0.2 1,874,839 + HSERO_RS08220 0.18 -0.1 1,875,038 + HSERO_RS08220 0.42 -0.1 1,875,090 - HSERO_RS08220 0.48 +0.0 1,875,189 - HSERO_RS08220 0.60 +0.2 1,875,269 + HSERO_RS08220 0.69 -0.4 1,875,297 - HSERO_RS08220 0.73 +0.3 1,875,549 + +0.2 1,875,635 + HSERO_RS08225 0.13 +0.6 1,875,966 - HSERO_RS08225 0.70 +0.5 1,876,007 + HSERO_RS08225 0.77 +0.1 1,876,019 + HSERO_RS08225 0.79 +0.6 1,876,135 + +0.1 1,876,245 - -0.2 1,876,424 - HSERO_RS08230 0.14 +0.0 1,876,497 - HSERO_RS08230 0.22 -0.1 1,876,703 + HSERO_RS08230 0.45 +0.1 1,876,771 - HSERO_RS08230 0.53 -0.8
Or see this region's nucleotide sequence