Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03405 and HSERO_RS03410 are separated by 220 nucleotides HSERO_RS03410 and HSERO_RS03415 are separated by 105 nucleotides HSERO_RS03415 and HSERO_RS03420 are separated by 58 nucleotides HSERO_RS03420 and HSERO_RS03425 are separated by 321 nucleotides
HSERO_RS03405: HSERO_RS03405 - pyridoxamine 5'-phosphate oxidase, at 746,866 to 747,504
_RS03405
HSERO_RS03410: HSERO_RS03410 - polyisoprenoid-binding protein, at 747,725 to 748,297
_RS03410
HSERO_RS03415: HSERO_RS03415 - polyisoprenoid-binding protein, at 748,403 to 748,966
_RS03415
HSERO_RS03420: HSERO_RS03420 - cytochrome B561, at 749,025 to 749,549
_RS03420
HSERO_RS03425: HSERO_RS03425 - adenylosuccinate lyase, at 749,871 to 751,238
_RS03425
Position (kb) 748
749 Strain fitness (log2 ratio) -1
0
1
2 at 747.739 kb on - strand at 747.903 kb on - strand, within HSERO_RS03410 at 747.989 kb on - strand, within HSERO_RS03410 at 748.037 kb on - strand, within HSERO_RS03410 at 748.221 kb on - strand, within HSERO_RS03410 at 748.308 kb on + strand at 748.679 kb on - strand, within HSERO_RS03415 at 748.768 kb on - strand, within HSERO_RS03415 at 748.870 kb on - strand, within HSERO_RS03415 at 748.993 kb on + strand at 749.046 kb on - strand at 749.293 kb on - strand, within HSERO_RS03420 at 749.387 kb on - strand, within HSERO_RS03420 at 749.544 kb on + strand at 749.552 kb on - strand at 749.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 747,739 - -0.2 747,903 - HSERO_RS03410 0.31 +0.3 747,989 - HSERO_RS03410 0.46 -0.4 748,037 - HSERO_RS03410 0.54 +0.0 748,221 - HSERO_RS03410 0.87 -0.2 748,308 + -0.2 748,679 - HSERO_RS03415 0.49 -0.5 748,768 - HSERO_RS03415 0.65 +1.8 748,870 - HSERO_RS03415 0.83 +0.9 748,993 + +0.0 749,046 - +0.1 749,293 - HSERO_RS03420 0.51 -0.2 749,387 - HSERO_RS03420 0.69 -0.3 749,544 + -1.6 749,552 - +0.9 749,774 - +0.1
Or see this region's nucleotide sequence