Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01520 and HSERO_RS01525 are separated by 22 nucleotides HSERO_RS01525 and HSERO_RS01530 are separated by 94 nucleotides HSERO_RS01530 and HSERO_RS01535 are separated by 417 nucleotides
HSERO_RS01520: HSERO_RS01520 - hemagglutinin, at 330,490 to 334,758
_RS01520
HSERO_RS01525: HSERO_RS01525 - hypothetical protein, at 334,781 to 335,539
_RS01525
HSERO_RS01530: HSERO_RS01530 - 3',5'-cyclic-nucleotide phosphodiesterase, at 335,634 to 336,407
_RS01530
HSERO_RS01535: HSERO_RS01535 - phosphohydrolase with GAF sensor, at 336,825 to 338,483
_RS01535
Position (kb) 335
336
337 Strain fitness (log2 ratio) -1
0
1 at 334.766 kb on + strand at 334.800 kb on - strand at 335.017 kb on - strand, within HSERO_RS01525 at 335.061 kb on + strand, within HSERO_RS01525 at 335.061 kb on + strand, within HSERO_RS01525 at 335.134 kb on + strand, within HSERO_RS01525 at 335.142 kb on - strand, within HSERO_RS01525 at 335.251 kb on + strand, within HSERO_RS01525 at 335.384 kb on - strand, within HSERO_RS01525 at 335.531 kb on + strand at 335.555 kb on - strand at 335.736 kb on - strand, within HSERO_RS01530 at 335.800 kb on - strand, within HSERO_RS01530 at 335.987 kb on - strand, within HSERO_RS01530 at 335.999 kb on - strand, within HSERO_RS01530 at 336.001 kb on - strand, within HSERO_RS01530 at 336.349 kb on - strand at 336.349 kb on - strand at 336.470 kb on - strand at 336.526 kb on + strand at 336.675 kb on - strand at 336.675 kb on - strand at 336.752 kb on + strand at 336.787 kb on + strand at 336.892 kb on + strand at 336.988 kb on - strand at 337.195 kb on + strand, within HSERO_RS01535
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 334,766 + -0.5 334,800 - +0.1 335,017 - HSERO_RS01525 0.31 -0.0 335,061 + HSERO_RS01525 0.37 +0.5 335,061 + HSERO_RS01525 0.37 +1.6 335,134 + HSERO_RS01525 0.47 +0.1 335,142 - HSERO_RS01525 0.48 -1.2 335,251 + HSERO_RS01525 0.62 -0.8 335,384 - HSERO_RS01525 0.79 -0.7 335,531 + -0.0 335,555 - +1.1 335,736 - HSERO_RS01530 0.13 +1.1 335,800 - HSERO_RS01530 0.21 +0.2 335,987 - HSERO_RS01530 0.46 +1.1 335,999 - HSERO_RS01530 0.47 -0.1 336,001 - HSERO_RS01530 0.47 +0.2 336,349 - +0.1 336,349 - +0.6 336,470 - +0.1 336,526 + -0.5 336,675 - +0.1 336,675 - -0.3 336,752 + +0.1 336,787 + -0.0 336,892 + -0.0 336,988 - +0.5 337,195 + HSERO_RS01535 0.22 +0.2
Or see this region's nucleotide sequence