Experiment: Minimal media pH8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26675 and AO356_26680 are separated by 83 nucleotides AO356_26680 and AO356_26685 are separated by 94 nucleotides AO356_26685 and AO356_26690 are separated by 75 nucleotides
AO356_26675: AO356_26675 - hypothetical protein, at 6,074,771 to 6,075,313
_26675
AO356_26680: AO356_26680 - hypothetical protein, at 6,075,397 to 6,076,095
_26680
AO356_26685: AO356_26685 - phosphate import ATP-binding protein PstB, at 6,076,190 to 6,076,951
_26685
AO356_26690: AO356_26690 - phosphate ABC transporter permease, at 6,077,027 to 6,077,938
_26690
Position (kb)
6075
6076
6077 Strain fitness (log2 ratio)
-1
0
1
2 at 6074.400 kb on - strand at 6074.420 kb on + strand at 6074.421 kb on - strand at 6074.625 kb on + strand at 6074.625 kb on + strand at 6074.628 kb on + strand at 6074.628 kb on + strand at 6074.641 kb on - strand at 6074.668 kb on - strand at 6074.681 kb on - strand at 6074.683 kb on - strand at 6074.866 kb on + strand, within AO356_26675 at 6074.866 kb on + strand, within AO356_26675 at 6075.096 kb on + strand, within AO356_26675 at 6075.097 kb on - strand, within AO356_26675 at 6075.121 kb on + strand, within AO356_26675 at 6075.122 kb on - strand, within AO356_26675 at 6075.122 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.124 kb on - strand, within AO356_26675 at 6075.294 kb on - strand at 6075.485 kb on + strand, within AO356_26680 at 6075.547 kb on + strand, within AO356_26680 at 6075.608 kb on - strand, within AO356_26680 at 6075.629 kb on + strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.932 kb on + strand, within AO356_26680 at 6076.086 kb on + strand at 6076.192 kb on - strand at 6076.212 kb on + strand at 6076.212 kb on + strand at 6076.212 kb on + strand at 6076.328 kb on - strand, within AO356_26685 at 6076.381 kb on - strand, within AO356_26685 at 6076.611 kb on - strand, within AO356_26685 at 6076.611 kb on - strand, within AO356_26685 at 6076.707 kb on + strand, within AO356_26685 at 6076.956 kb on - strand at 6077.001 kb on - strand at 6077.029 kb on - strand at 6077.031 kb on + strand at 6077.031 kb on + strand at 6077.051 kb on - strand at 6077.062 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal media pH8 remove 6,074,400 - -0.1 6,074,420 + -0.3 6,074,421 - +0.0 6,074,625 + +0.5 6,074,625 + +2.4 6,074,628 + +0.3 6,074,628 + +0.6 6,074,641 - +0.5 6,074,668 - +0.0 6,074,681 - -0.1 6,074,683 - -0.3 6,074,866 + AO356_26675 0.17 +0.4 6,074,866 + AO356_26675 0.17 +0.2 6,075,096 + AO356_26675 0.60 +0.4 6,075,097 - AO356_26675 0.60 +1.2 6,075,121 + AO356_26675 0.64 +0.6 6,075,122 - AO356_26675 0.65 +1.2 6,075,122 - AO356_26675 0.65 +1.6 6,075,124 - AO356_26675 0.65 +0.2 6,075,124 - AO356_26675 0.65 -0.3 6,075,124 - AO356_26675 0.65 +0.5 6,075,124 - AO356_26675 0.65 +0.5 6,075,294 - +0.1 6,075,485 + AO356_26680 0.13 -0.6 6,075,547 + AO356_26680 0.21 +0.0 6,075,608 - AO356_26680 0.30 -0.6 6,075,629 + AO356_26680 0.33 -1.0 6,075,630 - AO356_26680 0.33 +1.0 6,075,630 - AO356_26680 0.33 -1.0 6,075,701 + AO356_26680 0.43 -0.4 6,075,701 + AO356_26680 0.43 +0.8 6,075,701 + AO356_26680 0.43 +1.0 6,075,702 - AO356_26680 0.44 +1.2 6,075,702 - AO356_26680 0.44 +1.2 6,075,932 + AO356_26680 0.77 +1.0 6,076,086 + -0.2 6,076,192 - -0.7 6,076,212 + +0.5 6,076,212 + +0.3 6,076,212 + -0.7 6,076,328 - AO356_26685 0.18 +0.6 6,076,381 - AO356_26685 0.25 +0.1 6,076,611 - AO356_26685 0.55 -0.0 6,076,611 - AO356_26685 0.55 -1.1 6,076,707 + AO356_26685 0.68 +0.8 6,076,956 - +0.1 6,077,001 - +0.2 6,077,029 - +0.1 6,077,031 + -0.3 6,077,031 + -0.5 6,077,051 - +0.7 6,077,062 + +0.1
Or see this region's nucleotide sequence