Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05615

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,192,301	+				+2.3
1,192,302	-				+0.1
1,192,350	+				+2.7
1,192,351	-				-0.5
1,192,351	-				-1.0
1,192,351	-				+1.8
1,192,351	-				-1.1
1,192,353	-				+1.1
1,192,390	+				+0.3
1,192,390	+				+0.6
1,192,390	+				-1.4
1,192,391	-				+0.0
1,192,391	-				-0.3
1,192,391	-				+2.7
1,192,478	+				-0.1
1,192,478	+				-0.5
1,192,479	-				+0.2
1,192,479	-				-0.1
1,192,541	+		ABZR87_RS05610	0.15	+0.5
1,192,541	+		ABZR87_RS05610	0.15	+2.6
1,192,541	+		ABZR87_RS05610	0.15	+1.6
1,192,541	+		ABZR87_RS05610	0.15	-1.4
1,192,541	+		ABZR87_RS05610	0.15	+0.0
1,192,541	+		ABZR87_RS05610	0.15	-0.6
1,192,541	+		ABZR87_RS05610	0.15	+1.6
1,192,541	+		ABZR87_RS05610	0.15	+0.1
1,192,541	+		ABZR87_RS05610	0.15	-1.3
1,192,541	+		ABZR87_RS05610	0.15	-0.1
1,192,542	-		ABZR87_RS05610	0.15	+0.8
1,192,542	-		ABZR87_RS05610	0.15	-1.0
1,192,542	-		ABZR87_RS05610	0.15	+0.6
1,192,542	-		ABZR87_RS05610	0.15	+1.9
1,192,542	-		ABZR87_RS05610	0.15	-1.7
1,192,542	-		ABZR87_RS05610	0.15	-1.6
1,192,542	-		ABZR87_RS05610	0.15	+0.0
1,192,542	-		ABZR87_RS05610	0.15	+1.8
1,192,542	-		ABZR87_RS05610	0.15	+0.4
1,192,622	+		ABZR87_RS05610	0.26	+0.6
1,192,622	+		ABZR87_RS05610	0.26	-0.5
1,192,622	+		ABZR87_RS05610	0.26	+0.3
1,192,682	+		ABZR87_RS05610	0.33	+0.0
1,192,683	-		ABZR87_RS05610	0.34	-0.8
1,192,683	-		ABZR87_RS05610	0.34	+0.1
1,192,683	-		ABZR87_RS05610	0.34	-1.2
1,192,744	+		ABZR87_RS05610	0.42	+0.8
1,192,744	+		ABZR87_RS05610	0.42	+1.6
1,192,744	+		ABZR87_RS05610	0.42	-0.4
1,192,744	+		ABZR87_RS05610	0.42	-0.4
1,192,744	+		ABZR87_RS05610	0.42	+0.3
1,192,744	+		ABZR87_RS05610	0.42	+0.9
1,192,744	+		ABZR87_RS05610	0.42	-1.9
1,192,745	-		ABZR87_RS05610	0.42	+0.7
1,192,745	-		ABZR87_RS05610	0.42	+0.1
1,192,745	-		ABZR87_RS05610	0.42	+0.0
1,192,745	-		ABZR87_RS05610	0.42	-1.3
1,192,745	-		ABZR87_RS05610	0.42	+0.5
1,192,745	-		ABZR87_RS05610	0.42	+0.6
1,192,745	-		ABZR87_RS05610	0.42	+0.8
1,192,793	+		ABZR87_RS05610	0.48	+0.4
1,192,793	+		ABZR87_RS05610	0.48	+0.4
1,192,794	-		ABZR87_RS05610	0.48	+0.3
1,192,794	-		ABZR87_RS05610	0.48	+0.6
1,192,794	-		ABZR87_RS05610	0.48	+0.3
1,192,794	-		ABZR87_RS05610	0.48	-0.9
1,192,794	-		ABZR87_RS05610	0.48	+0.2
1,192,810	+		ABZR87_RS05610	0.50	-1.1
1,192,811	-		ABZR87_RS05610	0.51	-0.2
1,192,883	+		ABZR87_RS05610	0.60	+1.2
1,192,883	+		ABZR87_RS05610	0.60	+0.1
1,192,884	-		ABZR87_RS05610	0.60	-0.8
1,192,884	-		ABZR87_RS05610	0.60	-1.6
1,192,914	-		ABZR87_RS05610	0.64	-0.5
1,193,232	+				-0.6
1,193,232	+				-0.4
1,193,232	+				-0.1
1,193,232	+				+0.7
1,193,232	+				+0.6
1,193,232	+				+1.0
1,193,232	+				+1.1
1,193,232	+				+1.8
1,193,233	-				-1.4
1,193,233	-				-0.6
1,193,267	+				+0.5
1,193,268	-				-0.2
1,193,268	-				-0.7
1,193,415	+		ABZR87_RS05615	0.19	-0.1
1,193,415	+		ABZR87_RS05615	0.19	-0.8
1,193,415	+		ABZR87_RS05615	0.19	-0.0
1,193,416	-		ABZR87_RS05615	0.20	-2.3
1,193,416	-		ABZR87_RS05615	0.20	-3.1
1,193,451	+		ABZR87_RS05615	0.25	-0.7
1,193,451	+		ABZR87_RS05615	0.25	-0.8
1,193,451	+		ABZR87_RS05615	0.25	+0.1
1,193,681	-		ABZR87_RS05615	0.63	+2.1
1,193,952	+				-2.3
1,193,952	+				-3.2
1,193,952	+				-3.1
1,193,953	-				+1.2
1,194,452	+				-0.0
1,194,455	+				-2.1
1,194,561	+				+0.8
1,194,561	+				-0.5
1,194,561	+				+0.4
1,194,561	+				+0.4
1,194,561	+				+0.9
1,194,561	+				+0.1
1,194,561	+				-0.4
1,194,561	+				-1.4
1,194,561	+				+0.3
1,194,561	+				-0.6
1,194,561	+				+1.0
1,194,561	+				-1.1
1,194,562	-				+3.6
1,194,562	-				-0.3
1,194,562	-				+0.5
1,194,562	-				+0.3
1,194,562	-				-1.0
1,194,562	-				+0.6
1,194,562	-				-1.3
1,194,562	-				-1.4
1,194,562	-				-1.9
1,194,562	-				+1.6
1,194,565	+				-0.6
1,194,565	+				-1.1
1,194,565	+				-2.1
1,194,565	+				-0.7
1,194,565	+				+0.8
1,194,565	+				+0.0
1,194,565	+				-0.3
1,194,565	+				-1.1
1,194,565	+				-0.5
1,194,565	+				+0.6
1,194,565	+				-1.2
1,194,566	+				-0.6
1,194,566	-				-0.7
1,194,566	-				+0.9
1,194,566	-				-0.2
1,194,566	-				-1.8
1,194,566	-				-0.2
1,194,566	-				+1.0
1,194,566	-				+0.8
1,194,566	-				-0.7
1,194,566	-				-0.6
1,194,566	-				-0.4
1,194,566	-				+0.4
1,194,566	-				-1.6
1,194,566	-				-0.0
1,194,566	-				+1.3
1,194,566	-				+0.3
1,194,566	-				-0.2
1,194,566	-				-1.6
1,194,566	-				-1.1
1,194,572	+				+0.6
1,194,624	+				+1.5
1,194,625	-				-0.4
1,194,633	-				-0.9
1,194,639	+				-2.5
1,194,727	+				-0.3
1,194,727	+				-0.0
1,194,727	+				-0.7
1,194,727	+				-0.5
1,194,727	+				-0.3
1,194,727	+				+0.7
1,194,727	+				-0.1
1,194,727	+				-0.7
1,194,727	+				-1.1
1,194,727	+				+0.0
1,194,728	-				-1.2
1,194,728	-				+1.2
1,194,728	-				-0.4
1,194,728	-				+0.3
1,194,728	-				-0.3
1,194,840	+		ABZR87_RS05625	0.19	+0.6
1,194,840	+		ABZR87_RS05625	0.19	+0.1
1,194,841	-		ABZR87_RS05625	0.19	+0.1
1,194,841	-		ABZR87_RS05625	0.19	+0.2