Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16735

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,830,707	-				-0.5
3,830,793	-				+0.3
3,830,806	+		HSERO_RS16730	0.16	+0.4
3,830,954	+		HSERO_RS16730	0.32	-0.0
3,831,024	+		HSERO_RS16730	0.40	+0.2
3,831,058	-		HSERO_RS16730	0.44	+0.8
3,831,266	-		HSERO_RS16730	0.68	+0.1
3,831,314	-		HSERO_RS16730	0.73	+0.3
3,831,427	-		HSERO_RS16730	0.86	+0.2
3,831,466	+				-0.4
3,831,553	-				+0.3
3,831,951	+		HSERO_RS16735	0.23	-0.2
3,831,954	-		HSERO_RS16735	0.23	+0.3
3,832,054	+		HSERO_RS16735	0.31	-0.1
3,832,067	-		HSERO_RS16735	0.32	-0.3
3,832,145	+		HSERO_RS16735	0.38	+1.4
3,832,148	-		HSERO_RS16735	0.38	+0.2
3,832,226	-		HSERO_RS16735	0.44	+0.2
3,832,253	-		HSERO_RS16735	0.46	+0.3
3,832,275	+		HSERO_RS16735	0.47	-0.6
3,832,290	+		HSERO_RS16735	0.49	+1.5
3,832,347	-		HSERO_RS16735	0.53	+1.4
3,832,622	-		HSERO_RS16735	0.73	+0.4
3,832,727	+		HSERO_RS16735	0.81	-0.2
3,832,807	-		HSERO_RS16735	0.87	-0.2
3,832,831	+		HSERO_RS16735	0.89	+0.6
3,832,977	+				+1.3
3,833,047	-				+0.9
3,833,087	-				-2.6
3,833,162	+		HSERO_RS16740	0.10	+0.6
3,833,177	+		HSERO_RS16740	0.11	-0.2
3,833,345	+		HSERO_RS16740	0.21	+0.0
3,833,409	-		HSERO_RS16740	0.24	+0.2
3,833,471	+		HSERO_RS16740	0.28	-0.3
3,833,841	-		HSERO_RS16740	0.48	+0.1
3,833,877	+		HSERO_RS16740	0.50	+0.0
3,833,935	+		HSERO_RS16740	0.54	+0.6
3,833,958	-		HSERO_RS16740	0.55	+0.9