Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16080

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,671,074	+				-0.6
3,671,094	+				+0.2
3,671,169	-				-0.7
3,671,524	+				+0.7
3,671,711	-		HSERO_RS16080	0.18	-0.6
3,671,763	-				+1.7
3,671,845	+		HSERO_RS16080	0.43	-0.6
3,671,924	-		HSERO_RS16080	0.57	+0.7
3,671,928	-		HSERO_RS16080	0.58	-0.1
3,671,932	+				+1.1
3,671,935	-		HSERO_RS16080	0.59	-0.8
3,671,964	-		HSERO_RS16080	0.64	+0.2
3,672,041	+		HSERO_RS16080	0.78	-1.3
3,672,135	+				+0.2
3,672,140	+				+0.7
3,672,147	-				+0.9
3,672,154	+				-0.1
3,672,162	-				+0.1
3,672,177	-				+0.0
3,672,232	+				-0.7
3,672,237	+				-0.6
3,672,237	+				-0.1
3,672,274	+		HSERO_RS16085	0.14	-0.1
3,672,331	+		HSERO_RS16085	0.20	-0.4
3,672,382	+		HSERO_RS16085	0.25	+0.2
3,672,385	-		HSERO_RS16085	0.26	+0.1
3,672,440	-		HSERO_RS16085	0.32	+0.3
3,672,553	+		HSERO_RS16085	0.44	-0.8
3,672,561	-		HSERO_RS16085	0.45	-0.0
3,672,563	+		HSERO_RS16085	0.45	+0.1
3,672,571	-		HSERO_RS16085	0.46	-0.0
3,672,773	+		HSERO_RS16085	0.68	-2.4
3,672,851	-		HSERO_RS16085	0.76	+1.3
3,672,862	-		HSERO_RS16085	0.77	+1.3
3,672,877	-		HSERO_RS16085	0.79	+0.0
3,672,955	-		HSERO_RS16085	0.87	+0.5
3,672,976	+		HSERO_RS16085	0.90	+0.2
3,672,976	+		HSERO_RS16085	0.90	-0.7
3,672,989	-				-0.4
3,672,995	+				-0.1
3,673,029	-				+0.5
3,673,036	+				-1.3
3,673,050	+				+0.0