Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12275

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,785,809	+				+0.2
2,785,913	-				+0.1
2,786,255	+		HSERO_RS12270	0.34	-0.2
2,786,370	+		HSERO_RS12270	0.51	+1.0
2,786,561	+		HSERO_RS12270	0.78	+0.4
2,786,626	-		HSERO_RS12270	0.87	-0.3
2,786,685	-				+0.2
2,786,781	+				-0.4
2,786,878	-		HSERO_RS12275	0.22	+1.3
2,786,881	-		HSERO_RS12275	0.22	+0.0
2,786,883	-		HSERO_RS12275	0.22	+0.5
2,786,977	-		HSERO_RS12275	0.35	+0.3
2,787,045	-				+1.5
2,787,210	-		HSERO_RS12275	0.65	-0.2
2,787,333	+		HSERO_RS12275	0.81	+0.2
2,787,333	+		HSERO_RS12275	0.81	+0.7
2,787,448	-				+0.1
2,787,534	-				+0.1
2,787,556	-				-0.8
2,787,864	-		HSERO_RS12280	0.21	-0.2
2,788,099	-		HSERO_RS12280	0.33	+0.3
2,788,373	-		HSERO_RS12280	0.48	-0.3