Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS01605

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
354,755	+				-0.5
354,857	-				+0.3
355,108	-				-0.3
355,111	+		HSERO_RS01600	0.43	-0.5
355,124	+		HSERO_RS01600	0.45	+0.8
355,178	+		HSERO_RS01600	0.52	-0.5
355,497	-				-0.4
355,552	+				+0.2
355,557	+				+0.5
355,859	+		HSERO_RS01605	0.19	-0.7
356,070	+		HSERO_RS01605	0.35	-0.1
356,384	+		HSERO_RS01605	0.60	+1.2
356,451	-		HSERO_RS01605	0.65	-0.8
356,504	-		HSERO_RS01605	0.70	-0.2
356,514	-		HSERO_RS01605	0.70	+0.1
356,525	-		HSERO_RS01605	0.71	-1.4
356,742	-		HSERO_RS01605	0.88	-1.5
356,765	-				-0.5
356,914	-				+0.5
357,042	+				-0.3
357,403	-				-0.2
357,419	+				-0.6
357,479	-				+0.2
357,546	+				+1.3