Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00040 and HSERO_RS00045 are separated by 107 nucleotides HSERO_RS00045 and HSERO_RS00050 are separated by 203 nucleotides
HSERO_RS00040: HSERO_RS00040 - hypothetical protein, at 14,022 to 14,987
_RS00040
HSERO_RS00045: HSERO_RS00045 - hypothetical protein, at 15,095 to 16,108
_RS00045
HSERO_RS00050: HSERO_RS00050 - membrane protein, at 16,312 to 17,625
_RS00050
Position (kb) 15
16
17 Strain fitness (log2 ratio) -1
0
1
2 at 14.102 kb on - strand at 14.126 kb on - strand, within HSERO_RS00040 at 14.278 kb on + strand, within HSERO_RS00040 at 14.342 kb on + strand, within HSERO_RS00040 at 14.342 kb on + strand, within HSERO_RS00040 at 14.640 kb on - strand, within HSERO_RS00040 at 14.736 kb on + strand, within HSERO_RS00040 at 14.783 kb on + strand, within HSERO_RS00040 at 14.791 kb on - strand, within HSERO_RS00040 at 14.879 kb on + strand, within HSERO_RS00040 at 14.928 kb on - strand at 15.052 kb on - strand at 15.059 kb on - strand at 15.062 kb on - strand at 15.119 kb on - strand at 15.160 kb on - strand at 15.253 kb on - strand, within HSERO_RS00045 at 15.333 kb on + strand, within HSERO_RS00045 at 15.413 kb on + strand, within HSERO_RS00045 at 15.421 kb on - strand, within HSERO_RS00045 at 15.421 kb on - strand, within HSERO_RS00045 at 15.718 kb on - strand, within HSERO_RS00045 at 15.851 kb on + strand, within HSERO_RS00045 at 15.962 kb on - strand, within HSERO_RS00045 at 15.971 kb on - strand, within HSERO_RS00045 at 15.994 kb on + strand, within HSERO_RS00045 at 16.276 kb on + strand at 16.390 kb on - strand at 16.519 kb on - strand, within HSERO_RS00050 at 16.543 kb on + strand, within HSERO_RS00050 at 16.580 kb on + strand at 16.639 kb on + strand, within HSERO_RS00050 at 16.669 kb on + strand, within HSERO_RS00050 at 16.720 kb on - strand, within HSERO_RS00050 at 16.822 kb on - strand, within HSERO_RS00050 at 16.843 kb on + strand, within HSERO_RS00050 at 16.843 kb on + strand, within HSERO_RS00050 at 16.885 kb on - strand, within HSERO_RS00050 at 16.914 kb on - strand, within HSERO_RS00050 at 16.962 kb on + strand, within HSERO_RS00050 at 16.962 kb on + strand, within HSERO_RS00050 at 17.048 kb on + strand, within HSERO_RS00050
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM remove 14,102 - -0.2 14,126 - HSERO_RS00040 0.11 -0.0 14,278 + HSERO_RS00040 0.27 +0.5 14,342 + HSERO_RS00040 0.33 +0.8 14,342 + HSERO_RS00040 0.33 -0.1 14,640 - HSERO_RS00040 0.64 -0.4 14,736 + HSERO_RS00040 0.74 -0.0 14,783 + HSERO_RS00040 0.79 +0.8 14,791 - HSERO_RS00040 0.80 -0.1 14,879 + HSERO_RS00040 0.89 -0.3 14,928 - -0.1 15,052 - +0.4 15,059 - -0.1 15,062 - +0.7 15,119 - -0.5 15,160 - +0.4 15,253 - HSERO_RS00045 0.16 -0.0 15,333 + HSERO_RS00045 0.23 +0.2 15,413 + HSERO_RS00045 0.31 +0.3 15,421 - HSERO_RS00045 0.32 -0.1 15,421 - HSERO_RS00045 0.32 -0.4 15,718 - HSERO_RS00045 0.61 -0.8 15,851 + HSERO_RS00045 0.75 +0.7 15,962 - HSERO_RS00045 0.86 -1.3 15,971 - HSERO_RS00045 0.86 -0.6 15,994 + HSERO_RS00045 0.89 -0.5 16,276 + -0.1 16,390 - +0.6 16,519 - HSERO_RS00050 0.16 +2.0 16,543 + HSERO_RS00050 0.18 -0.4 16,580 + +1.8 16,639 + HSERO_RS00050 0.25 -0.1 16,669 + HSERO_RS00050 0.27 -0.3 16,720 - HSERO_RS00050 0.31 -0.3 16,822 - HSERO_RS00050 0.39 +0.8 16,843 + HSERO_RS00050 0.40 -0.1 16,843 + HSERO_RS00050 0.40 -0.2 16,885 - HSERO_RS00050 0.44 +0.2 16,914 - HSERO_RS00050 0.46 -0.2 16,962 + HSERO_RS00050 0.49 -0.9 16,962 + HSERO_RS00050 0.49 -1.4 17,048 + HSERO_RS00050 0.56 +0.6
Or see this region's nucleotide sequence