Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00035 and HSERO_RS00040 are separated by 260 nucleotides HSERO_RS00040 and HSERO_RS00045 are separated by 107 nucleotides
HSERO_RS00035: HSERO_RS00035 - 4-aminobutyrate aminotransferase, at 12,433 to 13,761
_RS00035
HSERO_RS00040: HSERO_RS00040 - hypothetical protein, at 14,022 to 14,987
_RS00040
HSERO_RS00045: HSERO_RS00045 - hypothetical protein, at 15,095 to 16,108
_RS00045
Position (kb) 14
15 Strain fitness (log2 ratio) -1
0
1
2 at 13.159 kb on - strand, within HSERO_RS00035 at 13.285 kb on - strand, within HSERO_RS00035 at 13.328 kb on + strand, within HSERO_RS00035 at 13.418 kb on + strand, within HSERO_RS00035 at 13.441 kb on + strand, within HSERO_RS00035 at 13.451 kb on + strand, within HSERO_RS00035 at 13.459 kb on - strand, within HSERO_RS00035 at 13.758 kb on - strand at 13.767 kb on + strand at 13.772 kb on + strand at 13.775 kb on - strand at 13.871 kb on + strand at 14.007 kb on - strand at 14.094 kb on + strand at 14.102 kb on - strand at 14.126 kb on - strand, within HSERO_RS00040 at 14.278 kb on + strand, within HSERO_RS00040 at 14.342 kb on + strand, within HSERO_RS00040 at 14.342 kb on + strand, within HSERO_RS00040 at 14.640 kb on - strand, within HSERO_RS00040 at 14.736 kb on + strand, within HSERO_RS00040 at 14.783 kb on + strand, within HSERO_RS00040 at 14.791 kb on - strand, within HSERO_RS00040 at 14.879 kb on + strand, within HSERO_RS00040 at 14.928 kb on - strand at 15.052 kb on - strand at 15.059 kb on - strand at 15.062 kb on - strand at 15.119 kb on - strand at 15.160 kb on - strand at 15.253 kb on - strand, within HSERO_RS00045 at 15.333 kb on + strand, within HSERO_RS00045 at 15.413 kb on + strand, within HSERO_RS00045 at 15.421 kb on - strand, within HSERO_RS00045 at 15.421 kb on - strand, within HSERO_RS00045 at 15.718 kb on - strand, within HSERO_RS00045 at 15.851 kb on + strand, within HSERO_RS00045 at 15.962 kb on - strand, within HSERO_RS00045 at 15.971 kb on - strand, within HSERO_RS00045
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM remove 13,159 - HSERO_RS00035 0.55 -0.5 13,285 - HSERO_RS00035 0.64 +0.1 13,328 + HSERO_RS00035 0.67 -0.4 13,418 + HSERO_RS00035 0.74 -1.3 13,441 + HSERO_RS00035 0.76 -0.7 13,451 + HSERO_RS00035 0.77 -0.1 13,459 - HSERO_RS00035 0.77 -0.8 13,758 - +0.5 13,767 + +1.8 13,772 + -0.4 13,775 - -0.2 13,871 + +0.4 14,007 - -0.1 14,094 + +0.0 14,102 - -0.2 14,126 - HSERO_RS00040 0.11 -0.0 14,278 + HSERO_RS00040 0.27 +0.5 14,342 + HSERO_RS00040 0.33 +0.8 14,342 + HSERO_RS00040 0.33 -0.1 14,640 - HSERO_RS00040 0.64 -0.4 14,736 + HSERO_RS00040 0.74 -0.0 14,783 + HSERO_RS00040 0.79 +0.8 14,791 - HSERO_RS00040 0.80 -0.1 14,879 + HSERO_RS00040 0.89 -0.3 14,928 - -0.1 15,052 - +0.4 15,059 - -0.1 15,062 - +0.7 15,119 - -0.5 15,160 - +0.4 15,253 - HSERO_RS00045 0.16 -0.0 15,333 + HSERO_RS00045 0.23 +0.2 15,413 + HSERO_RS00045 0.31 +0.3 15,421 - HSERO_RS00045 0.32 -0.1 15,421 - HSERO_RS00045 0.32 -0.4 15,718 - HSERO_RS00045 0.61 -0.8 15,851 + HSERO_RS00045 0.75 +0.7 15,962 - HSERO_RS00045 0.86 -1.3 15,971 - HSERO_RS00045 0.86 -0.6
Or see this region's nucleotide sequence