Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26175 and BWI76_RS26180 are separated by 19 nucleotides BWI76_RS26180 and BWI76_RS26185 are separated by 59 nucleotides BWI76_RS26185 and BWI76_RS26190 are separated by 212 nucleotides
BWI76_RS26175: BWI76_RS26175 - DeoR/GlpR family transcriptional regulator, at 5,413,221 to 5,413,979
_RS26175
BWI76_RS26180: BWI76_RS26180 - rhomboid family intramembrane serine protease GlpG, at 5,413,999 to 5,414,829
_RS26180
BWI76_RS26185: BWI76_RS26185 - thiosulfate sulfurtransferase, at 5,414,889 to 5,415,218
_RS26185
BWI76_RS26190: BWI76_RS26190 - glycerol-3-phosphate dehydrogenase, at 5,415,431 to 5,416,939
_RS26190
Position (kb) 5414
5415
5416 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5414.067 kb on + strand at 5414.137 kb on - strand, within BWI76_RS26180 at 5414.249 kb on + strand, within BWI76_RS26180 at 5414.270 kb on + strand, within BWI76_RS26180 at 5414.384 kb on - strand, within BWI76_RS26180 at 5414.395 kb on + strand, within BWI76_RS26180 at 5414.395 kb on + strand, within BWI76_RS26180 at 5414.447 kb on + strand, within BWI76_RS26180 at 5414.608 kb on + strand, within BWI76_RS26180 at 5414.785 kb on + strand at 5414.793 kb on - strand at 5414.886 kb on + strand at 5414.964 kb on - strand, within BWI76_RS26185 at 5415.134 kb on - strand, within BWI76_RS26185 at 5415.210 kb on - strand at 5415.280 kb on + strand at 5415.322 kb on - strand at 5415.341 kb on + strand at 5415.506 kb on + strand at 5415.564 kb on + strand at 5415.624 kb on + strand, within BWI76_RS26190 at 5415.748 kb on - strand, within BWI76_RS26190 at 5416.162 kb on + strand, within BWI76_RS26190 at 5416.170 kb on - strand, within BWI76_RS26190
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml remove 5,414,067 + +0.6 5,414,137 - BWI76_RS26180 0.17 -0.5 5,414,249 + BWI76_RS26180 0.30 -0.6 5,414,270 + BWI76_RS26180 0.33 +1.2 5,414,384 - BWI76_RS26180 0.46 +0.1 5,414,395 + BWI76_RS26180 0.48 +0.3 5,414,395 + BWI76_RS26180 0.48 +1.0 5,414,447 + BWI76_RS26180 0.54 -1.2 5,414,608 + BWI76_RS26180 0.73 +1.7 5,414,785 + +3.8 5,414,793 - -1.8 5,414,886 + +0.2 5,414,964 - BWI76_RS26185 0.23 -0.9 5,415,134 - BWI76_RS26185 0.74 -1.2 5,415,210 - -0.6 5,415,280 + -0.6 5,415,322 - +0.1 5,415,341 + +1.3 5,415,506 + -1.5 5,415,564 + -0.0 5,415,624 + BWI76_RS26190 0.13 -1.2 5,415,748 - BWI76_RS26190 0.21 -0.6 5,416,162 + BWI76_RS26190 0.48 +0.8 5,416,170 - BWI76_RS26190 0.49 -0.8
Or see this region's nucleotide sequence