Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25930 and BWI76_RS25935 overlap by 14 nucleotides BWI76_RS25935 and BWI76_RS25940 overlap by 80 nucleotides BWI76_RS25940 and BWI76_RS25945 are separated by 21 nucleotides BWI76_RS25945 and BWI76_RS25950 are separated by 61 nucleotides
BWI76_RS25930: BWI76_RS25930 - glutathione-regulated potassium-efflux system protein KefB, at 5,360,341 to 5,362,146
_RS25930
BWI76_RS25935: BWI76_RS25935 - glutathione-regulated potassium-efflux system ancillary protein KefG, at 5,362,133 to 5,362,693
_RS25935
BWI76_RS25940: BWI76_RS25940 - hypothetical protein, at 5,362,614 to 5,362,847
_RS25940
BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773
_RS25945
BWI76_RS25950: BWI76_RS25950 - nicotinate phosphoribosyltransferase, at 5,364,835 to 5,366,325
_RS25950
Position (kb) 5362
5363
5364
5365 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5361.932 kb on - strand, within BWI76_RS25930 at 5362.003 kb on + strand at 5362.211 kb on + strand, within BWI76_RS25935 at 5362.438 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.927 kb on - strand at 5362.937 kb on + strand at 5363.187 kb on + strand, within BWI76_RS25945 at 5363.678 kb on + strand, within BWI76_RS25945 at 5363.827 kb on - strand, within BWI76_RS25945 at 5364.492 kb on - strand, within BWI76_RS25945 at 5364.690 kb on + strand at 5364.703 kb on + strand at 5364.736 kb on + strand at 5364.841 kb on - strand at 5364.876 kb on + strand at 5364.884 kb on - strand at 5364.944 kb on - strand at 5365.072 kb on - strand, within BWI76_RS25950 at 5365.128 kb on - strand, within BWI76_RS25950 at 5365.288 kb on + strand, within BWI76_RS25950 at 5365.408 kb on + strand, within BWI76_RS25950 at 5365.416 kb on - strand, within BWI76_RS25950 at 5365.686 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.732 kb on - strand, within BWI76_RS25950
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml remove 5,361,932 - BWI76_RS25930 0.88 -0.3 5,362,003 + +3.9 5,362,211 + BWI76_RS25935 0.14 +0.7 5,362,438 - BWI76_RS25935 0.54 +1.4 5,362,480 - BWI76_RS25935 0.62 -0.0 5,362,480 - BWI76_RS25935 0.62 +2.2 5,362,927 - +0.6 5,362,937 + -1.2 5,363,187 + BWI76_RS25945 0.17 -1.0 5,363,678 + BWI76_RS25945 0.42 -0.7 5,363,827 - BWI76_RS25945 0.50 -0.0 5,364,492 - BWI76_RS25945 0.85 -1.0 5,364,690 + +0.1 5,364,703 + -0.0 5,364,736 + -1.9 5,364,841 - +0.7 5,364,876 + +1.4 5,364,884 - -0.5 5,364,944 - +1.7 5,365,072 - BWI76_RS25950 0.16 -0.0 5,365,128 - BWI76_RS25950 0.20 +0.3 5,365,288 + BWI76_RS25950 0.30 +0.7 5,365,408 + BWI76_RS25950 0.38 +0.1 5,365,416 - BWI76_RS25950 0.39 +0.4 5,365,686 + BWI76_RS25950 0.57 +0.8 5,365,724 + BWI76_RS25950 0.60 +0.4 5,365,724 + BWI76_RS25950 0.60 +0.2 5,365,727 - BWI76_RS25950 0.60 +0.0 5,365,727 - BWI76_RS25950 0.60 +0.6 5,365,732 - BWI76_RS25950 0.60 -0.6
Or see this region's nucleotide sequence