Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22520 and BWI76_RS22525 overlap by 14 nucleotides BWI76_RS22525 and BWI76_RS22530 overlap by 4 nucleotides
BWI76_RS22520: BWI76_RS22520 - 3-oxoacyl-ACP synthase, at 4,693,479 to 4,694,732
_RS22520
BWI76_RS22525: BWI76_RS22525 - cation efflux system protein, at 4,694,719 to 4,696,116
_RS22525
BWI76_RS22530: BWI76_RS22530 - macrolide ABC transporter permease/ATP-binding protein MacB, at 4,696,113 to 4,698,056
_RS22530
Position (kb)
4694
4695
4696
4697 Strain fitness (log2 ratio)
-1
0
1
2 at 4694.002 kb on - strand, within BWI76_RS22520 at 4694.115 kb on + strand, within BWI76_RS22520 at 4694.384 kb on - strand, within BWI76_RS22520 at 4694.547 kb on - strand, within BWI76_RS22520 at 4694.830 kb on - strand at 4694.860 kb on + strand, within BWI76_RS22525 at 4695.064 kb on + strand, within BWI76_RS22525 at 4695.072 kb on - strand, within BWI76_RS22525 at 4695.077 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.352 kb on + strand, within BWI76_RS22525 at 4695.426 kb on + strand, within BWI76_RS22525 at 4695.610 kb on - strand, within BWI76_RS22525 at 4695.655 kb on - strand, within BWI76_RS22525 at 4695.813 kb on - strand, within BWI76_RS22525 at 4695.832 kb on + strand, within BWI76_RS22525 at 4695.864 kb on + strand, within BWI76_RS22525 at 4695.870 kb on + strand, within BWI76_RS22525 at 4695.870 kb on + strand, within BWI76_RS22525 at 4696.110 kb on - strand at 4696.246 kb on - strand at 4696.251 kb on - strand at 4696.279 kb on - strand at 4696.491 kb on - strand, within BWI76_RS22530 at 4696.530 kb on - strand, within BWI76_RS22530 at 4696.530 kb on - strand, within BWI76_RS22530 at 4696.904 kb on - strand, within BWI76_RS22530
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml remove 4,694,002 - BWI76_RS22520 0.42 -1.0 4,694,115 + BWI76_RS22520 0.51 +1.2 4,694,384 - BWI76_RS22520 0.72 +0.4 4,694,547 - BWI76_RS22520 0.85 +0.7 4,694,830 - +1.0 4,694,860 + BWI76_RS22525 0.10 +0.0 4,695,064 + BWI76_RS22525 0.25 +0.2 4,695,072 - BWI76_RS22525 0.25 -0.0 4,695,077 - BWI76_RS22525 0.26 -1.5 4,695,087 - BWI76_RS22525 0.26 +0.2 4,695,087 - BWI76_RS22525 0.26 +0.0 4,695,087 - BWI76_RS22525 0.26 -0.7 4,695,352 + BWI76_RS22525 0.45 +0.1 4,695,426 + BWI76_RS22525 0.51 -0.4 4,695,610 - BWI76_RS22525 0.64 +0.5 4,695,655 - BWI76_RS22525 0.67 +0.2 4,695,813 - BWI76_RS22525 0.78 -0.1 4,695,832 + BWI76_RS22525 0.80 -0.1 4,695,864 + BWI76_RS22525 0.82 -0.7 4,695,870 + BWI76_RS22525 0.82 -0.3 4,695,870 + BWI76_RS22525 0.82 -0.9 4,696,110 - +0.7 4,696,246 - -0.3 4,696,251 - -0.0 4,696,279 - -0.5 4,696,491 - BWI76_RS22530 0.19 +0.5 4,696,530 - BWI76_RS22530 0.21 -1.2 4,696,530 - BWI76_RS22530 0.21 +2.0 4,696,904 - BWI76_RS22530 0.41 -0.7
Or see this region's nucleotide sequence