Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20460 and BWI76_RS20465 are separated by 160 nucleotides BWI76_RS20465 and BWI76_RS20470 are separated by 372 nucleotides BWI76_RS20470 and BWI76_RS20475 are separated by 62 nucleotides
BWI76_RS20460: BWI76_RS20460 - acetyl-CoA C-acyltransferase FadI, at 4,282,960 to 4,284,270
_RS20460
BWI76_RS20465: BWI76_RS20465 - hypothetical protein, at 4,284,431 to 4,284,715
_RS20465
BWI76_RS20470: BWI76_RS20470 - long-chain fatty acid transporter, at 4,285,088 to 4,286,452
_RS20470
BWI76_RS20475: BWI76_RS20475 - phospholipid-binding lipoprotein MlaA, at 4,286,515 to 4,287,276
_RS20475
Position (kb)
4285
4286
4287 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4284.142 kb on + strand at 4284.172 kb on + strand at 4284.220 kb on - strand at 4284.263 kb on - strand at 4284.280 kb on + strand at 4284.401 kb on - strand at 4284.496 kb on + strand, within BWI76_RS20465 at 4284.509 kb on + strand, within BWI76_RS20465 at 4284.525 kb on - strand, within BWI76_RS20465 at 4284.532 kb on - strand at 4284.675 kb on - strand, within BWI76_RS20465 at 4284.694 kb on + strand at 4284.704 kb on + strand at 4284.704 kb on + strand at 4284.965 kb on + strand at 4284.978 kb on - strand at 4284.980 kb on - strand at 4284.997 kb on - strand at 4285.024 kb on - strand at 4285.156 kb on - strand at 4285.156 kb on - strand at 4285.161 kb on - strand at 4285.328 kb on - strand, within BWI76_RS20470 at 4285.397 kb on - strand, within BWI76_RS20470 at 4285.936 kb on - strand, within BWI76_RS20470 at 4285.936 kb on - strand, within BWI76_RS20470 at 4286.048 kb on + strand, within BWI76_RS20470 at 4286.057 kb on + strand, within BWI76_RS20470 at 4286.161 kb on - strand, within BWI76_RS20470 at 4286.189 kb on - strand, within BWI76_RS20470 at 4286.558 kb on + strand at 4286.807 kb on - strand, within BWI76_RS20475 at 4287.003 kb on + strand, within BWI76_RS20475 at 4287.101 kb on + strand, within BWI76_RS20475 at 4287.126 kb on - strand, within BWI76_RS20475 at 4287.163 kb on + strand, within BWI76_RS20475
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml remove 4,284,142 + -0.2 4,284,172 + -0.6 4,284,220 - +0.5 4,284,263 - -0.6 4,284,280 + -0.1 4,284,401 - -0.2 4,284,496 + BWI76_RS20465 0.23 -0.2 4,284,509 + BWI76_RS20465 0.27 +0.1 4,284,525 - BWI76_RS20465 0.33 +2.2 4,284,532 - +0.5 4,284,675 - BWI76_RS20465 0.86 -0.6 4,284,694 + -1.2 4,284,704 + +1.8 4,284,704 + -0.1 4,284,965 + -0.0 4,284,978 - +2.3 4,284,980 - -0.6 4,284,997 - -0.7 4,285,024 - -0.8 4,285,156 - -0.5 4,285,156 - -0.7 4,285,161 - -0.9 4,285,328 - BWI76_RS20470 0.18 -1.7 4,285,397 - BWI76_RS20470 0.23 -0.3 4,285,936 - BWI76_RS20470 0.62 -2.1 4,285,936 - BWI76_RS20470 0.62 +0.5 4,286,048 + BWI76_RS20470 0.70 -1.2 4,286,057 + BWI76_RS20470 0.71 -0.2 4,286,161 - BWI76_RS20470 0.79 -0.1 4,286,189 - BWI76_RS20470 0.81 -0.5 4,286,558 + -0.4 4,286,807 - BWI76_RS20475 0.38 -0.9 4,287,003 + BWI76_RS20475 0.64 -0.2 4,287,101 + BWI76_RS20475 0.77 -0.6 4,287,126 - BWI76_RS20475 0.80 -1.1 4,287,163 + BWI76_RS20475 0.85 -0.5
Or see this region's nucleotide sequence