Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18270
Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,796,369 | - | BWI76_RS18265 | 0.40 | -1.1 | |
3,796,439 | + | BWI76_RS18265 | 0.44 | -0.1 | |
3,796,442 | - | BWI76_RS18265 | 0.45 | +0.1 | |
3,796,606 | + | BWI76_RS18265 | 0.55 | -0.1 | |
3,796,661 | - | BWI76_RS18265 | 0.59 | -1.4 | |
3,796,731 | + | BWI76_RS18265 | 0.63 | -0.2 | |
3,796,736 | + | BWI76_RS18265 | 0.63 | -1.5 | |
3,796,739 | - | BWI76_RS18265 | 0.64 | +0.7 | |
3,796,739 | - | BWI76_RS18265 | 0.64 | -0.1 | |
3,796,739 | - | BWI76_RS18265 | 0.64 | -0.3 | |
3,796,835 | + | BWI76_RS18265 | 0.70 | -0.3 | |
3,797,154 | + | -0.1 | |||
3,797,431 | + | BWI76_RS18270 | 0.31 | -1.3 | |
3,797,761 | + | -0.1 | |||
3,797,922 | + | -0.5 | |||
3,797,922 | + | +0.1 | |||
3,797,925 | - | +0.2 | |||
3,797,925 | - | +0.8 | |||
3,797,930 | - | -1.6 | |||
3,797,949 | - | -0.2 | |||
3,798,093 | - | -0.3 | |||
3,798,299 | - | BWI76_RS18275 | 0.23 | +1.3 | |
3,798,398 | + | BWI76_RS18275 | 0.30 | -0.4 | |
3,798,403 | + | +3.8 | |||
3,798,411 | - | BWI76_RS18275 | 0.30 | -1.7 | |
3,798,562 | + | BWI76_RS18275 | 0.41 | -0.8 | |
3,798,570 | - | BWI76_RS18275 | 0.42 | -0.4 |
Or see this region's nucleotide sequence