Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11360
Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,393,352 | - | BWI76_RS11355 | 0.44 | +0.7 | |
2,393,354 | + | BWI76_RS11355 | 0.44 | -0.2 | |
2,393,362 | + | BWI76_RS11355 | 0.44 | -0.7 | |
2,393,362 | + | BWI76_RS11355 | 0.44 | -1.5 | |
2,393,535 | + | BWI76_RS11355 | 0.59 | -0.5 | |
2,393,543 | - | BWI76_RS11355 | 0.60 | -0.6 | |
2,393,679 | - | BWI76_RS11355 | 0.71 | +0.8 | |
2,393,776 | + | BWI76_RS11355 | 0.79 | -0.7 | |
2,393,898 | + | BWI76_RS11355 | 0.89 | +1.6 | |
2,393,898 | + | BWI76_RS11355 | 0.89 | -0.2 | |
2,393,932 | - | -0.8 | |||
2,393,953 | - | -0.2 | |||
2,394,058 | - | -0.6 | |||
2,394,092 | - | +1.2 | |||
2,394,128 | - | -0.6 | |||
2,394,143 | + | +0.6 | |||
2,394,166 | + | +2.5 | |||
2,394,477 | + | BWI76_RS11360 | 0.17 | -0.8 | |
2,394,477 | + | BWI76_RS11360 | 0.17 | -1.1 | |
2,394,485 | - | BWI76_RS11360 | 0.18 | -0.1 | |
2,394,498 | + | BWI76_RS11360 | 0.19 | +0.2 | |
2,394,598 | - | BWI76_RS11360 | 0.28 | -0.8 | |
2,395,329 | + | -1.3 | |||
2,395,541 | + | BWI76_RS11365 | 0.21 | -0.1 | |
2,395,551 | + | BWI76_RS11365 | 0.22 | -0.3 | |
2,395,784 | - | BWI76_RS11365 | 0.52 | -1.1 | |
2,396,128 | - | +1.3 | |||
2,396,177 | + | +0.3 | |||
2,396,210 | + | -0.9 |
Or see this region's nucleotide sequence