Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09165
Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,935,331 | + | BWI76_RS09160 | 0.28 | +0.3 | |
1,935,341 | - | BWI76_RS09160 | 0.29 | -0.5 | |
1,935,341 | - | BWI76_RS09160 | 0.29 | +0.3 | |
1,935,394 | + | BWI76_RS09160 | 0.33 | +0.4 | |
1,936,073 | - | BWI76_RS09160 | 0.88 | +0.5 | |
1,936,299 | - | +1.5 | |||
1,936,360 | + | BWI76_RS09165 | 0.11 | +0.7 | |
1,936,463 | - | BWI76_RS09165 | 0.24 | +2.8 | |
1,936,472 | + | BWI76_RS09165 | 0.25 | +0.0 | |
1,936,479 | - | BWI76_RS09165 | 0.26 | +1.4 | |
1,936,535 | + | +2.0 | |||
1,936,543 | - | BWI76_RS09165 | 0.33 | -0.1 | |
1,936,922 | - | BWI76_RS09165 | 0.80 | +1.8 | |
1,937,081 | - | +0.7 | |||
1,937,470 | - | BWI76_RS09170 | 0.32 | -0.6 | |
1,937,500 | - | BWI76_RS09170 | 0.34 | +0.5 | |
1,937,540 | + | BWI76_RS09170 | 0.38 | +0.4 | |
1,937,792 | + | BWI76_RS09170 | 0.59 | +0.3 | |
1,937,837 | + | BWI76_RS09170 | 0.63 | -0.3 | |
1,937,905 | + | BWI76_RS09170 | 0.68 | +0.1 | |
1,938,009 | - | BWI76_RS09170 | 0.77 | -0.9 |
Or see this region's nucleotide sequence