Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00040

Experiment: Chloramphenicol 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00025 and BWI76_RS00030 are separated by 111 nucleotidesBWI76_RS00030 and BWI76_RS00035 are separated by 15 nucleotidesBWI76_RS00035 and BWI76_RS00040 overlap by 37 nucleotidesBWI76_RS00040 and BWI76_RS00045 are separated by 2 nucleotides BWI76_RS00025: BWI76_RS00025 - hypothetical protein, at 6,483 to 6,673 _RS00025 BWI76_RS00030: BWI76_RS00030 - 50S ribosomal protein L34, at 6,785 to 6,925 _RS00030 BWI76_RS00035: BWI76_RS00035 - ribonuclease P protein component, at 6,941 to 7,300 _RS00035 BWI76_RS00040: BWI76_RS00040 - membrane protein insertion efficiency factor YidD, at 7,264 to 7,521 _RS00040 BWI76_RS00045: BWI76_RS00045 - membrane protein insertase YidC, at 7,524 to 9,170 _RS00045 Position (kb) 7 8Strain fitness (log2 ratio) -1 0 1 2 3at 6.437 kb on - strandat 6.451 kb on - strandat 6.451 kb on - strandat 6.507 kb on - strand, within BWI76_RS00025at 7.403 kb on + strand, within BWI76_RS00040

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Per-strain Table

Position Strand Gene LocusTag Fraction Chloramphenicol 0.001 mg/ml
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6,437 - +1.7
6,451 - +0.2
6,451 - -0.4
6,507 - BWI76_RS00025 0.13 +2.8
7,403 + BWI76_RS00040 0.54 -0.4

Or see this region's nucleotide sequence