Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16855

Experiment: Minimal media pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH7
3,798,907	+		AO356_16850	0.32	-1.4
3,798,907	+		AO356_16850	0.32	-1.2
3,798,988	+		AO356_16850	0.39	-1.4
3,798,988	+		AO356_16850	0.39	-0.4
3,798,988	+		AO356_16850	0.39	+0.4
3,798,989	-		AO356_16850	0.39	-0.6
3,799,025	-		AO356_16850	0.42	-0.0
3,799,121	-		AO356_16850	0.50	-0.8
3,799,121	-		AO356_16850	0.50	-1.2
3,799,121	-		AO356_16850	0.50	-1.0
3,799,147	+		AO356_16850	0.52	-1.7
3,799,147	+		AO356_16850	0.52	-0.2
3,799,147	+		AO356_16850	0.52	-0.9
3,799,147	+		AO356_16850	0.52	-0.8
3,799,148	-		AO356_16850	0.52	-2.3
3,799,172	-		AO356_16850	0.54	-0.3
3,799,228	+		AO356_16850	0.58	-0.9
3,799,294	+		AO356_16850	0.64	-2.6
3,799,295	-		AO356_16850	0.64	-0.9
3,799,295	-		AO356_16850	0.64	-0.8
3,799,328	-		AO356_16850	0.66	-0.9
3,799,328	-		AO356_16850	0.66	-2.0
3,799,492	+		AO356_16850	0.79	+0.1
3,799,492	+		AO356_16850	0.79	-1.2
3,799,492	+		AO356_16850	0.79	-0.3
3,799,492	+		AO356_16850	0.79	-1.5
3,799,492	+		AO356_16850	0.79	+1.9
3,799,492	+		AO356_16850	0.79	-0.1
3,799,493	-		AO356_16850	0.80	-3.3
3,799,570	+		AO356_16850	0.86	-1.9
3,799,571	-		AO356_16850	0.86	-1.0
3,799,571	-		AO356_16850	0.86	-0.1
3,799,598	-		AO356_16850	0.88	-0.8
3,799,598	-		AO356_16850	0.88	-2.0
3,799,648	+				-0.6
3,799,649	-				-1.2
3,799,649	-				-0.8
3,799,649	-				-0.4
3,799,759	+				+0.0
3,799,759	+				-2.7
3,799,760	-				-0.9
3,799,763	+				-0.7
3,799,763	+				-0.1
3,799,763	+				-2.7
3,799,763	+				-1.2
3,799,763	+				-2.7
3,799,764	-				+0.7
3,799,764	-				-1.4
3,799,764	-				+0.8
3,799,915	+		AO356_16855	0.13	-0.3
3,799,915	+		AO356_16855	0.13	-2.6
3,800,164	+		AO356_16855	0.32	-0.9
3,800,165	-		AO356_16855	0.32	+0.5
3,800,165	-		AO356_16855	0.32	-0.4
3,800,210	+		AO356_16855	0.36	+0.1
3,800,210	+		AO356_16855	0.36	-1.9
3,800,211	-		AO356_16855	0.36	+0.7
3,800,211	-		AO356_16855	0.36	+0.4
3,800,254	+		AO356_16855	0.40	-0.1
3,800,254	+		AO356_16855	0.40	-2.0
3,800,368	+		AO356_16855	0.49	-1.0
3,800,368	+		AO356_16855	0.49	-1.2
3,800,369	-		AO356_16855	0.49	+0.7
3,800,395	+		AO356_16855	0.51	+0.3
3,800,446	+		AO356_16855	0.55	-0.2
3,800,447	-		AO356_16855	0.55	+1.1
3,800,447	-		AO356_16855	0.55	+0.8
3,800,447	-		AO356_16855	0.55	+0.5
3,800,447	-		AO356_16855	0.55	+0.7
3,800,480	-		AO356_16855	0.58	-0.7
3,800,527	+		AO356_16855	0.61	-0.4
3,800,527	+		AO356_16855	0.61	+0.5
3,800,527	+		AO356_16855	0.61	-0.9
3,800,527	+		AO356_16855	0.61	-0.4
3,800,527	+		AO356_16855	0.61	-0.9
3,800,528	-		AO356_16855	0.61	+0.3
3,800,528	-		AO356_16855	0.61	+0.1
3,800,528	-		AO356_16855	0.61	+0.9
3,800,697	+		AO356_16855	0.75	-0.2
3,800,756	+		AO356_16855	0.80	-0.2
3,800,756	+		AO356_16855	0.80	-0.6
3,800,757	-		AO356_16855	0.80	+0.5
3,800,757	-		AO356_16855	0.80	+0.7
3,800,757	-		AO356_16855	0.80	+0.1
3,800,757	-		AO356_16855	0.80	+0.0
3,800,757	-		AO356_16855	0.80	-0.4
3,800,815	+		AO356_16855	0.84	-1.2
3,800,890	+				-0.9
3,800,891	-				-0.4
3,800,891	-				+0.6
3,800,891	-				-0.5
3,800,932	+				-0.8
3,800,932	+				-0.3
3,800,932	+				-0.8
3,800,932	+				-1.0
3,800,932	+				-0.2
3,800,932	+				-0.2
3,800,933	-				-0.3
3,800,933	-				-0.3
3,800,935	+				-2.0
3,800,935	+				-0.1
3,800,935	+				-0.2
3,800,935	+				-0.4
3,800,935	+				-0.4
3,800,935	+				-0.6
3,800,935	+				-0.7
3,800,935	+				+0.3
3,800,935	+				-1.9
3,800,936	-				+0.7
3,800,936	-				+0.9
3,800,936	-				-0.4
3,800,936	-				+0.1
3,800,956	+				-0.7
3,800,957	-				+0.3
3,800,985	+				-0.9
3,800,985	+				-0.1
3,800,985	+				-0.7
3,800,985	+				-0.6
3,800,985	+				-0.7
3,800,985	+				-0.4
3,800,985	+				-2.3
3,800,985	+				-0.3
3,800,985	+				-1.1
3,800,985	+				-0.5
3,800,986	-				-0.0
3,800,986	-				-0.0
3,800,986	-				-0.4
3,800,986	-				-0.5
3,800,986	-				+0.3
3,800,986	-				-1.0
3,800,986	-				-0.3
3,800,986	-				+0.1
3,800,986	-				-1.0
3,800,986	-				-0.1
3,800,986	-				+0.2
3,800,986	-				-0.8
3,800,986	-				-0.5
3,800,986	-				+0.2
3,800,986	-				-0.9
3,800,986	-				-0.5
3,800,986	-				-0.1
3,800,986	-				+0.8
3,800,989	+				-0.7
3,800,989	+				-0.4
3,800,989	+				-1.2
3,800,989	+				-0.9
3,800,989	+				-0.8
3,800,989	+				-1.9
3,800,989	+				+0.2
3,800,989	+				-0.2
3,800,989	+				+0.2
3,800,989	+				+1.4
3,800,989	+				+0.1
3,800,989	+				-0.5
3,800,989	+				-0.4
3,800,989	+				-1.1
3,800,990	-				+0.3
3,800,990	-				-1.0
3,800,990	-				-1.1
3,800,990	-				-0.0
3,800,990	-				-0.3
3,800,990	-				-0.6
3,800,990	-				-0.0
3,800,990	-				-1.1
3,800,990	-				-0.5
3,800,990	-				-0.7
3,800,990	-				-0.1
3,800,990	-				-0.5
3,800,990	-				-0.6
3,800,990	-				-1.1
3,800,999	-				-1.4
3,801,028	+				-0.4
3,801,028	+				-1.2
3,801,028	+				-0.2
3,801,029	-				-0.9
3,801,200	+		AO356_16860	0.22	-1.0
3,801,200	+		AO356_16860	0.22	-0.6
3,801,200	+		AO356_16860	0.22	-1.1
3,801,200	+		AO356_16860	0.22	-1.0
3,801,201	-		AO356_16860	0.22	-1.3
3,801,201	-		AO356_16860	0.22	+0.5
3,801,358	+		AO356_16860	0.58	-0.0
3,801,358	+		AO356_16860	0.58	-1.6
3,801,401	+		AO356_16860	0.68	-0.8
3,801,401	+		AO356_16860	0.68	-0.6
3,801,401	+		AO356_16860	0.68	-0.1
3,801,401	+		AO356_16860	0.68	+0.6
3,801,401	+		AO356_16860	0.68	-0.6
3,801,401	+		AO356_16860	0.68	+0.1
3,801,401	+		AO356_16860	0.68	-1.9
3,801,401	+		AO356_16860	0.68	-0.4
3,801,401	+		AO356_16860	0.68	-2.6
3,801,401	+		AO356_16860	0.68	-0.4
3,801,401	+		AO356_16860	0.68	-1.0
3,801,402	-		AO356_16860	0.69	+0.8
3,801,402	-		AO356_16860	0.69	-0.9
3,801,402	-		AO356_16860	0.69	+0.9
3,801,402	-		AO356_16860	0.69	-0.1
3,801,402	-		AO356_16860	0.69	+0.6
3,801,402	-		AO356_16860	0.69	-0.8
3,801,440	+		AO356_16860	0.77	-0.3
3,801,441	-		AO356_16860	0.78	-0.3
3,801,441	-		AO356_16860	0.78	-0.2
3,801,441	-		AO356_16860	0.78	-0.1
3,801,553	+				+0.1
3,801,553	+				-1.0
3,801,553	+				-0.1
3,801,553	+				+0.1
3,801,554	-				-0.0
3,801,554	-				+0.4
3,801,554	-				-1.4
3,801,554	-				+0.8
3,801,554	-				-0.3
3,801,644	+				-0.2
3,801,644	+				-0.6
3,801,644	+				-0.1
3,801,644	+				-0.1
3,801,645	-				+0.3
3,801,645	-				+0.0
3,801,765	+		AO356_16865	0.17	+0.3
3,801,766	-		AO356_16865	0.17	+1.4
3,801,766	-		AO356_16865	0.17	+0.6
3,801,840	+		AO356_16865	0.23	-0.5
3,801,840	+		AO356_16865	0.23	+0.4
3,801,840	+		AO356_16865	0.23	-0.0
3,801,840	+		AO356_16865	0.23	-1.6
3,801,840	+		AO356_16865	0.23	+0.4
3,801,841	-		AO356_16865	0.24	-0.4
3,801,841	-		AO356_16865	0.24	+0.4