Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20095 and AO353_20100 are separated by 122 nucleotides AO353_20100 and AO353_20105 are separated by 87 nucleotides
AO353_20095: AO353_20095 - histidine kinase, at 4,419,872 to 4,421,203
_20095
AO353_20100: AO353_20100 - hypothetical protein, at 4,421,326 to 4,421,835
_20100
AO353_20105: AO353_20105 - serine/threonine protein kinase, at 4,421,923 to 4,423,155
_20105
Position (kb)
4421
4422 Strain fitness (log2 ratio)
-2
-1
0
1 at 4420.662 kb on + strand, within AO353_20095 at 4420.780 kb on - strand, within AO353_20095 at 4420.990 kb on - strand, within AO353_20095 at 4421.214 kb on + strand at 4421.215 kb on - strand at 4421.215 kb on - strand at 4421.215 kb on - strand at 4421.215 kb on - strand at 4421.270 kb on + strand at 4421.270 kb on + strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.271 kb on - strand at 4421.273 kb on - strand at 4421.273 kb on - strand at 4421.273 kb on - strand at 4421.290 kb on - strand at 4421.314 kb on + strand at 4421.315 kb on - strand at 4421.315 kb on - strand at 4421.315 kb on - strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.331 kb on + strand at 4421.332 kb on - strand at 4421.332 kb on - strand at 4421.332 kb on - strand at 4421.332 kb on - strand at 4421.332 kb on - strand at 4421.332 kb on - strand at 4421.341 kb on + strand at 4421.342 kb on - strand at 4421.465 kb on - strand, within AO353_20100 at 4421.560 kb on + strand, within AO353_20100 at 4421.561 kb on - strand, within AO353_20100 at 4421.664 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.722 kb on + strand, within AO353_20100 at 4421.723 kb on - strand, within AO353_20100 at 4421.723 kb on - strand, within AO353_20100 at 4421.723 kb on - strand, within AO353_20100 at 4421.723 kb on - strand, within AO353_20100 at 4421.723 kb on - strand, within AO353_20100 at 4421.734 kb on + strand, within AO353_20100 at 4421.734 kb on + strand, within AO353_20100 at 4421.818 kb on + strand at 4421.818 kb on + strand at 4421.818 kb on + strand at 4421.818 kb on + strand at 4421.819 kb on - strand at 4421.819 kb on - strand at 4421.819 kb on - strand at 4421.834 kb on - strand at 4421.836 kb on + strand at 4421.852 kb on - strand at 4421.852 kb on - strand at 4421.886 kb on + strand at 4421.886 kb on + strand at 4421.887 kb on - strand at 4421.887 kb on - strand at 4421.914 kb on - strand at 4421.973 kb on + strand at 4421.974 kb on - strand at 4421.974 kb on - strand at 4422.296 kb on + strand, within AO353_20105 at 4422.296 kb on + strand, within AO353_20105 at 4422.296 kb on + strand, within AO353_20105 at 4422.297 kb on - strand, within AO353_20105 at 4422.297 kb on - strand, within AO353_20105 at 4422.297 kb on - strand, within AO353_20105 at 4422.297 kb on - strand, within AO353_20105 at 4422.443 kb on + strand, within AO353_20105 at 4422.443 kb on + strand, within AO353_20105 at 4422.496 kb on + strand, within AO353_20105 at 4422.497 kb on - strand, within AO353_20105 at 4422.497 kb on - strand, within AO353_20105 at 4422.640 kb on + strand, within AO353_20105 at 4422.641 kb on - strand, within AO353_20105 at 4422.705 kb on + strand, within AO353_20105
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,420,662 + AO353_20095 0.59 -1.8 4,420,780 - AO353_20095 0.68 -1.0 4,420,990 - AO353_20095 0.84 -2.2 4,421,214 + +0.7 4,421,215 - +0.0 4,421,215 - +0.2 4,421,215 - -1.4 4,421,215 - +0.3 4,421,270 + +0.0 4,421,270 + -0.2 4,421,271 - -0.4 4,421,271 - -1.1 4,421,271 - -0.0 4,421,271 - -0.2 4,421,271 - +0.2 4,421,271 - -1.3 4,421,271 - -0.6 4,421,273 - +1.2 4,421,273 - +1.0 4,421,273 - +1.2 4,421,290 - -0.5 4,421,314 + -0.2 4,421,315 - +0.2 4,421,315 - +1.0 4,421,315 - +0.2 4,421,331 + +0.1 4,421,331 + +0.7 4,421,331 + +1.2 4,421,331 + +0.6 4,421,331 + +0.8 4,421,331 + +0.6 4,421,331 + +0.3 4,421,331 + -0.6 4,421,331 + +0.2 4,421,331 + -0.1 4,421,331 + -0.8 4,421,331 + +1.6 4,421,332 - -0.5 4,421,332 - -0.9 4,421,332 - -1.1 4,421,332 - +0.2 4,421,332 - +0.6 4,421,332 - +0.2 4,421,341 + +1.6 4,421,342 - -0.1 4,421,465 - AO353_20100 0.27 +1.1 4,421,560 + AO353_20100 0.46 -0.0 4,421,561 - AO353_20100 0.46 -0.0 4,421,664 + AO353_20100 0.66 +0.5 4,421,722 + AO353_20100 0.78 -0.6 4,421,722 + AO353_20100 0.78 -0.0 4,421,722 + AO353_20100 0.78 +0.4 4,421,722 + AO353_20100 0.78 +0.2 4,421,722 + AO353_20100 0.78 +1.0 4,421,722 + AO353_20100 0.78 -0.4 4,421,723 - AO353_20100 0.78 +1.2 4,421,723 - AO353_20100 0.78 +1.0 4,421,723 - AO353_20100 0.78 -0.2 4,421,723 - AO353_20100 0.78 -0.4 4,421,723 - AO353_20100 0.78 +0.6 4,421,734 + AO353_20100 0.80 +0.2 4,421,734 + AO353_20100 0.80 -0.2 4,421,818 + -1.6 4,421,818 + -0.5 4,421,818 + +0.7 4,421,818 + +0.6 4,421,819 - -2.1 4,421,819 - +1.4 4,421,819 - -0.8 4,421,834 - +0.8 4,421,836 + +1.6 4,421,852 - -0.7 4,421,852 - -1.6 4,421,886 + +0.8 4,421,886 + +0.3 4,421,887 - -0.9 4,421,887 - +0.1 4,421,914 - -1.4 4,421,973 + +0.1 4,421,974 - +0.2 4,421,974 - +0.4 4,422,296 + AO353_20105 0.30 +0.2 4,422,296 + AO353_20105 0.30 +0.3 4,422,296 + AO353_20105 0.30 -0.4 4,422,297 - AO353_20105 0.30 -0.9 4,422,297 - AO353_20105 0.30 -1.8 4,422,297 - AO353_20105 0.30 +0.4 4,422,297 - AO353_20105 0.30 +1.3 4,422,443 + AO353_20105 0.42 -0.1 4,422,443 + AO353_20105 0.42 +1.6 4,422,496 + AO353_20105 0.46 +0.6 4,422,497 - AO353_20105 0.47 -0.0 4,422,497 - AO353_20105 0.47 -0.0 4,422,640 + AO353_20105 0.58 -2.3 4,422,641 - AO353_20105 0.58 +1.7 4,422,705 + AO353_20105 0.63 +0.2
Or see this region's nucleotide sequence