Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5990

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
6,807,056	+		Pf6N2E2_5989	0.42	+1.3
6,807,056	+		Pf6N2E2_5989	0.42	+0.4
6,807,057	-		Pf6N2E2_5989	0.42	-1.4
6,807,095	-		Pf6N2E2_5989	0.45	-0.5
6,807,130	+		Pf6N2E2_5989	0.48	+0.5
6,807,295	+		Pf6N2E2_5989	0.59	-1.2
6,807,295	+		Pf6N2E2_5989	0.59	-0.2
6,807,295	+		Pf6N2E2_5989	0.59	-0.3
6,807,295	+		Pf6N2E2_5989	0.59	+0.7
6,807,295	+		Pf6N2E2_5989	0.59	-0.3
6,807,295	+		Pf6N2E2_5989	0.59	+0.7
6,807,295	+		Pf6N2E2_5989	0.59	-0.4
6,807,296	-		Pf6N2E2_5989	0.59	+0.8
6,807,296	-		Pf6N2E2_5989	0.59	+1.6
6,807,296	-		Pf6N2E2_5989	0.59	+0.0
6,807,296	-		Pf6N2E2_5989	0.59	+0.7
6,807,296	-		Pf6N2E2_5989	0.59	+1.6
6,807,296	-		Pf6N2E2_5989	0.59	-0.3
6,807,296	-		Pf6N2E2_5989	0.59	+0.9
6,807,299	+		Pf6N2E2_5989	0.59	+1.0
6,807,299	+		Pf6N2E2_5989	0.59	+0.4
6,807,299	+		Pf6N2E2_5989	0.59	-0.3
6,807,299	+		Pf6N2E2_5989	0.59	-0.8
6,807,299	+		Pf6N2E2_5989	0.59	-0.3
6,807,300	-		Pf6N2E2_5989	0.59	-0.4
6,807,300	-		Pf6N2E2_5989	0.59	-1.5
6,807,300	-		Pf6N2E2_5989	0.59	+0.4
6,807,300	-		Pf6N2E2_5989	0.59	+1.1
6,807,300	-		Pf6N2E2_5989	0.59	-0.2
6,807,347	+		Pf6N2E2_5989	0.63	+0.3
6,807,371	+		Pf6N2E2_5989	0.64	-1.2
6,807,371	+		Pf6N2E2_5989	0.64	+1.3
6,807,371	+		Pf6N2E2_5989	0.64	+0.6
6,807,372	-		Pf6N2E2_5989	0.64	+0.4
6,807,372	-		Pf6N2E2_5989	0.64	+0.8
6,807,372	-		Pf6N2E2_5989	0.64	-0.3
6,807,472	+		Pf6N2E2_5989	0.71	-0.0
6,807,515	+		Pf6N2E2_5989	0.74	-0.0
6,807,551	+		Pf6N2E2_5989	0.77	+0.2
6,807,551	+		Pf6N2E2_5989	0.77	+0.6
6,807,551	+		Pf6N2E2_5989	0.77	+0.8
6,807,551	+		Pf6N2E2_5989	0.77	-0.3
6,807,552	-		Pf6N2E2_5989	0.77	+0.8
6,807,552	-		Pf6N2E2_5989	0.77	+0.2
6,807,554	-		Pf6N2E2_5989	0.77	-0.3
6,807,566	+		Pf6N2E2_5989	0.78	-0.0
6,807,608	+		Pf6N2E2_5989	0.81	-0.0
6,807,608	+		Pf6N2E2_5989	0.81	-1.3
6,807,608	+		Pf6N2E2_5989	0.81	+1.0
6,807,608	+		Pf6N2E2_5989	0.81	+0.8
6,807,609	-		Pf6N2E2_5989	0.81	+0.3
6,807,609	-		Pf6N2E2_5989	0.81	+0.1
6,807,609	-		Pf6N2E2_5989	0.81	-1.9
6,807,609	-		Pf6N2E2_5989	0.81	+0.7
6,807,609	-		Pf6N2E2_5989	0.81	+0.1
6,807,884	+				+0.8
6,807,899	+				-0.4
6,807,927	+				-0.2
6,807,967	+				+0.0
6,807,968	-				-0.8
6,807,968	-				+0.5
6,807,968	-				-0.7
6,807,968	-				-0.3
6,807,968	-				+1.0
6,807,968	-				-1.4
6,807,968	-				-0.0
6,807,971	+				-1.0
6,807,971	+				-0.4
6,807,972	-				+0.2
6,808,040	-		Pf6N2E2_5990	0.14	-2.0
6,808,040	-		Pf6N2E2_5990	0.14	+0.2
6,808,446	+				+0.1
6,808,446	+				-0.9
6,808,446	+				-0.0
6,808,446	+				-0.9
6,808,447	-				+0.6
6,808,526	+				+0.4
6,808,526	+				-0.4
6,808,540	+				+0.2
6,808,541	-				-0.9
6,808,562	+				-0.8
6,808,563	-				-0.5
6,808,563	-				+1.5
6,808,566	-				+1.8
6,808,572	+				-0.5
6,808,573	-				+0.1
6,808,573	-				+0.1
6,808,573	-				+0.2
6,808,573	-				-0.0
6,808,653	+		Pf6N2E2_5991	0.22	-0.6
6,808,653	+		Pf6N2E2_5991	0.22	-0.8
6,808,654	-		Pf6N2E2_5991	0.22	+0.1
6,808,654	-		Pf6N2E2_5991	0.22	+0.3
6,808,849	+				-0.5
6,808,849	+				+1.6
6,808,850	-				-0.1
6,808,871	+				-0.0
6,808,871	+				-0.0
6,808,871	+				-0.4
6,808,872	-				+0.8
6,808,892	+				-1.8
6,808,893	-				-0.1
6,808,905	+				-1.1
6,808,905	+				+1.3
6,808,905	+				-0.4
6,808,905	+				+0.7
6,808,905	+				+0.9
6,808,923	+				-1.8
6,808,923	+				-0.3
6,808,924	-				+0.0
6,808,924	-				+0.6
6,808,924	-				+1.3
6,809,011	-		Pf6N2E2_5992	0.17	+0.7
6,809,047	+		Pf6N2E2_5992	0.23	-0.1
6,809,048	-		Pf6N2E2_5992	0.23	-0.3
6,809,048	-		Pf6N2E2_5992	0.23	+1.0
6,809,048	-		Pf6N2E2_5992	0.23	-1.6
6,809,048	-		Pf6N2E2_5992	0.23	-0.6
6,809,048	-		Pf6N2E2_5992	0.23	-0.8
6,809,194	+		Pf6N2E2_5992	0.47	-0.8
6,809,194	+		Pf6N2E2_5992	0.47	-1.1
6,809,194	+		Pf6N2E2_5992	0.47	-0.5
6,809,402	-		Pf6N2E2_5992	0.81	+0.0
6,809,432	+		Pf6N2E2_5992	0.86	+0.3
6,809,432	+		Pf6N2E2_5992	0.86	-0.3
6,809,433	-				-0.0
6,809,433	-		Pf6N2E2_5992	0.87	-0.6