Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5819 and Pf6N2E2_5820 are separated by 183 nucleotides Pf6N2E2_5820 and Pf6N2E2_5821 are separated by 107 nucleotides
Pf6N2E2_5819 - Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p, at 6,636,808 to 6,637,716
_5819
Pf6N2E2_5820 - FIG00957914: hypothetical protein, at 6,637,900 to 6,638,688
_5820
Pf6N2E2_5821 - Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase, at 6,638,796 to 6,639,758
_5821
Position (kb)
6637
6638
6639 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6636.974 kb on - strand, within Pf6N2E2_5819 at 6637.060 kb on + strand, within Pf6N2E2_5819 at 6637.060 kb on + strand, within Pf6N2E2_5819 at 6637.240 kb on + strand, within Pf6N2E2_5819 at 6637.240 kb on + strand, within Pf6N2E2_5819 at 6637.277 kb on + strand, within Pf6N2E2_5819 at 6637.278 kb on - strand, within Pf6N2E2_5819 at 6637.414 kb on + strand, within Pf6N2E2_5819 at 6637.414 kb on + strand, within Pf6N2E2_5819 at 6637.415 kb on - strand, within Pf6N2E2_5819 at 6637.415 kb on - strand, within Pf6N2E2_5819 at 6637.415 kb on - strand, within Pf6N2E2_5819 at 6637.454 kb on - strand, within Pf6N2E2_5819 at 6637.556 kb on + strand, within Pf6N2E2_5819 at 6637.556 kb on + strand, within Pf6N2E2_5819 at 6637.557 kb on - strand, within Pf6N2E2_5819 at 6638.189 kb on + strand, within Pf6N2E2_5820 at 6638.190 kb on - strand, within Pf6N2E2_5820 at 6638.190 kb on - strand, within Pf6N2E2_5820 at 6638.320 kb on - strand, within Pf6N2E2_5820 at 6638.516 kb on + strand, within Pf6N2E2_5820 at 6638.688 kb on + strand at 6638.688 kb on + strand at 6638.788 kb on - strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.876 kb on - strand at 6638.930 kb on + strand, within Pf6N2E2_5821 at 6639.091 kb on + strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.099 kb on + strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.573 kb on - strand, within Pf6N2E2_5821
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 6,636,974 - Pf6N2E2_5819 0.18 -0.8 6,637,060 + Pf6N2E2_5819 0.28 +1.0 6,637,060 + Pf6N2E2_5819 0.28 +0.0 6,637,240 + Pf6N2E2_5819 0.48 -0.4 6,637,240 + Pf6N2E2_5819 0.48 -0.4 6,637,277 + Pf6N2E2_5819 0.52 -0.2 6,637,278 - Pf6N2E2_5819 0.52 -2.2 6,637,414 + Pf6N2E2_5819 0.67 +0.1 6,637,414 + Pf6N2E2_5819 0.67 -0.1 6,637,415 - Pf6N2E2_5819 0.67 +0.4 6,637,415 - Pf6N2E2_5819 0.67 +0.5 6,637,415 - Pf6N2E2_5819 0.67 -1.4 6,637,454 - Pf6N2E2_5819 0.71 +0.4 6,637,556 + Pf6N2E2_5819 0.82 -0.2 6,637,556 + Pf6N2E2_5819 0.82 +0.1 6,637,557 - Pf6N2E2_5819 0.82 -0.7 6,638,189 + Pf6N2E2_5820 0.37 -1.6 6,638,190 - Pf6N2E2_5820 0.37 -1.9 6,638,190 - Pf6N2E2_5820 0.37 -0.3 6,638,320 - Pf6N2E2_5820 0.53 -0.4 6,638,516 + Pf6N2E2_5820 0.78 +0.6 6,638,688 + -0.3 6,638,688 + -0.7 6,638,788 - -0.4 6,638,875 + +0.6 6,638,875 + +0.3 6,638,875 + +0.4 6,638,875 + +1.9 6,638,875 + -0.4 6,638,875 + +0.1 6,638,876 - -0.8 6,638,930 + Pf6N2E2_5821 0.14 -0.3 6,639,091 + Pf6N2E2_5821 0.31 +0.9 6,639,092 - Pf6N2E2_5821 0.31 -0.3 6,639,092 - Pf6N2E2_5821 0.31 -0.3 6,639,092 - Pf6N2E2_5821 0.31 +0.4 6,639,099 + Pf6N2E2_5821 0.31 +0.3 6,639,100 - Pf6N2E2_5821 0.32 -0.4 6,639,100 - Pf6N2E2_5821 0.32 -0.4 6,639,100 - Pf6N2E2_5821 0.32 +1.3 6,639,406 + Pf6N2E2_5821 0.63 +0.4 6,639,406 + Pf6N2E2_5821 0.63 -0.9 6,639,406 + Pf6N2E2_5821 0.63 +0.3 6,639,406 + Pf6N2E2_5821 0.63 -0.1 6,639,406 + Pf6N2E2_5821 0.63 -1.5 6,639,406 + Pf6N2E2_5821 0.63 -0.5 6,639,406 + Pf6N2E2_5821 0.63 -0.1 6,639,406 + Pf6N2E2_5821 0.63 +1.9 6,639,406 + Pf6N2E2_5821 0.63 -0.4 6,639,407 - Pf6N2E2_5821 0.63 +0.0 6,639,407 - Pf6N2E2_5821 0.63 -0.5 6,639,407 - Pf6N2E2_5821 0.63 -0.9 6,639,407 - Pf6N2E2_5821 0.63 +0.1 6,639,407 - Pf6N2E2_5821 0.63 +0.6 6,639,573 - Pf6N2E2_5821 0.81 +0.1
Or see this region's nucleotide sequence