Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3471

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
4,051,778	+		Pf6N2E2_3469	0.66	+0.2
4,051,778	+		Pf6N2E2_3469	0.66	-0.2
4,051,778	+		Pf6N2E2_3469	0.66	+1.1
4,051,793	+		Pf6N2E2_3469	0.68	+1.0
4,051,793	+		Pf6N2E2_3469	0.68	+0.3
4,051,794	-		Pf6N2E2_3469	0.68	+1.2
4,051,794	-		Pf6N2E2_3469	0.68	+0.4
4,051,898	+		Pf6N2E2_3469	0.79	+1.6
4,051,898	+		Pf6N2E2_3469	0.79	-0.5
4,052,045	+				+0.0
4,052,092	+				+0.3
4,052,092	+				-0.3
4,052,092	+				-0.3
4,052,092	+				-0.9
4,052,092	+				-1.0
4,052,093	-				-0.9
4,052,093	-				+0.5
4,052,093	-				-0.1
4,052,093	-				-0.5
4,052,143	+				+0.3
4,052,143	+				+0.7
4,052,143	+				-1.6
4,052,143	+				-2.6
4,052,144	-				-0.3
4,052,144	-				+0.3
4,052,144	-				-0.7
4,052,278	+		Pf6N2E2_3470	0.31	+0.0
4,052,279	-		Pf6N2E2_3470	0.31	-0.4
4,052,279	-		Pf6N2E2_3470	0.31	-0.2
4,052,279	-		Pf6N2E2_3470	0.31	-0.1
4,052,320	+		Pf6N2E2_3470	0.41	-0.8
4,052,320	+		Pf6N2E2_3470	0.41	-0.6
4,052,321	-		Pf6N2E2_3470	0.41	+0.3
4,052,329	+		Pf6N2E2_3470	0.43	+1.2
4,052,329	+		Pf6N2E2_3470	0.43	-1.1
4,052,448	+		Pf6N2E2_3470	0.70	+0.2
4,052,449	-		Pf6N2E2_3470	0.70	+1.3
4,052,449	-		Pf6N2E2_3470	0.70	+0.4
4,052,560	+				-0.1
4,052,579	+				+0.0
4,052,579	+				-0.3
4,052,579	+				-0.5
4,052,579	+				-0.6
4,052,580	-				-1.6
4,052,580	-				-0.1
4,052,580	-				-0.9
4,052,595	+				-0.0
4,052,595	+				+0.4
4,052,596	-				-0.4
4,052,596	-				-0.5
4,052,596	-				+0.8
4,052,678	+				+1.2
4,052,719	+		Pf6N2E2_3471	0.16	-0.4
4,052,720	-		Pf6N2E2_3471	0.17	-1.3
4,052,803	+		Pf6N2E2_3471	0.40	-0.8
4,052,803	+		Pf6N2E2_3471	0.40	-3.1
4,052,803	+		Pf6N2E2_3471	0.40	+0.2
4,052,803	+		Pf6N2E2_3471	0.40	-1.4
4,052,804	-		Pf6N2E2_3471	0.40	-0.2
4,052,804	-		Pf6N2E2_3471	0.40	+0.1
4,052,804	-		Pf6N2E2_3471	0.40	-1.3
4,052,804	-		Pf6N2E2_3471	0.40	-1.0
4,052,804	-		Pf6N2E2_3471	0.40	-0.1
4,052,940	+		Pf6N2E2_3471	0.79	-1.5
4,053,003	-				+1.4
4,053,003	-				+0.1
4,053,485	+		Pf6N2E2_3472	0.65	+0.0
4,053,485	+		Pf6N2E2_3472	0.65	+0.4
4,053,485	+		Pf6N2E2_3472	0.65	+0.8
4,053,485	+		Pf6N2E2_3472	0.65	-1.3
4,053,485	+		Pf6N2E2_3472	0.65	+0.0
4,053,485	+		Pf6N2E2_3472	0.65	+0.8
4,053,486	-		Pf6N2E2_3472	0.65	+1.4
4,053,698	+				+0.6
4,053,698	+				+0.3
4,053,698	+				+0.3
4,053,698	+				+0.7
4,053,699	-				-1.7
4,053,699	-				-0.2
4,053,771	+				+0.4
4,053,771	+				+0.6
4,053,771	+				+0.1
4,053,771	+				+0.2
4,053,771	+				+0.0
4,053,772	-				-1.4
4,053,772	-				+0.8
4,053,772	-				-0.4
4,053,797	+				-0.4
4,053,797	+				-0.4
4,053,797	+				+0.6
4,053,871	-				+0.4
4,053,986	+				+0.0
4,053,987	-				+0.4