Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1788

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
2,114,039	+		Pf6N2E2_1787	0.29	-0.7
2,114,152	+		Pf6N2E2_1787	0.38	-0.2
2,114,170	+		Pf6N2E2_1787	0.39	-1.4
2,114,219	-		Pf6N2E2_1787	0.43	+0.4
2,114,219	-		Pf6N2E2_1787	0.43	+0.5
2,114,289	+		Pf6N2E2_1787	0.49	-0.7
2,114,290	-		Pf6N2E2_1787	0.49	+0.2
2,114,302	+		Pf6N2E2_1787	0.50	-0.4
2,114,302	+		Pf6N2E2_1787	0.50	-0.7
2,114,303	-		Pf6N2E2_1787	0.50	-0.5
2,114,360	-		Pf6N2E2_1787	0.55	-1.1
2,114,360	-		Pf6N2E2_1787	0.55	-1.1
2,114,454	-		Pf6N2E2_1787	0.62	-0.5
2,114,542	+		Pf6N2E2_1787	0.69	-0.4
2,114,543	-		Pf6N2E2_1787	0.69	+0.2
2,114,602	+		Pf6N2E2_1787	0.74	-0.5
2,114,602	+		Pf6N2E2_1787	0.74	-0.1
2,114,603	-		Pf6N2E2_1787	0.74	+1.9
2,114,633	-		Pf6N2E2_1787	0.76	-1.1
2,114,633	-		Pf6N2E2_1787	0.76	-1.5
2,114,784	+		Pf6N2E2_1787	0.88	-0.5
2,114,845	+				+0.9
2,114,845	+				+1.8
2,114,845	+				-1.2
2,114,846	-				+0.5
2,114,863	+				-1.1
2,114,864	-				+0.3
2,114,930	+				+0.9
2,114,985	+				-0.6
2,114,985	+				+0.2
2,115,073	-				-0.6
2,115,234	+		Pf6N2E2_1788	0.25	-1.2
2,115,276	+		Pf6N2E2_1788	0.30	-1.1
2,115,277	-		Pf6N2E2_1788	0.30	-2.0
2,115,374	+		Pf6N2E2_1788	0.40	+0.9
2,115,374	+		Pf6N2E2_1788	0.40	+1.2
2,115,375	-		Pf6N2E2_1788	0.40	-2.0
2,115,375	-		Pf6N2E2_1788	0.40	-0.4
2,115,375	-		Pf6N2E2_1788	0.40	+0.0
2,115,375	-		Pf6N2E2_1788	0.40	-1.1
2,115,398	-		Pf6N2E2_1788	0.42	-0.2
2,115,514	+		Pf6N2E2_1788	0.55	+0.7
2,115,515	-		Pf6N2E2_1788	0.55	-0.3
2,115,517	+		Pf6N2E2_1788	0.55	+0.8
2,115,517	+		Pf6N2E2_1788	0.55	+0.6
2,115,518	-		Pf6N2E2_1788	0.55	-2.6
2,115,869	+				-0.3
2,115,870	-				-0.2
2,115,870	-				-0.4
2,115,929	+				+1.2
2,115,929	+				-0.1
2,115,929	+				-0.4
2,115,978	-				-0.0
2,116,003	+				-0.3
2,116,003	+				+1.2
2,116,147	-				-0.9
2,116,260	-		Pf6N2E2_1789	0.15	-0.5
2,116,260	-		Pf6N2E2_1789	0.15	+1.6
2,116,260	-		Pf6N2E2_1789	0.15	-0.8
2,116,327	+		Pf6N2E2_1789	0.19	-0.0
2,116,328	-		Pf6N2E2_1789	0.19	-0.3
2,116,431	+		Pf6N2E2_1789	0.25	+0.5
2,116,507	-		Pf6N2E2_1789	0.29	+1.1
2,116,507	-		Pf6N2E2_1789	0.29	+0.4
2,116,507	-		Pf6N2E2_1789	0.29	-0.9
2,116,745	+		Pf6N2E2_1789	0.42	-1.2
2,116,745	+		Pf6N2E2_1789	0.42	-1.9
2,116,746	-		Pf6N2E2_1789	0.42	+1.5
2,116,832	+		Pf6N2E2_1789	0.46	+0.3
2,116,832	+		Pf6N2E2_1789	0.46	+0.0
2,116,832	+		Pf6N2E2_1789	0.46	+0.6
2,116,832	+		Pf6N2E2_1789	0.46	+0.6
2,116,832	+		Pf6N2E2_1789	0.46	-1.4
2,116,832	+		Pf6N2E2_1789	0.46	-0.2
2,116,832	+		Pf6N2E2_1789	0.46	-0.4
2,116,832	+		Pf6N2E2_1789	0.46	-0.5
2,116,832	+		Pf6N2E2_1789	0.46	+0.0
2,116,833	-		Pf6N2E2_1789	0.47	+1.8
2,116,860	+		Pf6N2E2_1789	0.48	-1.9
2,116,860	+		Pf6N2E2_1789	0.48	-0.9
2,116,860	+		Pf6N2E2_1789	0.48	-1.1
2,116,860	+		Pf6N2E2_1789	0.48	+0.3
2,116,860	+		Pf6N2E2_1789	0.48	-0.1
2,116,886	+		Pf6N2E2_1789	0.49	+1.7
2,116,886	+		Pf6N2E2_1789	0.49	-0.3