Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1666

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
1,971,427	+		Pf6N2E2_1664	0.61	+1.2
1,971,509	+		Pf6N2E2_1664	0.67	-1.4
1,971,510	-		Pf6N2E2_1664	0.67	-0.2
1,971,518	+		Pf6N2E2_1664	0.67	+0.2
1,971,519	-		Pf6N2E2_1664	0.67	+0.0
1,971,519	-		Pf6N2E2_1664	0.67	+0.1
1,971,578	+		Pf6N2E2_1664	0.72	-0.1
1,971,578	+		Pf6N2E2_1664	0.72	+0.2
1,971,578	+		Pf6N2E2_1664	0.72	+1.8
1,971,578	+		Pf6N2E2_1664	0.72	+0.7
1,971,579	-		Pf6N2E2_1664	0.72	+1.3
1,971,579	-		Pf6N2E2_1664	0.72	+0.8
1,971,579	-		Pf6N2E2_1664	0.72	+0.4
1,971,630	-		Pf6N2E2_1664	0.75	+0.9
1,971,770	+		Pf6N2E2_1664	0.86	-0.2
1,971,770	+		Pf6N2E2_1664	0.86	+0.8
1,971,770	+		Pf6N2E2_1664	0.86	+0.3
1,971,770	+		Pf6N2E2_1664	0.86	+0.5
1,971,771	-		Pf6N2E2_1664	0.86	+0.1
1,971,854	+				+0.3
1,971,854	+				-0.4
1,971,855	-				-0.5
1,971,899	+				-0.1
1,971,900	-				-0.7
1,971,974	+				-0.5
1,971,975	-				-0.7
1,971,975	-				+1.0
1,971,975	-				+0.6
1,972,041	+		Pf6N2E2_1665	0.51	+0.5
1,972,041	+		Pf6N2E2_1665	0.51	+0.2
1,972,041	+		Pf6N2E2_1665	0.51	+0.0
1,972,041	+		Pf6N2E2_1665	0.51	-0.2
1,972,042	-		Pf6N2E2_1665	0.52	-0.2
1,972,131	+				+0.2
1,972,131	+				-0.0
1,972,131	+				-0.6
1,972,131	+				+1.6
1,972,206	+				+1.2
1,972,239	+				-1.5
1,972,709	+		Pf6N2E2_1666	0.41	+0.6
1,972,710	-		Pf6N2E2_1666	0.41	+0.9
1,972,710	-		Pf6N2E2_1666	0.41	+0.8
1,972,839	+		Pf6N2E2_1666	0.55	-0.1
1,973,028	-		Pf6N2E2_1666	0.75	+0.8
1,973,035	+		Pf6N2E2_1666	0.76	+1.0
1,973,118	+		Pf6N2E2_1666	0.85	+1.9
1,973,266	+				+0.4
1,973,312	-				+0.8
1,973,342	+				-0.3
1,973,343	-				+0.0
1,973,356	+				+0.6
1,973,390	+				+0.3
1,973,390	+				-0.1
1,973,390	+				-1.7
1,973,390	+				-0.0
1,973,390	+				-0.9
1,973,391	-				-1.2
1,973,391	-				+0.1
1,973,391	-				-1.5
1,973,402	+				-0.3
1,973,403	-				+1.5
1,973,503	+		Pf6N2E2_1667	0.11	+0.6
1,973,504	-		Pf6N2E2_1667	0.11	+0.9
1,973,504	-		Pf6N2E2_1667	0.11	-0.9
1,973,865	-		Pf6N2E2_1667	0.41	-1.3
1,974,224	-		Pf6N2E2_1667	0.72	-0.2