Experiment: Minimal media pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10035 and AO356_10040 are separated by 209 nucleotides AO356_10040 and AO356_10045 overlap by 4 nucleotides AO356_10045 and AO356_10050 overlap by 4 nucleotides
AO356_10035: AO356_10035 - hypothetical protein, at 2,263,308 to 2,266,220
_10035
AO356_10040: AO356_10040 - dTDP-glucose 4,6-dehydratase, at 2,266,430 to 2,267,512
_10040
AO356_10045: AO356_10045 - glucose-1-phosphate thymidylyltransferase, at 2,267,509 to 2,268,384
_10045
AO356_10050: AO356_10050 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 2,268,381 to 2,268,926
_10050
Position (kb)
2266
2267
2268 Strain fitness (log2 ratio)
-1
0
1
2 at 2265.495 kb on - strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.703 kb on + strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.704 kb on - strand, within AO356_10035 at 2265.820 kb on - strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.871 kb on + strand, within AO356_10035 at 2265.872 kb on - strand, within AO356_10035 at 2265.872 kb on - strand, within AO356_10035 at 2266.011 kb on + strand at 2266.011 kb on + strand at 2266.011 kb on + strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.012 kb on - strand at 2266.027 kb on + strand at 2266.027 kb on + strand at 2266.027 kb on + strand at 2266.028 kb on - strand at 2266.081 kb on + strand at 2266.081 kb on + strand at 2266.081 kb on + strand at 2266.133 kb on - strand at 2266.208 kb on + strand at 2266.209 kb on - strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.220 kb on + strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.221 kb on - strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.255 kb on + strand at 2266.256 kb on - strand at 2266.256 kb on - strand at 2266.256 kb on - strand at 2266.278 kb on + strand at 2266.279 kb on - strand at 2266.279 kb on - strand at 2266.301 kb on + strand at 2266.326 kb on + strand at 2266.327 kb on - strand at 2266.350 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.385 kb on + strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.386 kb on - strand at 2266.394 kb on + strand at 2266.394 kb on + strand at 2266.394 kb on + strand at 2266.395 kb on - strand at 2266.395 kb on - strand at 2266.395 kb on - strand at 2266.423 kb on + strand at 2267.462 kb on + strand at 2267.462 kb on + strand at 2267.463 kb on - strand at 2267.463 kb on - strand at 2267.463 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal media pH7 remove 2,265,495 - AO356_10035 0.75 +0.6 2,265,703 + AO356_10035 0.82 +0.8 2,265,703 + AO356_10035 0.82 +0.3 2,265,703 + AO356_10035 0.82 -0.5 2,265,703 + AO356_10035 0.82 +0.1 2,265,704 - AO356_10035 0.82 +0.5 2,265,704 - AO356_10035 0.82 +0.7 2,265,704 - AO356_10035 0.82 +1.2 2,265,704 - AO356_10035 0.82 +0.3 2,265,704 - AO356_10035 0.82 +1.0 2,265,704 - AO356_10035 0.82 +0.1 2,265,704 - AO356_10035 0.82 -0.4 2,265,704 - AO356_10035 0.82 +0.5 2,265,820 - AO356_10035 0.86 +0.3 2,265,871 + AO356_10035 0.88 +0.2 2,265,871 + AO356_10035 0.88 +1.3 2,265,871 + AO356_10035 0.88 +0.9 2,265,871 + AO356_10035 0.88 -0.6 2,265,872 - AO356_10035 0.88 -0.6 2,265,872 - AO356_10035 0.88 +1.1 2,266,011 + +0.7 2,266,011 + +0.5 2,266,011 + +0.1 2,266,012 - -0.2 2,266,012 - -0.2 2,266,012 - -0.8 2,266,012 - -0.0 2,266,012 - +0.3 2,266,027 + +0.5 2,266,027 + +0.7 2,266,027 + -1.2 2,266,028 - -0.4 2,266,081 + -0.7 2,266,081 + -0.2 2,266,081 + +0.6 2,266,133 - +0.2 2,266,208 + -0.7 2,266,209 - -0.7 2,266,220 + +0.5 2,266,220 + -0.4 2,266,220 + +0.8 2,266,220 + +2.5 2,266,220 + +0.8 2,266,220 + -0.5 2,266,220 + +0.2 2,266,220 + +0.5 2,266,220 + -0.2 2,266,220 + +0.3 2,266,220 + +0.8 2,266,221 - +0.4 2,266,221 - +0.4 2,266,221 - +0.7 2,266,221 - +0.6 2,266,221 - -1.4 2,266,221 - +1.0 2,266,221 - +0.7 2,266,221 - +0.2 2,266,221 - -1.0 2,266,255 + +0.1 2,266,255 + -1.0 2,266,255 + +0.0 2,266,255 + -0.4 2,266,255 + -0.5 2,266,255 + +0.3 2,266,256 - +0.1 2,266,256 - -0.4 2,266,256 - +1.0 2,266,278 + +0.7 2,266,279 - +0.2 2,266,279 - +0.6 2,266,301 + -0.3 2,266,326 + -0.4 2,266,327 - +0.8 2,266,350 + +1.4 2,266,385 + +0.2 2,266,385 + +0.1 2,266,385 + +0.3 2,266,385 + -0.1 2,266,385 + +0.4 2,266,385 + -0.2 2,266,385 + +0.6 2,266,386 - +0.7 2,266,386 - +0.2 2,266,386 - +0.3 2,266,386 - +0.4 2,266,386 - +0.5 2,266,386 - -0.3 2,266,386 - -1.3 2,266,386 - +0.2 2,266,394 + +0.4 2,266,394 + -0.1 2,266,394 + -0.1 2,266,395 - +0.4 2,266,395 - -0.1 2,266,395 - -0.4 2,266,423 + +0.8 2,267,462 + -0.1 2,267,462 + -0.1 2,267,463 - +0.3 2,267,463 - +1.1 2,267,463 - -0.3
Or see this region's nucleotide sequence